RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	UBX5	Q06682	500 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	APC11	Q12157	165 aa		4.79	□□□□□ -1.64
PEP7	YDR323C	TOM20	P35180	183 aa		4.78	□□□□□ -1.64
PEP7	YDR323C	YNL165W	P53891	406 aa		4.78	□□□□□ -1.64
PEP7	YDR323C	RLP24	Q07915	199 aa	Known RBP	4.78	□□□□□ -1.64
PEP7	YDR323C	Q0182	Q9ZZW1	134 aa		4.78	□□□□□ -1.64
PEP7	YDR323C	SBP1	P10080	294 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	RGP1	P16664	663 aa		4.77	□□□□□ -1.65
PEP7	YDR323C	RPB10	P22139	70 aa		4.77	□□□□□ -1.65
PEP7	YDR323C	YCK2	P23292	546 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	NMD2	P38798	1089 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	RPT2	P40327	437 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	SUT1	P53032	299 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
PEP7	YDR323C	UTP4	Q06679	776 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	YDR215C	Q12240	137 aa		4.77	□□□□□ -1.65
PEP7	YDR323C	VMA3	P25515	160 aa		4.77	□□□□□ -1.65
PEP7	YDR323C	RPS0A	P32905	252 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	MGE1	P38523	228 aa		4.77	□□□□□ -1.65
PEP7	YDR323C	MSC7	P38694	644 aa		4.77	□□□□□ -1.65
PEP7	YDR323C	MPP10	P47083	593 aa	Known RBP	4.77	□□□□□ -1.65
PEP7	YDR323C	ATE1	P16639	503 aa		4.76	□□□□□ -1.65
PEP7	YDR323C	MLF3	P32047	452 aa		4.76	□□□□□ -1.65
PEP7	YDR323C	MET4	P32389	672 aa		4.76	□□□□□ -1.65
PEP7	YDR323C	LDH1	P38139	375 aa		4.76	□□□□□ -1.65
PEP7	YDR323C	ISW1	P38144	1129 aa		4.76	□□□□□ -1.65
PEP7	YDR323C	RRP15	Q06511	250 aa	Predicted RBP	4.76	□□□□□ -1.65
PEP7	YDR323C	BRE1	Q07457	700 aa	Known RBP	4.76	□□□□□ -1.65
PEP7	YDR323C	GAL11	P19659	1081 aa		4.75	□□□□□ -1.65
PEP7	YDR323C	SMC1	P32908	1225 aa		4.74	□□□□□ -1.65
PEP7	YDR323C	DYS1	P38791	387 aa		4.74	□□□□□ -1.65
PEP7	YDR323C	HXT8	P40886	569 aa		4.74	□□□□□ -1.65
PEP7	YDR323C	SLN1	P39928	1220 aa	Predicted RBP	4.73	□□□□□ -1.65
PEP7	YDR323C	FIR1	P40020	876 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	QDR2	P40474	542 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	YNL011C	P53980	444 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	HEH2	Q03281	663 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	GPI13	Q07830	1017 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	MNL2	Q12205	849 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	NHA1	Q99271	985 aa		4.73	□□□□□ -1.65
PEP7	YDR323C	TSR4	P25040	408 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	KAP122	P32767	1081 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	SEC8	P32855	1065 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	AMN1	P38285	549 aa	Predicted RBP	4.72	□□□□□ -1.65
PEP7	YDR323C	NNF1	P47149	201 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	OYE2	Q03558	400 aa	Known RBP	4.72	□□□□□ -1.65
PEP7	YDR323C	GCD6	P32501	712 aa	Known RBP	4.72	□□□□□ -1.65
PEP7	YDR323C	KTR2	P33550	425 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	RRP14	P36080	434 aa	Known RBP	4.72	□□□□□ -1.65
PEP7	YDR323C	YBR287W	P38355	427 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	PMC1	P38929	1173 aa	Predicted RBP	4.72	□□□□□ -1.65
PEP7	YDR323C	RAD55	P38953	406 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	MTO1	P53070	669 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	CDC55	Q00362	526 aa		4.72	□□□□□ -1.65
PEP7	YDR323C	GIR2	Q03768	265 aa	Predicted RBP	4.72	□□□□□ -1.65
PEP7	YDR323C	PHO4	P07270	312 aa	Known RBP	4.71	□□□□□ -1.66
PEP7	YDR323C	RAD2	P07276	1031 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	RPA135	P22138	1203 aa	Known RBP	4.71	□□□□□ -1.66
PEP7	YDR323C	MSN1	P22148	382 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	TAT1	P38085	619 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	YJR107W	P47145	328 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	SAM37	P50110	327 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	SKP1	P52286	194 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	RNH70	P53331	553 aa		4.71	□□□□□ -1.66
PEP7	YDR323C	PPG1	P32838	368 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	RPT1	P33299	467 aa	Known RBP	4.7	□□□□□ -1.66
PEP7	YDR323C	MPE1	P35728	441 aa	Known RBP	4.7	□□□□□ -1.66
PEP7	YDR323C	ERP2	P39704	215 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	TPM2	P40414	161 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	LSB6	P42951	607 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	SVF1	Q05515	481 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	YDL121C	Q07541	149 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	MCA1	Q08601	432 aa		4.7	□□□□□ -1.66
PEP7	YDR323C	VPS35	P34110	944 aa		4.69	□□□□□ -1.66
PEP7	YDR323C	DEF1	P35732	738 aa	Known RBP	4.69	□□□□□ -1.66
PEP7	YDR323C	NCL1	P38205	684 aa	Known RBP	4.69	□□□□□ -1.66
PEP7	YDR323C	NTA1	P40354	457 aa		4.69	□□□□□ -1.66
PEP7	YDR323C	PRK1	P40494	810 aa		4.69	□□□□□ -1.66
PEP7	YDR323C	DAK2	P43550	591 aa		4.69	□□□□□ -1.66
PEP7	YDR323C	RSC4	Q02206	625 aa		4.69	□□□□□ -1.66
PEP7	YDR323C	IRS4	P36115	615 aa	Known RBP	4.68	□□□□□ -1.66
PEP7	YDR323C	GIP1	P38229	639 aa		4.68	□□□□□ -1.66
PEP7	YDR323C	CIC1	P38779	376 aa	Known RBP	4.68	□□□□□ -1.66
PEP7	YDR323C	FPR3	P38911	411 aa	Known RBP	4.68	□□□□□ -1.66
PEP7	YDR323C	NOC2	P39744	710 aa	Known RBP	4.68	□□□□□ -1.66
PEP7	YDR323C	RGD2	P43556	714 aa		4.68	□□□□□ -1.66
PEP7	YDR323C	TMA64	Q04600	565 aa	Known RBP	4.68	□□□□□ -1.66
PEP7	YDR323C	BSC2	Q05611	235 aa		4.68	□□□□□ -1.66
PEP7	YDR323C	NOC3	Q07896	663 aa	Predicted RBP	4.68	□□□□□ -1.66
PEP7	YDR323C	OXR1	Q08952	273 aa		4.68	□□□□□ -1.66
PEP7	YDR323C	RPC31	P17890	251 aa		4.67	□□□□□ -1.66
PEP7	YDR323C	PGM2	P37012	569 aa	Known RBP	4.67	□□□□□ -1.66
PEP7	YDR323C	PSY2	P40164	858 aa		4.67	□□□□□ -1.66
PEP7	YDR323C	PRY1	P47032	299 aa		4.67	□□□□□ -1.66
PEP7	YDR323C	CUS1	Q02554	436 aa	Predicted RBP	4.67	□□□□□ -1.66
PEP7	YDR323C	YOR296W	Q08748	1289 aa		4.67	□□□□□ -1.66
PEP7	YDR323C	SSB1	P11484	613 aa	Known RBP	4.67	□□□□□ -1.66
PEP7	YDR323C	MFT1	P33441	392 aa	Known RBP	4.67	□□□□□ -1.66
PEP7	YDR323C	ALG14	P38242	237 aa		4.67	□□□□□ -1.66
PEP7	YDR323C	SSB2	P40150	613 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms