RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W PBY1P38254 753 aa1.84□□□□□ -2.11
VPS15YBR097W BRL1P38770 471 aa1.84□□□□□ -2.11
VPS15YBR097W LEM3P42838 414 aa1.84□□□□□ -2.11
VPS15YBR097W DAS1P47005 663 aa1.84□□□□□ -2.11
VPS15YBR097W TY4A-JP47023 414 aa1.84□□□□□ -2.11
VPS15YBR097W MDM1Q01846 1127 aa1.84□□□□□ -2.11
VPS15YBR097W RPL6AQ02326 176 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W LCD1Q04377 747 aa1.84□□□□□ -2.11
VPS15YBR097W MRD1Q06106 887 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W MLH2Q07980 695 aa1.84□□□□□ -2.11
VPS15YBR097W ICL2Q12031 575 aa1.84□□□□□ -2.11
VPS15YBR097W SCC2Q04002 1493 aa1.84□□□□□ -2.11
VPS15YBR097W SPP41P38904 1435 aa1.84□□□□□ -2.11
VPS15YBR097W ADE2P21264 571 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W HSP104P31539 908 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W EFT1P32324 842 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W NIP1P32497 812 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W KAP123P40069 1113 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W IOC3P43596 787 aa1.84□□□□□ -2.11
VPS15YBR097W RPA34P47006 233 aaPredicted RBP1.84□□□□□ -2.11
VPS15YBR097W RAT1Q02792 1006 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W RPN4Q03465 531 aa1.84□□□□□ -2.11
VPS15YBR097W GIR2Q03768 265 aaPredicted RBP1.84□□□□□ -2.11
VPS15YBR097W SOV1Q04748 898 aa1.84□□□□□ -2.11
VPS15YBR097W VTA1Q06263 330 aa1.84□□□□□ -2.11
VPS15YBR097W MAG2Q06436 670 aaKnown RBP1.84□□□□□ -2.11
VPS15YBR097W BRR1Q99177 341 aaPredicted RBP1.84□□□□□ -2.11
VPS15YBR097W CDC31P06704 161 aaKnown RBP1.84□□□□□ -2.12
VPS15YBR097W SSA4P22202 642 aaKnown RBP1.84□□□□□ -2.12
VPS15YBR097W UBP15P50101 1230 aa1.84□□□□□ -2.12
VPS15YBR097W CGR1P53188 120 aa1.84□□□□□ -2.12
VPS15YBR097W YNL247WP53852 767 aaKnown RBP1.84□□□□□ -2.12
VPS15YBR097W INA17Q02888 182 aa1.84□□□□□ -2.12
VPS15YBR097W RAD1P06777 1100 aa1.84□□□□□ -2.12
VPS15YBR097W KSS1P14681 368 aa1.84□□□□□ -2.12
VPS15YBR097W SRB4P32569 687 aa1.84□□□□□ -2.12
VPS15YBR097W HSP78P33416 811 aa1.84□□□□□ -2.12
VPS15YBR097W VPS35P34110 944 aa1.84□□□□□ -2.12
VPS15YBR097W RRP1P35178 278 aaPredicted RBP1.84□□□□□ -2.12
VPS15YBR097W MRPL40P36534 297 aa1.84□□□□□ -2.12
VPS15YBR097W RRP8P38961 392 aaKnown RBP1.84□□□□□ -2.12
VPS15YBR097W YJR107WP47145 328 aa1.84□□□□□ -2.12
VPS15YBR097W TUB4P53378 473 aa1.84□□□□□ -2.12
VPS15YBR097W UBP10P53874 792 aaPredicted RBP1.84□□□□□ -2.12
VPS15YBR097W SXM1Q04175 944 aaKnown RBP1.84□□□□□ -2.12
VPS15YBR097W RTT103Q05543 409 aa1.84□□□□□ -2.12
VPS15YBR097W YRM1Q12340 786 aa1.84□□□□□ -2.12
VPS15YBR097W PRP5P21372 849 aaPredicted RBP1.83□□□□□ -2.12
VPS15YBR097W SMY1P32364 656 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W SAC6P32599 642 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W OLA1P38219 394 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W MUM2P38236 366 aa1.83□□□□□ -2.12
VPS15YBR097W VMR1P38735 1592 aa1.83□□□□□ -2.12
VPS15YBR097W EGD2P38879 174 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W YRB1P41920 201 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W DUG1P43616 481 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W RBA50Q04418 439 aa1.83□□□□□ -2.12
VPS15YBR097W HLR1Q04429 423 aa1.83□□□□□ -2.12
VPS15YBR097W OSW2Q12202 724 aa1.83□□□□□ -2.12
VPS15YBR097W SEM1O94742 89 aa1.83□□□□□ -2.12
VPS15YBR097W SPS1P08458 490 aa1.83□□□□□ -2.12
VPS15YBR097W KCC4P25389 1037 aa1.83□□□□□ -2.12
VPS15YBR097W SPT16P32558 1035 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W MCD4P36051 919 aa1.83□□□□□ -2.12
VPS15YBR097W SEC31P38968 1273 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W ECM1P39715 212 aa1.83□□□□□ -2.12
VPS15YBR097W TOM22P49334 152 aa1.83□□□□□ -2.12
VPS15YBR097W SRC1Q03707 834 aa1.83□□□□□ -2.12
VPS15YBR097W SGD1Q06132 899 aa1.83□□□□□ -2.12
VPS15YBR097W SNT2P53127 1403 aa1.83□□□□□ -2.12
VPS15YBR097W STI1P15705 589 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
VPS15YBR097W RPC31P17890 251 aa1.83□□□□□ -2.12
VPS15YBR097W APN1P22936 367 aa1.83□□□□□ -2.12
VPS15YBR097W MSH1P25846 959 aa1.83□□□□□ -2.12
VPS15YBR097W MSH2P25847 964 aa1.83□□□□□ -2.12
VPS15YBR097W TTI1P36097 1038 aa1.83□□□□□ -2.12
VPS15YBR097W GRS1P38088 690 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W VPS45P38932 577 aa1.83□□□□□ -2.12
VPS15YBR097W YAR028WP39548 234 aa1.83□□□□□ -2.12
VPS15YBR097W MET10P39692 1035 aa1.83□□□□□ -2.12
VPS15YBR097W SPO74P45819 413 aa1.83□□□□□ -2.12
VPS15YBR097W GLG2P47011 380 aa1.83□□□□□ -2.12
VPS15YBR097W NOP9P47077 666 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W GNP1P48813 663 aa1.83□□□□□ -2.12
VPS15YBR097W ATG1P53104 897 aa1.83□□□□□ -2.12
VPS15YBR097W COP1P53622 1201 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W YNR061CP53747 219 aa1.83□□□□□ -2.12
VPS15YBR097W MDG1P53885 366 aa1.83□□□□□ -2.12
VPS15YBR097W YNL050CP53952 270 aa1.83□□□□□ -2.12
VPS15YBR097W UGO1Q03327 502 aa1.83□□□□□ -2.12
VPS15YBR097W SHE9Q04172 456 aa1.83□□□□□ -2.12
VPS15YBR097W YLR283WQ05867 314 aa1.83□□□□□ -2.12
VPS15YBR097W BUD21Q08492 214 aaPredicted RBP1.83□□□□□ -2.12
VPS15YBR097W TMA46Q12000 345 aaKnown RBP1.83□□□□□ -2.12
VPS15YBR097W BUG1Q12191 341 aa1.83□□□□□ -2.12
VPS15YBR097W COX6P00427 148 aa1.82□□□□□ -2.12
VPS15YBR097W PRI1P10363 409 aa1.82□□□□□ -2.12
VPS15YBR097W DBP3P20447 523 aaKnown RBP1.82□□□□□ -2.12
VPS15YBR097W MSH3P25336 1018 aa1.82□□□□□ -2.12
VPS15YBR097W SWE1P32944 819 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms