RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAL1	YDR348C	RPL34B	P40525	121 aa	Known RBP	5.78	□□□□□ -1.48
PAL1	YDR348C	SSL2	Q00578	843 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	MRS2	Q01926	470 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	YPR204W	Q08995	1032 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	LYS2	P07702	1392 aa		5.78	□□□□□ -1.48
PAL1	YDR348C	MOD5	P07884	428 aa		5.77	□□□□□ -1.49
PAL1	YDR348C	RNR2	P09938	399 aa	Known RBP	5.77	□□□□□ -1.49
PAL1	YDR348C	MSH3	P25336	1018 aa		5.77	□□□□□ -1.49
PAL1	YDR348C	RTG2	P32608	588 aa	Known RBP	5.77	□□□□□ -1.49
PAL1	YDR348C	HYR1	P40581	163 aa	Known RBP	5.77	□□□□□ -1.49
PAL1	YDR348C	HXT17	P53631	564 aa		5.77	□□□□□ -1.49
PAL1	YDR348C	PAP2	P53632	584 aa	Known RBP	5.77	□□□□□ -1.49
PAL1	YDR348C	PRP3	Q03338	469 aa	Predicted RBP	5.77	□□□□□ -1.49
PAL1	YDR348C	YOL087C	Q99247	1116 aa		5.77	□□□□□ -1.49
PAL1	YDR348C	BCK1	Q01389	1478 aa		5.77	□□□□□ -1.49
PAL1	YDR348C	SPT5	P27692	1063 aa	Known RBP	5.76	□□□□□ -1.49
PAL1	YDR348C	RFC1	P38630	861 aa	Known RBP	5.76	□□□□□ -1.49
PAL1	YDR348C	CST6	P40535	587 aa		5.76	□□□□□ -1.49
PAL1	YDR348C	MSH4	P40965	878 aa	Predicted RBP	5.76	□□□□□ -1.49
PAL1	YDR348C	YGL140C	P53120	1219 aa		5.76	□□□□□ -1.49
PAL1	YDR348C	YMR102C	Q03177	834 aa		5.76	□□□□□ -1.49
PAL1	YDR348C	SML1	Q04964	104 aa		5.76	□□□□□ -1.49
PAL1	YDR348C	SEC7	P11075	2009 aa	Known RBP	5.75	□□□□□ -1.49
PAL1	YDR348C	ENO1	P00924	437 aa	Known RBP	5.75	□□□□□ -1.49
PAL1	YDR348C	SES1	P07284	462 aa	Known RBP	5.75	□□□□□ -1.49
PAL1	YDR348C	PAT1	P25644	796 aa	Known RBP	5.75	□□□□□ -1.49
PAL1	YDR348C	HXT10	P43581	546 aa		5.75	□□□□□ -1.49
PAL1	YDR348C	RIM21	P48565	533 aa		5.75	□□□□□ -1.49
PAL1	YDR348C	RPN7	Q06103	429 aa	Known RBP	5.75	□□□□□ -1.49
PAL1	YDR348C	ALR1	Q08269	859 aa		5.75	□□□□□ -1.49
PAL1	YDR348C	AUS1	Q08409	1394 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	ISF1	P32488	338 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	FIG4	P42837	879 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	YGL082W	P53155	381 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	NAF1	P53919	492 aa	Known RBP	5.74	□□□□□ -1.49
PAL1	YDR348C	MRX10	Q05648	414 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	HIM1	Q06674	414 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	YPR084W	Q06821	456 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	MCM16	Q12262	181 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	SPT2	P06843	333 aa	Predicted RBP	5.74	□□□□□ -1.49
PAL1	YDR348C	TRL1	P09880	827 aa	Known RBP	5.74	□□□□□ -1.49
PAL1	YDR348C	GDT1	P38301	280 aa	Predicted RBP	5.74	□□□□□ -1.49
PAL1	YDR348C	RTT107	P38850	1070 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	VPS41	P38959	992 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	MRX12	P47084	519 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	PRP31	P49704	494 aa	Predicted RBP	5.74	□□□□□ -1.49
PAL1	YDR348C	KXD1	P53158	218 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	SPO1	P53541	631 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	PEX19	Q07418	342 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	TLG2	Q08144	397 aa		5.74	□□□□□ -1.49
PAL1	YDR348C	USO1	P25386	1790 aa		5.73	□□□□□ -1.49
PAL1	YDR348C	RDS2	P19541	446 aa	Known RBP	5.73	□□□□□ -1.49
PAL1	YDR348C	MSH1	P25846	959 aa		5.73	□□□□□ -1.49
PAL1	YDR348C	TTI1	P36097	1038 aa		5.73	□□□□□ -1.49
PAL1	YDR348C	BYE1	P36106	594 aa		5.73	□□□□□ -1.49
PAL1	YDR348C	YNG2	P38806	282 aa	Known RBP	5.73	□□□□□ -1.49
PAL1	YDR348C	RRD1	P40454	393 aa	Known RBP	5.73	□□□□□ -1.49
PAL1	YDR348C	ALD4	P46367	519 aa	Known RBP	5.73	□□□□□ -1.49
PAL1	YDR348C	FRK1	Q03002	865 aa	Predicted RBP	5.73	□□□□□ -1.49
PAL1	YDR348C	TAF13	P11747	167 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	MRC1	P25588	1096 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	CPS1	P27614	576 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	NPR3	P38742	1146 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	DOS2	P54858	310 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	ITT1	Q04638	464 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	YKL068W-A	Q3E826	78 aa		5.72	□□□□□ -1.49
PAL1	YDR348C	ATE1	P16639	503 aa		5.71	□□□□□ -1.5
PAL1	YDR348C	TEC1	P18412	486 aa		5.71	□□□□□ -1.5
PAL1	YDR348C	VPS4	P52917	437 aa		5.71	□□□□□ -1.5
PAL1	YDR348C	TAP42	Q04372	366 aa		5.71	□□□□□ -1.5
PAL1	YDR348C	DUR1,2	P32528	1835 aa	Known RBP	5.71	□□□□□ -1.5
PAL1	YDR348C	SRP54	P20424	541 aa	Known RBP	5.7	□□□□□ -1.5
PAL1	YDR348C	CCT5	P40413	562 aa	Known RBP	5.7	□□□□□ -1.5
PAL1	YDR348C	EMP47	P43555	445 aa		5.7	□□□□□ -1.5
PAL1	YDR348C	BDP1	P46678	594 aa		5.7	□□□□□ -1.5
PAL1	YDR348C	CLA4	P48562	842 aa		5.7	□□□□□ -1.5
PAL1	YDR348C	YNL011C	P53980	444 aa		5.7	□□□□□ -1.5
PAL1	YDR348C	CSI1	Q04368	295 aa		5.7	□□□□□ -1.5
PAL1	YDR348C	SUB2	Q07478	446 aa	Known RBP	5.7	□□□□□ -1.5
PAL1	YDR348C	TRS33	Q99394	268 aa		5.7	□□□□□ -1.5
PAL1	YDR348C	FRS2	P15625	503 aa	Known RBP	5.69	□□□□□ -1.5
PAL1	YDR348C	VAC17	P25591	423 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	SWH1	P35845	1188 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	AIR1	P40507	360 aa	Known RBP	5.69	□□□□□ -1.5
PAL1	YDR348C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
PAL1	YDR348C	PSH1	Q12161	406 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	VAS1	P07806	1104 aa	Known RBP	5.69	□□□□□ -1.5
PAL1	YDR348C	PDI1	P17967	522 aa	Known RBP	5.69	□□□□□ -1.5
PAL1	YDR348C	MBR1	P23493	339 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	ELM1	P32801	640 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	CTH1	P47976	325 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	GYL1	Q04322	720 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	CAB1	Q04430	367 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	COG4	Q06096	861 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	SGD1	Q06132	899 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	PUS5	Q06244	254 aa		5.69	□□□□□ -1.5
PAL1	YDR348C	PET111	P08468	800 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	CDC16	P09798	840 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	SAP190	P36123	1033 aa		5.68	□□□□□ -1.5
PAL1	YDR348C	GYP7	P48365	746 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms