RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C AIM9P40053 627 aaKnown RBP5.5□□□□□ -1.53
CDC48YDL126C TRS120Q04183 1289 aa5.5□□□□□ -1.53
CDC48YDL126C SPR28Q04921 423 aa5.5□□□□□ -1.53
CDC48YDL126C RTG1P32607 177 aa5.49□□□□□ -1.53
CDC48YDL126C BUD6P41697 788 aa5.49□□□□□ -1.53
CDC48YDL126C ISR1Q06098 443 aaKnown RBP5.49□□□□□ -1.53
CDC48YDL126C FUR4P05316 633 aaKnown RBP5.48□□□□□ -1.53
CDC48YDL126C SPE2P21182 396 aa5.48□□□□□ -1.53
CDC48YDL126C HXT5P38695 592 aa5.48□□□□□ -1.53
CDC48YDL126C BNI4P53858 892 aa5.48□□□□□ -1.53
CDC48YDL126C VPS16Q03308 798 aa5.48□□□□□ -1.53
CDC48YDL126C LDB19Q12502 818 aa5.48□□□□□ -1.53
CDC48YDL126C HSP82P02829 709 aaKnown RBP5.48□□□□□ -1.53
CDC48YDL126C NFU1P32860 256 aa5.48□□□□□ -1.53
CDC48YDL126C RPB10P22139 70 aa5.47□□□□□ -1.53
CDC48YDL126C TPM2P40414 161 aa5.47□□□□□ -1.53
CDC48YDL126C YOL057WQ08225 711 aa5.47□□□□□ -1.53
CDC48YDL126C PIN2Q12057 282 aa5.47□□□□□ -1.53
CDC48YDL126C MIP1P15801 1254 aa5.47□□□□□ -1.53
CDC48YDL126C GCD11P32481 527 aaKnown RBP5.47□□□□□ -1.53
CDC48YDL126C ATG3P40344 310 aa5.47□□□□□ -1.53
CDC48YDL126C TAF8Q03750 510 aa5.47□□□□□ -1.53
CDC48YDL126C YDL129WQ07555 291 aa5.47□□□□□ -1.53
CDC48YDL126C TY1B-NL2Q99337 1749 aaKnown RBP5.47□□□□□ -1.53
CDC48YDL126C RAD2P07276 1031 aa5.46□□□□□ -1.53
CDC48YDL126C MCM2P29469 868 aa5.46□□□□□ -1.53
CDC48YDL126C FPR3P38911 411 aaKnown RBP5.46□□□□□ -1.53
CDC48YDL126C NNF1P47149 201 aa5.46□□□□□ -1.53
CDC48YDL126C ELP4Q02884 456 aaKnown RBP5.46□□□□□ -1.53
CDC48YDL126C PDS5Q04264 1277 aa5.46□□□□□ -1.53
CDC48YDL126C YPQ2Q06328 317 aa5.46□□□□□ -1.53
CDC48YDL126C SSF2Q12153 453 aaPredicted RBP5.46□□□□□ -1.53
CDC48YDL126C YOL098CQ12496 1037 aa5.46□□□□□ -1.53
CDC48YDL126C MLP1Q02455 1875 aaKnown RBP5.46□□□□□ -1.54
CDC48YDL126C NTH2P35172 780 aa5.46□□□□□ -1.54
CDC48YDL126C MPE1P35728 441 aaKnown RBP5.46□□□□□ -1.54
CDC48YDL126C AIM21P40563 679 aa5.46□□□□□ -1.54
CDC48YDL126C ALG12P53730 551 aa5.46□□□□□ -1.54
CDC48YDL126C HIF1Q12373 385 aa5.46□□□□□ -1.54
CDC48YDL126C KRE5P22023 1365 aa5.45□□□□□ -1.54
CDC48YDL126C SWI5P08153 709 aa5.45□□□□□ -1.54
CDC48YDL126C VAN1P23642 535 aa5.45□□□□□ -1.54
CDC48YDL126C MAK10Q02197 733 aa5.45□□□□□ -1.54
CDC48YDL126C CFT1Q06632 1357 aaKnown RBP5.45□□□□□ -1.54
CDC48YDL126C SPT2P06843 333 aaPredicted RBP5.45□□□□□ -1.54
CDC48YDL126C SDH2P21801 266 aa5.45□□□□□ -1.54
CDC48YDL126C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
CDC48YDL126C TSR4P25040 408 aa5.45□□□□□ -1.54
CDC48YDL126C YDL121CQ07541 149 aa5.45□□□□□ -1.54
CDC48YDL126C USO1P25386 1790 aa5.45□□□□□ -1.54
CDC48YDL126C VMA4P22203 233 aaKnown RBP5.44□□□□□ -1.54
CDC48YDL126C BOI2P39969 1040 aa5.44□□□□□ -1.54
CDC48YDL126C RRN7P40992 514 aa5.44□□□□□ -1.54
CDC48YDL126C EMW1P42842 904 aaKnown RBP5.44□□□□□ -1.54
CDC48YDL126C SPP1Q03012 353 aa5.44□□□□□ -1.54
CDC48YDL126C PRT1P06103 763 aaKnown RBP5.44□□□□□ -1.54
CDC48YDL126C NPL4P33755 580 aa5.44□□□□□ -1.54
CDC48YDL126C MTO1P53070 669 aa5.44□□□□□ -1.54
CDC48YDL126C DNM1P54861 757 aa5.44□□□□□ -1.54
CDC48YDL126C RPS6AP0CX37 236 aaKnown RBP5.43□□□□□ -1.54
CDC48YDL126C RPS6BP0CX38 236 aaPredicted RBP5.43□□□□□ -1.54
CDC48YDL126C ENV11P53246 860 aa5.43□□□□□ -1.54
CDC48YDL126C TRS33Q99394 268 aa5.43□□□□□ -1.54
CDC48YDL126C RIA1P53893 1110 aa5.43□□□□□ -1.54
CDC48YDL126C GIR2Q03768 265 aaPredicted RBP5.43□□□□□ -1.54
CDC48YDL126C YML082WQ04533 649 aaKnown RBP5.43□□□□□ -1.54
CDC48YDL126C JIP5Q06214 492 aaPredicted RBP5.43□□□□□ -1.54
CDC48YDL126C ATG20Q07528 640 aa5.43□□□□□ -1.54
CDC48YDL126C RPT1P33299 467 aaKnown RBP5.42□□□□□ -1.54
CDC48YDL126C VAC8P39968 578 aa5.42□□□□□ -1.54
CDC48YDL126C THI12P42883 340 aa5.42□□□□□ -1.54
CDC48YDL126C THI5P43534 340 aa5.42□□□□□ -1.54
CDC48YDL126C THI11P47183 340 aa5.42□□□□□ -1.54
CDC48YDL126C THI13Q07748 340 aa5.42□□□□□ -1.54
CDC48YDL126C CYC8P14922 966 aa5.42□□□□□ -1.54
CDC48YDL126C DEF1P35732 738 aaKnown RBP5.42□□□□□ -1.54
CDC48YDL126C NAB3P38996 802 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
CDC48YDL126C TY4A-JP47023 414 aa5.42□□□□□ -1.54
CDC48YDL126C ALD6P54115 500 aaKnown RBP5.42□□□□□ -1.54
CDC48YDL126C RPN4Q03465 531 aa5.42□□□□□ -1.54
CDC48YDL126C HXK1P04806 485 aaKnown RBP5.41□□□□□ -1.54
CDC48YDL126C CYT1P07143 309 aa5.41□□□□□ -1.54
CDC48YDL126C ISC10P32645 267 aa5.41□□□□□ -1.54
CDC48YDL126C MGE1P38523 228 aa5.41□□□□□ -1.54
CDC48YDL126C RSC4Q02206 625 aa5.41□□□□□ -1.54
CDC48YDL126C PPM2Q08282 695 aa5.41□□□□□ -1.54
CDC48YDL126C TAF13P11747 167 aa5.41□□□□□ -1.54
CDC48YDL126C DUT1P33317 147 aa5.41□□□□□ -1.54
CDC48YDL126C PSK1P31374 1356 aa5.4□□□□□ -1.54
CDC48YDL126C SSB1P11484 613 aaKnown RBP5.4□□□□□ -1.54
CDC48YDL126C SSB2P40150 613 aaKnown RBP5.4□□□□□ -1.54
CDC48YDL126C SPR3P41901 512 aa5.4□□□□□ -1.54
CDC48YDL126C ISU1Q03020 165 aa5.4□□□□□ -1.54
CDC48YDL126C GRX3Q03835 250 aa5.4□□□□□ -1.54
CDC48YDL126C NCR1Q12200 1170 aa5.4□□□□□ -1.54
CDC48YDL126C CHZ1P40019 153 aaPredicted RBP5.4□□□□□ -1.55
CDC48YDL126C KXD1P53158 218 aa5.4□□□□□ -1.55
CDC48YDL126C CDC55Q00362 526 aa5.4□□□□□ -1.55
CDC48YDL126C FKH1P40466 484 aa5.39□□□□□ -1.55
CDC48YDL126C YGR122WP53272 402 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms