RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC4	YER147C	NPL4	P33755	580 aa		13.61	□□□□□ -0.23
SCC4	YER147C	NOC2	P39744	710 aa	Known RBP	13.61	□□□□□ -0.23
SCC4	YER147C	RPN11	P43588	306 aa	Known RBP	13.61	□□□□□ -0.23
SCC4	YER147C	IOC3	P43596	787 aa		13.61	□□□□□ -0.23
SCC4	YER147C	WAR1	Q03631	944 aa		13.61	□□□□□ -0.23
SCC4	YER147C	HXK1	P04806	485 aa	Known RBP	13.6	□□□□□ -0.23
SCC4	YER147C	RGP1	P16664	663 aa		13.6	□□□□□ -0.23
SCC4	YER147C	COQ1	P18900	473 aa		13.6	□□□□□ -0.23
SCC4	YER147C	HCA4	P20448	770 aa	Known RBP	13.6	□□□□□ -0.23
SCC4	YER147C	RRP8	P38961	392 aa	Known RBP	13.6	□□□□□ -0.23
SCC4	YER147C	NUG1	P40010	520 aa	Known RBP	13.6	□□□□□ -0.23
SCC4	YER147C	MGM1	P32266	881 aa		13.59	□□□□□ -0.23
SCC4	YER147C	GRX7	P38068	203 aa		13.59	□□□□□ -0.23
SCC4	YER147C	RPN10	P38886	268 aa	Known RBP	13.59	□□□□□ -0.23
SCC4	YER147C	MCM4	P30665	933 aa	Known RBP	13.59	□□□□□ -0.23
SCC4	YER147C	AKR1	P39010	764 aa		13.59	□□□□□ -0.23
SCC4	YER147C	TFC8	Q12308	588 aa		13.59	□□□□□ -0.23
SCC4	YER147C	FAS2	P19097	1887 aa	Known RBP	13.59	□□□□□ -0.23
SCC4	YER147C	GEF1	P37020	779 aa		13.58	□□□□□ -0.24
SCC4	YER147C	YIR042C	P40586	236 aa		13.58	□□□□□ -0.24
SCC4	YER147C	INM2	Q05533	292 aa		13.58	□□□□□ -0.24
SCC4	YER147C	FAR11	P53917	953 aa		13.57	□□□□□ -0.24
SCC4	YER147C	DPH6	Q12429	685 aa		13.57	□□□□□ -0.24
SCC4	YER147C	CYB2	P00175	591 aa		13.57	□□□□□ -0.24
SCC4	YER147C	TCD1	P38756	429 aa		13.57	□□□□□ -0.24
SCC4	YER147C	DCS2	Q12123	353 aa		13.57	□□□□□ -0.24
SCC4	YER147C	BMH2	P34730	273 aa	Known RBP	13.56	□□□□□ -0.24
SCC4	YER147C	CEP3	P40969	608 aa		13.56	□□□□□ -0.24
SCC4	YER147C	CTH1	P47976	325 aa		13.56	□□□□□ -0.24
SCC4	YER147C	SFI1	Q12369	946 aa		13.56	□□□□□ -0.24
SCC4	YER147C	CHO2	P05374	869 aa	Known RBP	13.55	□□□□□ -0.24
SCC4	YER147C	RPL22A	P05749	121 aa	Known RBP	13.55	□□□□□ -0.24
SCC4	YER147C	SWI4	P25302	1093 aa	Known RBP	13.55	□□□□□ -0.24
SCC4	YER147C	YIL055C	P40523	627 aa	Known RBP	13.55	□□□□□ -0.24
SCC4	YER147C	UFD2	P54860	961 aa		13.55	□□□□□ -0.24
SCC4	YER147C	DIB1	Q06819	143 aa	Predicted RBP	13.55	□□□□□ -0.24
SCC4	YER147C	SSA2	P10592	639 aa	Known RBP	13.55	□□□□□ -0.24
SCC4	YER147C	ICP55	P40051	511 aa		13.55	□□□□□ -0.24
SCC4	YER147C	CTI6	Q08923	506 aa		13.55	□□□□□ -0.24
SCC4	YER147C	BUG1	Q12191	341 aa		13.55	□□□□□ -0.24
SCC4	YER147C	NPR2	P39923	615 aa		13.54	□□□□□ -0.24
SCC4	YER147C	YFR006W	P43590	535 aa		13.54	□□□□□ -0.24
SCC4	YER147C	RPS15	Q01855	142 aa	Known RBP	13.54	□□□□□ -0.24
SCC4	YER147C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected
SCC4	YER147C	TFC6	Q06339	672 aa		13.53	□□□□□ -0.24
SCC4	YER147C	CDC6	P09119	513 aa		13.53	□□□□□ -0.24
SCC4	YER147C	SPC110	P32380	944 aa		13.53	□□□□□ -0.24
SCC4	YER147C	PSY4	P38193	441 aa		13.53	□□□□□ -0.24
SCC4	YER147C	SYF1	Q04048	859 aa	Predicted RBP	13.53	□□□□□ -0.24
SCC4	YER147C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.53	□□□□□ -0.24	not detected
SCC4	YER147C	CUE3	P53137	624 aa	Known RBP	13.52	□□□□□ -0.25
SCC4	YER147C	HDA1	P53973	706 aa		13.52	□□□□□ -0.25
SCC4	YER147C	GET3	Q12154	354 aa	Known RBP	13.52	□□□□□ -0.25
SCC4	YER147C	URA1	P28272	314 aa	Predicted RBP	13.51	□□□□□ -0.25
SCC4	YER147C	VPS1	P21576	704 aa	Known RBP	13.5	□□□□□ -0.25
SCC4	YER147C	BOI1	P38041	980 aa	Known RBP	13.5	□□□□□ -0.25
SCC4	YER147C	VPS75	P53853	264 aa		13.5	□□□□□ -0.25
SCC4	YER147C	LTV1	P34078	463 aa		13.49	□□□□□ -0.25
SCC4	YER147C	PTK2	P47116	818 aa	Known RBP	13.49	□□□□□ -0.25
SCC4	YER147C	UTP22	P53254	1237 aa	Predicted RBP	13.49	□□□□□ -0.25
SCC4	YER147C	TMA16	Q08687	178 aa		13.49	□□□□□ -0.25
SCC4	YER147C	ASF1	P32447	279 aa		13.48	□□□□□ -0.25
SCC4	YER147C	ANP1	P32629	500 aa		13.48	□□□□□ -0.25
SCC4	YER147C	SPL2	P38839	148 aa		13.48	□□□□□ -0.25
SCC4	YER147C	CSC1	Q06538	782 aa		13.48	□□□□□ -0.25
SCC4	YER147C	BDF2	Q07442	638 aa		13.48	□□□□□ -0.25
SCC4	YER147C	HCR1	Q05775	265 aa	Known RBP	13.48	□□□□□ -0.25
SCC4	YER147C	CDC15	P27636	974 aa		13.47	□□□□□ -0.25
SCC4	YER147C	SAC6	P32599	642 aa	Known RBP	13.47	□□□□□ -0.25
SCC4	YER147C	MAL31	P38156	614 aa		13.47	□□□□□ -0.25
SCC4	YER147C	OSW7	P43611	510 aa		13.47	□□□□□ -0.25
SCC4	YER147C	GDE1	Q02979	1223 aa		13.47	□□□□□ -0.25
SCC4	YER147C	VPS60	Q03390	229 aa		13.47	□□□□□ -0.25
SCC4	YER147C	YCG1	Q06680	1035 aa		13.47	□□□□□ -0.25
SCC4	YER147C	MCM3	P24279	971 aa	Known RBP	13.46	□□□□□ -0.25
SCC4	YER147C	PTK1	P36002	662 aa	Predicted RBP	13.46	□□□□□ -0.25
SCC4	YER147C	MYO3	P36006	1272 aa		13.46	□□□□□ -0.25
SCC4	YER147C	ADE17	P38009	592 aa	Known RBP	13.46	□□□□□ -0.25
SCC4	YER147C	RXT2	P38255	430 aa		13.46	□□□□□ -0.25
SCC4	YER147C	STR2	P47164	639 aa		13.46	□□□□□ -0.25
SCC4	YER147C	RPT4	P53549	437 aa	Known RBP	13.46	□□□□□ -0.25
SCC4	YER147C	COG4	Q06096	861 aa		13.46	□□□□□ -0.25
SCC4	YER147C	MRD1	Q06106	887 aa	Known RBP	13.46	□□□□□ -0.25
SCC4	YER147C	QCR6	P00127	147 aa		13.46	□□□□□ -0.26
SCC4	YER147C	BMH1	P29311	267 aa	Known RBP	13.46	□□□□□ -0.26
SCC4	YER147C	RTS1	P38903	757 aa		13.46	□□□□□ -0.26
SCC4	YER147C	MSH4	P40965	878 aa	Predicted RBP	13.46	□□□□□ -0.26
SCC4	YER147C	ALD2	P47771	506 aa		13.46	□□□□□ -0.26
SCC4	YER147C	GFD1	Q04839	188 aa	Known RBP	13.46	□□□□□ -0.26
SCC4	YER147C	APL4	Q12028	832 aa		13.46	□□□□□ -0.26
SCC4	YER147C	PET111	P08468	800 aa		13.45	□□□□□ -0.26
SCC4	YER147C	RPT3	P33298	428 aa	Known RBP	13.45	□□□□□ -0.26
SCC4	YER147C	IRC4	Q03036	179 aa		13.45	□□□□□ -0.26
SCC4	YER147C	NBL1	Q3E7Y6	73 aa		13.45	□□□□□ -0.26
SCC4	YER147C	FIG2	P25653	1609 aa		13.45	□□□□□ -0.26
SCC4	YER147C	PHO13	P19881	312 aa		13.44	□□□□□ -0.26
SCC4	YER147C	PCI8	P40512	444 aa		13.44	□□□□□ -0.26
SCC4	YER147C	AFT2	Q08957	416 aa		13.44	□□□□□ -0.26
SCC4	YER147C	PDC1	P06169	563 aa	Known RBP	13.44	□□□□□ -0.26
SCC4	YER147C	MAK31	P23059	88 aa		13.44	□□□□□ -0.26

Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms