RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W YHR020WP38708 688 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W UBP12P39538 1254 aa1.69□□□□□ -2.14
SPC110YDR356W CAB2P40506 365 aa1.69□□□□□ -2.14
SPC110YDR356W AIR1P40507 360 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W VTC2P43585 828 aa1.69□□□□□ -2.14
SPC110YDR356W MET12P46151 657 aa1.69□□□□□ -2.14
SPC110YDR356W TPO2P53283 614 aa1.69□□□□□ -2.14
SPC110YDR356W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SPC110YDR356W GAD1Q04792 585 aa1.69□□□□□ -2.14
SPC110YDR356W CLP1Q08685 445 aaPredicted RBP1.69□□□□□ -2.14
SPC110YDR356W PSH1Q12161 406 aa1.69□□□□□ -2.14
SPC110YDR356W GLE1Q12315 538 aa1.69□□□□□ -2.14
SPC110YDR356W NOP14Q99207 810 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W MYO4P32492 1471 aa1.69□□□□□ -2.14
SPC110YDR356W RPS3P05750 240 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W MAK16P10962 306 aaPredicted RBP1.68□□□□□ -2.14
SPC110YDR356W KAR2P16474 682 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W KRR1P25586 316 aaPredicted RBP1.68□□□□□ -2.14
SPC110YDR356W UGA3P26370 528 aa1.68□□□□□ -2.14
SPC110YDR356W NAB2P32505 525 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14 RIP-Chip
SPC110YDR356W COY1P34237 679 aa1.68□□□□□ -2.14
SPC110YDR356W MTC2P34246 357 aa1.68□□□□□ -2.14
SPC110YDR356W PSY4P38193 441 aa1.68□□□□□ -2.14
SPC110YDR356W TCD1P38756 429 aa1.68□□□□□ -2.14
SPC110YDR356W RSC30P38781 883 aa1.68□□□□□ -2.14
SPC110YDR356W SMC2P38989 1170 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W POP2P39008 433 aa1.68□□□□□ -2.14
SPC110YDR356W MXR1P40029 184 aa1.68□□□□□ -2.14
SPC110YDR356W RTT106P40161 455 aa1.68□□□□□ -2.14
SPC110YDR356W FYV8P46949 817 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W GPI8P49018 411 aa1.68□□□□□ -2.14
SPC110YDR356W DUS1P53759 423 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W YNL050CP53952 270 aa1.68□□□□□ -2.14
SPC110YDR356W PNG1Q02890 363 aa1.68□□□□□ -2.14
SPC110YDR356W RBA50Q04418 439 aa1.68□□□□□ -2.14
SPC110YDR356W RRN11Q04712 507 aa1.68□□□□□ -2.14
SPC110YDR356W YOL057WQ08225 711 aa1.68□□□□□ -2.14
SPC110YDR356W RUD3Q12234 484 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W CLN2P20438 545 aa1.68□□□□□ -2.14
SPC110YDR356W RPA135P22138 1203 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W ANP1P32629 500 aa1.68□□□□□ -2.14
SPC110YDR356W KDX1P36005 433 aa1.68□□□□□ -2.14
SPC110YDR356W TAF5P38129 798 aa1.68□□□□□ -2.14
SPC110YDR356W YAP3P38749 330 aa1.68□□□□□ -2.14
SPC110YDR356W SEC26P41810 973 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W SMC3P47037 1230 aa1.68□□□□□ -2.14
SPC110YDR356W LIA1P47120 325 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W SRB7P47822 140 aa1.68□□□□□ -2.14
SPC110YDR356W GYP7P48365 746 aa1.68□□□□□ -2.14
SPC110YDR356W ENV11P53246 860 aa1.68□□□□□ -2.14
SPC110YDR356W SND1Q04007 877 aa1.68□□□□□ -2.14
SPC110YDR356W YDL073WQ07454 984 aa1.68□□□□□ -2.14
SPC110YDR356W BMS1Q08965 1183 aaKnown RBP1.68□□□□□ -2.14
SPC110YDR356W SEC39Q12745 709 aa1.68□□□□□ -2.14
SPC110YDR356W TAF13P11747 167 aa1.67□□□□□ -2.14
SPC110YDR356W PDI1P17967 522 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W GRR1P24814 1151 aa1.67□□□□□ -2.14
SPC110YDR356W PWP2P25635 923 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W RPN2P32565 945 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W SSE1P32589 693 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W MNR2P35724 969 aa1.67□□□□□ -2.14
SPC110YDR356W ESL2P36168 1195 aa1.67□□□□□ -2.14
SPC110YDR356W OTU2P38747 307 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W MGA2P40578 1113 aa1.67□□□□□ -2.14
SPC110YDR356W DAK2P43550 591 aa1.67□□□□□ -2.14
SPC110YDR356W SAP155P43612 1002 aa1.67□□□□□ -2.14
SPC110YDR356W TAF1P46677 1066 aa1.67□□□□□ -2.14
SPC110YDR356W SCW11P53189 542 aa1.67□□□□□ -2.14
SPC110YDR356W PXR1P53335 271 aaPredicted RBP1.67□□□□□ -2.14
SPC110YDR356W NSE3Q05541 303 aa1.67□□□□□ -2.14
SPC110YDR356W GRC3Q07845 632 aa1.67□□□□□ -2.14
SPC110YDR356W HAT1Q12341 374 aa1.67□□□□□ -2.14
SPC110YDR356W GCD1P09032 578 aaPredicted RBP1.67□□□□□ -2.14
SPC110YDR356W TRX2P22803 104 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W MCM2P29469 868 aa1.67□□□□□ -2.14
SPC110YDR356W NTG1P31378 399 aa1.67□□□□□ -2.14
SPC110YDR356W DEP1P31385 405 aa1.67□□□□□ -2.14
SPC110YDR356W SSH4P32343 579 aa1.67□□□□□ -2.14
SPC110YDR356W LYP1P32487 611 aa1.67□□□□□ -2.14
SPC110YDR356W IME2P32581 645 aa1.67□□□□□ -2.14
SPC110YDR356W CPR5P35176 225 aa1.67□□□□□ -2.14
SPC110YDR356W YKL050CP35736 922 aa1.67□□□□□ -2.14
SPC110YDR356W RMA1P36001 430 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W RIM4P38741 713 aa1.67□□□□□ -2.14
SPC110YDR356W BFR1P38934 470 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14 RIP-Chip
SPC110YDR356W HAL5P38970 855 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W CST6P40535 587 aa1.67□□□□□ -2.14
SPC110YDR356W SBE2P42223 864 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W BUD27P43573 796 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
SPC110YDR356W IOC3P43596 787 aa1.67□□□□□ -2.14
SPC110YDR356W BDP1P46678 594 aa1.67□□□□□ -2.14
SPC110YDR356W YJL049WP47048 450 aa1.67□□□□□ -2.14
SPC110YDR356W YJL007CP47080 104 aa1.67□□□□□ -2.14
SPC110YDR356W NSG2P53898 299 aa1.67□□□□□ -2.14
SPC110YDR356W YNL144CP53907 740 aa1.67□□□□□ -2.14
SPC110YDR356W ATG38Q05789 226 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W RSC2Q06488 889 aa1.67□□□□□ -2.14
SPC110YDR356W VIP1Q06685 1146 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W SUB2Q07478 446 aaKnown RBP1.67□□□□□ -2.14
SPC110YDR356W LAM6Q08001 693 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms