RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	MDJ2	P42834	146 aa		4.69	□□□□□ -1.66
TRX3	YCR083W	BDS1	Q08347	646 aa		4.69	□□□□□ -1.66
TRX3	YCR083W	MSC6	Q08818	692 aa	Known RBP	4.69	□□□□□ -1.66
TRX3	YCR083W	WTM2	Q12206	467 aa		4.69	□□□□□ -1.66
TRX3	YCR083W	KRE5	P22023	1365 aa		4.68	□□□□□ -1.66
TRX3	YCR083W	RPP2B	P02400	110 aa	Known RBP	4.68	□□□□□ -1.66
TRX3	YCR083W	NAP1	P25293	417 aa	Known RBP	4.68	□□□□□ -1.66
TRX3	YCR083W	YBL086C	P38177	466 aa		4.68	□□□□□ -1.66
TRX3	YCR083W	UTP7	P40055	554 aa	Known RBP	4.68	□□□□□ -1.66
TRX3	YCR083W	CLA4	P48562	842 aa		4.68	□□□□□ -1.66
TRX3	YCR083W	SNU71	P53207	620 aa	Known RBP	4.68	□□□□□ -1.66
TRX3	YCR083W	CAB1	Q04430	367 aa		4.68	□□□□□ -1.66
TRX3	YCR083W	PSK1	P31374	1356 aa		4.67	□□□□□ -1.66
TRX3	YCR083W	RPP0	P05317	312 aa	Known RBP	4.67	□□□□□ -1.66
TRX3	YCR083W	STE6	P12866	1290 aa		4.67	□□□□□ -1.66
TRX3	YCR083W	ISC10	P32645	267 aa		4.67	□□□□□ -1.66
TRX3	YCR083W	NGR1	P32831	672 aa	Known RBP	4.67	□□□□□ -1.66
TRX3	YCR083W	DLD3	P39976	496 aa	Known RBP	4.67	□□□□□ -1.66
TRX3	YCR083W	HED1	Q03937	162 aa		4.67	□□□□□ -1.66
TRX3	YCR083W	YEF3	P16521	1044 aa	Known RBP	4.66	□□□□□ -1.66
TRX3	YCR083W	IOC4	Q04213	475 aa		4.66	□□□□□ -1.66
TRX3	YCR083W	NUT2	Q06213	157 aa		4.66	□□□□□ -1.66
TRX3	YCR083W	ASF1	P32447	279 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	BOI1	P38041	980 aa	Known RBP	4.65	□□□□□ -1.67
TRX3	YCR083W	YBR197C	P38306	217 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	PPX1	P38698	397 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	CHZ1	P40019	153 aa	Predicted RBP	4.65	□□□□□ -1.67
TRX3	YCR083W	CDC45	Q08032	650 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	MET32	Q12041	191 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	WHI5	Q12416	295 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	FRT1	Q99332	602 aa		4.65	□□□□□ -1.67
TRX3	YCR083W	RPB10	P22139	70 aa		4.64	□□□□□ -1.67
TRX3	YCR083W	VPS27	P40343	622 aa	Known RBP	4.64	□□□□□ -1.67
TRX3	YCR083W	POL32	P47110	350 aa		4.64	□□□□□ -1.67
TRX3	YCR083W	ACF4	P47129	309 aa		4.64	□□□□□ -1.67
TRX3	YCR083W	LSO1	Q3E827	93 aa		4.64	□□□□□ -1.67
TRX3	YCR083W	TY4B-H	P0C2J7	1802 aa		4.64	□□□□□ -1.67
TRX3	YCR083W	TY4B-J	P47024	1803 aa		4.64	□□□□□ -1.67
TRX3	YCR083W	UGA3	P26370	528 aa		4.63	□□□□□ -1.67
TRX3	YCR083W	AIR1	P40507	360 aa	Known RBP	4.63	□□□□□ -1.67
TRX3	YCR083W	BRE2	P43132	505 aa		4.63	□□□□□ -1.67
TRX3	YCR083W	SUM1	P46676	1062 aa		4.63	□□□□□ -1.67
TRX3	YCR083W	YDL144C	Q07589	356 aa		4.63	□□□□□ -1.67
TRX3	YCR083W	ALA1	P40825	983 aa	Known RBP	4.62	□□□□□ -1.67
TRX3	YCR083W	SPR3	P41901	512 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	ALD2	P47771	506 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	SUT1	P53032	299 aa	Known RBP	4.62	□□□□□ -1.67
TRX3	YCR083W	RIA1	P53893	1110 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	APC1	P53886	1748 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	YIL177C	P40434	1758 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	YJL225C	P40889	1758 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	AUS1	Q08409	1394 aa		4.62	□□□□□ -1.67
TRX3	YCR083W	YRF1-2	P40105	1681 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	MCM1	P11746	286 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	ATE1	P16639	503 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	GAR1	P28007	205 aa	Known RBP	4.61	□□□□□ -1.67
TRX3	YCR083W	PPH3	P32345	308 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	HXT5	P38695	592 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	YRB30	P53107	440 aa	Predicted RBP	4.61	□□□□□ -1.67
TRX3	YCR083W	HST3	P53687	447 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	RCM1	P53972	490 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	YPQ2	Q06328	317 aa		4.61	□□□□□ -1.67
TRX3	YCR083W	RVB2	Q12464	471 aa	Known RBP	4.61	□□□□□ -1.67
TRX3	YCR083W	RRP5	Q05022	1729 aa	Known RBP	4.6	□□□□□ -1.67
TRX3	YCR083W	KAR2	P16474	682 aa	Known RBP	4.6	□□□□□ -1.67
TRX3	YCR083W	SUI2	P20459	304 aa	Known RBP	4.6	□□□□□ -1.67
TRX3	YCR083W	SCD5	P34758	872 aa		4.6	□□□□□ -1.67
TRX3	YCR083W	PAM1	P37304	830 aa	Known RBP	4.6	□□□□□ -1.67
TRX3	YCR083W	FUN12	P39730	1002 aa	Known RBP	4.6	□□□□□ -1.67
TRX3	YCR083W	MPP10	P47083	593 aa	Known RBP	4.6	□□□□□ -1.67
TRX3	YCR083W	TRS120	Q04183	1289 aa		4.6	□□□□□ -1.67
TRX3	YCR083W	TAP42	Q04372	366 aa		4.6	□□□□□ -1.67
TRX3	YCR083W	CDC4	P07834	779 aa		4.59	□□□□□ -1.67
TRX3	YCR083W	SIR4	P11978	1358 aa		4.59	□□□□□ -1.67
TRX3	YCR083W	MRPL33	P20084	86 aa		4.59	□□□□□ -1.67
TRX3	YCR083W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TRX3	YCR083W	MET4	P32389	672 aa		4.59	□□□□□ -1.67
TRX3	YCR083W	ASH1	P34233	588 aa		4.59	□□□□□ -1.67
TRX3	YCR083W	ADE6	P38972	1358 aa	Known RBP	4.59	□□□□□ -1.67
TRX3	YCR083W	RRP46	P53256	223 aa	Predicted RBP	4.59	□□□□□ -1.67
TRX3	YCR083W	RRP15	Q06511	250 aa	Predicted RBP	4.59	□□□□□ -1.67
TRX3	YCR083W	Q0182	Q9ZZW1	134 aa		4.59	□□□□□ -1.67
TRX3	YCR083W	FKS3	Q04952	1785 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	ARG82	P07250	355 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	AFT1	P22149	690 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	MLF3	P32047	452 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	MGE1	P38523	228 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	AAD14	P42884	376 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	MSB3	P48566	633 aa	Predicted RBP	4.58	□□□□□ -1.68
TRX3	YCR083W	YNR029C	P53729	429 aa	Known RBP	4.58	□□□□□ -1.68
TRX3	YCR083W	UFD2	P54860	961 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	MAK10	Q02197	733 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	APC11	Q12157	165 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	SRF1	Q12516	437 aa		4.58	□□□□□ -1.68
TRX3	YCR083W	YRF1-4	O13559	1382 aa		4.57	□□□□□ -1.68
TRX3	YCR083W	RPO41	P13433	1351 aa	Known RBP	4.57	□□□□□ -1.68
TRX3	YCR083W	VMA3	P25515	160 aa		4.57	□□□□□ -1.68
TRX3	YCR083W	RTR1	P40084	226 aa	Predicted RBP	4.57	□□□□□ -1.68
TRX3	YCR083W	MTR4	P47047	1073 aa	Known RBP	4.57	□□□□□ -1.68
TRX3	YCR083W	YNL165W	P53891	406 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms