RNA–Protein interactions for RNA: YDL168W

SFA1, Transcript of Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase, yeast

Gene SFA1, Length 1,161 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFA1	YDL168W	PGA3	Q12746	312 aa	Known RBP	11.79	□□□□□ -0.52
SFA1	YDL168W	MET1	P36150	593 aa		11.78	□□□□□ -0.52
SFA1	YDL168W	YHL050C	P38721	697 aa		11.78	□□□□□ -0.52
SFA1	YDL168W	KEL1	P38853	1164 aa	Known RBP	11.77	□□□□□ -0.53
SFA1	YDL168W	PEA2	P40091	420 aa		11.77	□□□□□ -0.53
SFA1	YDL168W	KEL3	Q08979	651 aa	Predicted RBP	11.77	□□□□□ -0.53
SFA1	YDL168W	ADP1	P25371	1049 aa		11.76	□□□□□ -0.53
SFA1	YDL168W	CIC1	P38779	376 aa	Known RBP	11.76	□□□□□ -0.53
SFA1	YDL168W	SLN1	P39928	1220 aa	Predicted RBP	11.76	□□□□□ -0.53
SFA1	YDL168W	YPL260W	Q08977	551 aa		11.76	□□□□□ -0.53
SFA1	YDL168W	RRP8	P38961	392 aa	Known RBP	11.75	□□□□□ -0.53
SFA1	YDL168W	PNT1	P38969	423 aa		11.75	□□□□□ -0.53
SFA1	YDL168W	NIT1	P40447	199 aa		11.75	□□□□□ -0.53
SFA1	YDL168W	PCL8	Q08966	492 aa		11.75	□□□□□ -0.53
SFA1	YDL168W	PMA1	P05030	918 aa	Known RBP	11.74	□□□□□ -0.53
SFA1	YDL168W	RAD53	P22216	821 aa		11.74	□□□□□ -0.53
SFA1	YDL168W	YBL028C	P38202	106 aa		11.74	□□□□□ -0.53
SFA1	YDL168W	RTS1	P38903	757 aa		11.74	□□□□□ -0.53
SFA1	YDL168W	CWC15	Q03772	175 aa	Known RBP	11.74	□□□□□ -0.53
SFA1	YDL168W	TRL1	P09880	827 aa	Known RBP	11.73	□□□□□ -0.53
SFA1	YDL168W	YIL089W	P40500	205 aa		11.73	□□□□□ -0.53
SFA1	YDL168W	UFD2	P54860	961 aa		11.73	□□□□□ -0.53
SFA1	YDL168W	RPS15	Q01855	142 aa	Known RBP	11.73	□□□□□ -0.53
SFA1	YDL168W	MRD1	Q06106	887 aa	Known RBP	11.73	□□□□□ -0.53
SFA1	YDL168W	CSR2	Q12734	1121 aa		11.73	□□□□□ -0.53
SFA1	YDL168W	TOM1	Q03280	3268 aa		11.72	□□□□□ -0.53
SFA1	YDL168W	IMP2'	P32351	346 aa		11.72	□□□□□ -0.53
SFA1	YDL168W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.72	□□□□□ -0.53	not detected
SFA1	YDL168W	VID27	P40157	782 aa		11.72	□□□□□ -0.53
SFA1	YDL168W	HDA1	P53973	706 aa		11.72	□□□□□ -0.53
SFA1	YDL168W	YDL124W	Q07551	312 aa	Known RBP	11.72	□□□□□ -0.53
SFA1	YDL168W	SSF2	Q12153	453 aa	Predicted RBP	11.72	□□□□□ -0.53
SFA1	YDL168W	AIM9	P40053	627 aa	Known RBP	11.71	□□□□□ -0.53
SFA1	YDL168W	RAD61	Q99359	647 aa		11.71	□□□□□ -0.53
SFA1	YDL168W	TUB2	P02557	457 aa	Known RBP	11.7	□□□□□ -0.54
SFA1	YDL168W	KIN1	P13185	1064 aa		11.7	□□□□□ -0.54
SFA1	YDL168W	PRO3	P32263	286 aa	Known RBP	11.7	□□□□□ -0.54
SFA1	YDL168W	SPT21	P35209	758 aa		11.7	□□□□□ -0.54
SFA1	YDL168W	KRI1	P42846	591 aa	Known RBP	11.7	□□□□□ -0.54
SFA1	YDL168W	PTK2	P47116	818 aa	Known RBP	11.7	□□□□□ -0.54
SFA1	YDL168W	SPN1	Q06505	410 aa	Predicted RBP	11.7	□□□□□ -0.54
SFA1	YDL168W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
SFA1	YDL168W	PRE8	P23639	250 aa		11.69	□□□□□ -0.54
SFA1	YDL168W	RER2	P35196	286 aa		11.69	□□□□□ -0.54
SFA1	YDL168W	CRG1	P38892	291 aa	RIP-Chip data	11.69	□□□□□ -0.54	not detected
SFA1	YDL168W	MSH4	P40965	878 aa	Predicted RBP	11.69	□□□□□ -0.54
SFA1	YDL168W	PEP3	P27801	918 aa		11.68	□□□□□ -0.54
SFA1	YDL168W	ANP1	P32629	500 aa		11.68	□□□□□ -0.54
SFA1	YDL168W	MYO3	P36006	1272 aa		11.68	□□□□□ -0.54
SFA1	YDL168W	GAL2	P13181	574 aa		11.67	□□□□□ -0.54
SFA1	YDL168W	TPM1	P17536	199 aa	Known RBP	11.67	□□□□□ -0.54
SFA1	YDL168W	TPS3	P38426	1054 aa	Known RBP	11.67	□□□□□ -0.54
SFA1	YDL168W	VID28	P40547	921 aa		11.67	□□□□□ -0.54
SFA1	YDL168W	ESF1	Q06344	628 aa	Known RBP	11.67	□□□□□ -0.54
SFA1	YDL168W	RLF2	Q12495	606 aa		11.67	□□□□□ -0.54
SFA1	YDL168W	ACE2	P21192	770 aa		11.66	□□□□□ -0.54
SFA1	YDL168W	SRM1	P21827	482 aa		11.66	□□□□□ -0.54
SFA1	YDL168W	RIT1	P23796	513 aa		11.66	□□□□□ -0.54
SFA1	YDL168W	CHS3	P29465	1165 aa		11.66	□□□□□ -0.54
SFA1	YDL168W	PEX29	Q03370	554 aa		11.66	□□□□□ -0.54
SFA1	YDL168W	MPH3	P0CE00	602 aa		11.65	□□□□□ -0.54
SFA1	YDL168W	CST26	P38226	397 aa		11.65	□□□□□ -0.54
SFA1	YDL168W	ACA1	P39970	489 aa		11.65	□□□□□ -0.54
SFA1	YDL168W	LAP2	Q10740	671 aa		11.65	□□□□□ -0.54
SFA1	YDL168W	KRS1	P15180	591 aa	Known RBP	11.64	□□□□□ -0.55
SFA1	YDL168W	VPS8	P39702	1274 aa		11.64	□□□□□ -0.55
SFA1	YDL168W	YIR014W	P40570	242 aa		11.64	□□□□□ -0.55
SFA1	YDL168W	ECM23	Q02710	187 aa		11.64	□□□□□ -0.55
SFA1	YDL168W	SKG3	Q06315	1026 aa		11.64	□□□□□ -0.55
SFA1	YDL168W	CSM2	P40465	213 aa		11.63	□□□□□ -0.55
SFA1	YDL168W	SPO22	P40511	975 aa		11.63	□□□□□ -0.55
SFA1	YDL168W	EST2	Q06163	884 aa		11.63	□□□□□ -0.55
SFA1	YDL168W	TFC6	Q06339	672 aa		11.63	□□□□□ -0.55
SFA1	YDL168W	TYW1	Q08960	810 aa	Known RBP	11.63	□□□□□ -0.55
SFA1	YDL168W	TSR3	Q12094	313 aa	Known RBP	11.63	□□□□□ -0.55
SFA1	YDL168W	RNR2	P09938	399 aa	Known RBP	11.62	□□□□□ -0.55
SFA1	YDL168W	SNU71	P53207	620 aa	Known RBP	11.62	□□□□□ -0.55
SFA1	YDL168W	GIN4	Q12263	1142 aa		11.62	□□□□□ -0.55
SFA1	YDL168W	SAM2	P19358	384 aa	Known RBP	11.61	□□□□□ -0.55
SFA1	YDL168W	TIF4631	P39935	952 aa	Known RBP	11.61	□□□□□ -0.55
SFA1	YDL168W	RRT6	P53117	311 aa	Predicted RBP	11.61	□□□□□ -0.55
SFA1	YDL168W	MAK31	P23059	88 aa		11.6	□□□□□ -0.55
SFA1	YDL168W	FBP26	P32604	452 aa		11.6	□□□□□ -0.55
SFA1	YDL168W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	not detected
SFA1	YDL168W	MYO5	Q04439	1219 aa	Known RBP	11.6	□□□□□ -0.55
SFA1	YDL168W	EPL1	P43572	832 aa		11.59	□□□□□ -0.55
SFA1	YDL168W	ARP5	P53946	755 aa		11.59	□□□□□ -0.55
SFA1	YDL168W	RPT6	Q01939	405 aa	Known RBP	11.59	□□□□□ -0.55
SFA1	YDL168W	FBP1	P09201	348 aa		11.58	□□□□□ -0.56
SFA1	YDL168W	HVG1	P0CE11	249 aa		11.58	□□□□□ -0.56
SFA1	YDL168W	SPB4	P25808	606 aa	Predicted RBP	11.58	□□□□□ -0.56
SFA1	YDL168W	AKR1	P39010	764 aa		11.58	□□□□□ -0.56
SFA1	YDL168W	FOL1	P53848	824 aa		11.58	□□□□□ -0.56
SFA1	YDL168W	TUS1	Q06412	1307 aa		11.58	□□□□□ -0.56
SFA1	YDL168W	YDJ1	P25491	409 aa	Known RBP	11.57	□□□□□ -0.56
SFA1	YDL168W	ETP1	P38748	585 aa	Known RBP	11.57	□□□□□ -0.56
SFA1	YDL168W	VPS30	Q02948	557 aa		11.57	□□□□□ -0.56
SFA1	YDL168W	YOR111W	Q99210	232 aa		11.57	□□□□□ -0.56
SFA1	YDL168W	SRS2	P12954	1174 aa		11.56	□□□□□ -0.56
SFA1	YDL168W	SRP54	P20424	541 aa	Known RBP	11.56	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms