RNA–Protein interactions for RNA: YBR009C

HHF1, Transcript of Histone H4, yeast

Gene HHF1, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHF1	YBR009C	FAA3	P39002	694 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	SAM37	P50110	327 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	FOL1	P53848	824 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	YNL011C	P53980	444 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	CDC55	Q00362	526 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	CAB1	Q04430	367 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	SRF1	Q12516	437 aa		4.14	□□□□□ -1.75
HHF1	YBR009C	RPS6A	P0CX37	236 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	RPS6B	P0CX38	236 aa	Predicted RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	STE6	P12866	1290 aa		4.13	□□□□□ -1.75
HHF1	YBR009C	VMA4	P22203	233 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	FUI1	P38196	639 aa		4.13	□□□□□ -1.75
HHF1	YBR009C	YHR020W	P38708	688 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	YHL008C	P38750	627 aa		4.13	□□□□□ -1.75
HHF1	YBR009C	SPF1	P39986	1215 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	CHZ1	P40019	153 aa	Predicted RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	PTK2	P47116	818 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	SUT1	P53032	299 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	ITC1	P53125	1264 aa		4.13	□□□□□ -1.75
HHF1	YBR009C	TYW3	P53177	273 aa		4.13	□□□□□ -1.75
HHF1	YBR009C	NOP14	Q99207	810 aa	Known RBP	4.13	□□□□□ -1.75
HHF1	YBR009C	ERR1	P0CX10	437 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	ERR2	P0CX11	437 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	CDC34	P14682	295 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	MRC1	P25588	1096 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	RAD27	P26793	382 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	YKL069W	P36088	180 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	VPS24	P36095	224 aa	Known RBP	4.12	□□□□□ -1.75
HHF1	YBR009C	CIC1	P38779	376 aa	Known RBP	4.12	□□□□□ -1.75
HHF1	YBR009C	ERP2	P39704	215 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	BOI2	P39969	1040 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	YNR029C	P53729	429 aa	Known RBP	4.12	□□□□□ -1.75
HHF1	YBR009C	TMA64	Q04600	565 aa	Known RBP	4.12	□□□□□ -1.75
HHF1	YBR009C	BRE1	Q07457	700 aa	Known RBP	4.12	□□□□□ -1.75
HHF1	YBR009C	NOC3	Q07896	663 aa	Predicted RBP	4.12	□□□□□ -1.75
HHF1	YBR009C	OPI10	Q08202	246 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	FLC1	Q08967	793 aa		4.12	□□□□□ -1.75
HHF1	YBR009C	ARG82	P07250	355 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	DAT1	P13483	248 aa	Known RBP	4.11	□□□□□ -1.75
HHF1	YBR009C	TRX2	P22803	104 aa	Known RBP	4.11	□□□□□ -1.75
HHF1	YBR009C	PWP2	P25635	923 aa	Known RBP	4.11	□□□□□ -1.75
HHF1	YBR009C	DUT1	P33317	147 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	PAF1	P38351	445 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	RSP5	P39940	809 aa	Known RBP	4.11	□□□□□ -1.75
HHF1	YBR009C	AIM21	P40563	679 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	AAD14	P42884	376 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	TY4A-J	P47023	414 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	PEX8	P53248	589 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	CEF1	Q03654	590 aa	Predicted RBP	4.11	□□□□□ -1.75
HHF1	YBR009C	ADR1	P07248	1323 aa		4.11	□□□□□ -1.75
HHF1	YBR009C	THS1	P04801	734 aa	Known RBP	4.1	□□□□□ -1.75
HHF1	YBR009C	SWI5	P08153	709 aa		4.1	□□□□□ -1.75
HHF1	YBR009C	PRE9	P23638	258 aa	Known RBP	4.1	□□□□□ -1.75
HHF1	YBR009C	UTR2	P32623	467 aa		4.1	□□□□□ -1.75
HHF1	YBR009C	MRPS18	P42847	217 aa		4.1	□□□□□ -1.75
HHF1	YBR009C	KIP3	P53086	805 aa	Known RBP	4.1	□□□□□ -1.75
HHF1	YBR009C	YGR053C	P53234	283 aa		4.1	□□□□□ -1.75
HHF1	YBR009C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
HHF1	YBR009C	DAL4	Q04895	635 aa		4.1	□□□□□ -1.75
HHF1	YBR009C	NKP1	Q12493	238 aa		4.1	□□□□□ -1.75
HHF1	YBR009C	CCP1	P00431	361 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	RPP2B	P02400	110 aa	Known RBP	4.09	□□□□□ -1.75
HHF1	YBR009C	DLD1	P32891	587 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	NUP85	P46673	744 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	BSC2	Q05611	235 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	YOR378W	Q08902	515 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	FAL1	Q12099	399 aa	Known RBP	4.09	□□□□□ -1.75
HHF1	YBR009C	MCD1	Q12158	566 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	WTM2	Q12206	467 aa		4.09	□□□□□ -1.75
HHF1	YBR009C	RPL8A	P17076	256 aa	Known RBP	4.08	□□□□□ -1.76
HHF1	YBR009C	MET22	P32179	357 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	MPE1	P35728	441 aa	Known RBP	4.08	□□□□□ -1.76
HHF1	YBR009C	TBS1	P38114	1094 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	DLD3	P39976	496 aa	Known RBP	4.08	□□□□□ -1.76
HHF1	YBR009C	YGR125W	P53273	1036 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	LSC2	P53312	427 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	RSC4	Q02206	625 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	SVL3	Q03088	825 aa	Known RBP	4.08	□□□□□ -1.76
HHF1	YBR009C	SPO20	Q04359	397 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	NTG2	Q08214	380 aa		4.08	□□□□□ -1.76
HHF1	YBR009C	CAN1	P04817	590 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	MRPL33	P20084	86 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	CDC11	P32458	415 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	SMC1	P32908	1225 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	STE5	P32917	917 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	PRP40	P33203	583 aa	Known RBP	4.07	□□□□□ -1.76
HHF1	YBR009C	YBR184W	P38299	523 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	HXT5	P38695	592 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	COG4	Q06096	861 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	INP54	Q08227	384 aa	Known RBP	4.07	□□□□□ -1.76
HHF1	YBR009C	SLX4	Q12098	748 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	TMA17	Q12513	150 aa		4.07	□□□□□ -1.76
HHF1	YBR009C	SFP1	P32432	683 aa		4.06	□□□□□ -1.76
HHF1	YBR009C	UTP7	P40055	554 aa	Known RBP	4.06	□□□□□ -1.76
HHF1	YBR009C	YJR098C	P47139	656 aa		4.06	□□□□□ -1.76
HHF1	YBR009C	YJR120W	P47157	116 aa		4.06	□□□□□ -1.76
HHF1	YBR009C	YPL109C	Q02981	657 aa		4.06	□□□□□ -1.76
HHF1	YBR009C	GIR2	Q03768	265 aa	Predicted RBP	4.06	□□□□□ -1.76
HHF1	YBR009C	YDR444W	Q04093	687 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms