RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
BRCC3-209ENST00000620502 ZNF710Q8N1W2 664 aa9.68□□□□□ -0.86
BRCC3-209ENST00000620502 KIF1BO60333 1816 aa9.68□□□□□ -0.86
BRCC3-209ENST00000620502 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
BRCC3-209ENST00000620502 GPR153Q6NV75 609 aa9.67□□□□□ -0.86
BRCC3-209ENST00000620502 STRCP1A6NGW2 1772 aa9.67□□□□□ -0.86
BRCC3-209ENST00000620502 POTEMA6NI47 508 aa9.66□□□□□ -0.86
BRCC3-209ENST00000620502 HOXB1P14653 301 aaPredicted RBP9.66□□□□□ -0.86
BRCC3-209ENST00000620502 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
BRCC3-209ENST00000620502 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
BRCC3-209ENST00000620502 CAMK2BQ13554 666 aa9.65□□□□□ -0.86
BRCC3-209ENST00000620502 NUTM2DQ5VT03 806 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-209ENST00000620502 PLEKHG1Q9ULL1 1385 aa9.64□□□□□ -0.87
BRCC3-209ENST00000620502 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCC3-209ENST00000620502 OXER1Q8TDS5 423 aa9.64□□□□□ -0.87
BRCC3-209ENST00000620502 SLC26A8Q96RN1 970 aa9.64□□□□□ -0.87
BRCC3-209ENST00000620502 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
BRCC3-209ENST00000620502 CPS1P31327 1500 aa9.63□□□□□ -0.87
BRCC3-209ENST00000620502 NEXMIFQ5QGS0 1516 aa9.63□□□□□ -0.87
BRCC3-209ENST00000620502 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
BRCC3-209ENST00000620502 FBXO41Q8TF61 875 aa9.63□□□□□ -0.87
BRCC3-209ENST00000620502 WDR70Q9NW82 654 aa9.63□□□□□ -0.87
BRCC3-209ENST00000620502 IQSEC2Q5JU85 1478 aa9.62□□□□□ -0.87
BRCC3-209ENST00000620502 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
BRCC3-209ENST00000620502 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
BRCC3-209ENST00000620502 EMILIN3Q9NT22 766 aa9.62□□□□□ -0.87
BRCC3-209ENST00000620502 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
BRCC3-209ENST00000620502 ADAMTS13Q76LX8 1427 aa9.62□□□□□ -0.87
BRCC3-209ENST00000620502 NRXN3Q9Y4C0 1643 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 PPLO60437 1756 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 KHSRPQ92945 711 aaKnown RBP eCLIP9.61□□□□□ -0.872e-6■■□□□ 14.2
BRCC3-209ENST00000620502 BCANQ96GW7 911 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 TBX22Q9Y458 520 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 SPATA31E1Q6ZUB1 1445 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
BRCC3-209ENST00000620502 CHD2O14647 1828 aaKnown RBP9.61□□□□□ -0.87
BRCC3-209ENST00000620502 RPGRIP1LQ68CZ1 1315 aa9.6□□□□□ -0.87
BRCC3-209ENST00000620502 KCNA6P17658 529 aa9.6□□□□□ -0.87
BRCC3-209ENST00000620502 TRIM26Q12899 539 aaPredicted RBP9.6□□□□□ -0.87
BRCC3-209ENST00000620502 POTEGQ6S5H5 508 aa9.6□□□□□ -0.87
BRCC3-209ENST00000620502 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
BRCC3-209ENST00000620502 PCDH10Q9P2E7 1040 aa9.6□□□□□ -0.87
BRCC3-209ENST00000620502 XIRP1Q702N8 1843 aaKnown RBP9.6□□□□□ -0.87
BRCC3-209ENST00000620502 IFT172Q9UG01 1749 aa9.59□□□□□ -0.87
BRCC3-209ENST00000620502 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
BRCC3-209ENST00000620502 E2F4Q16254 413 aa9.59□□□□□ -0.87
BRCC3-209ENST00000620502 UPF1Q92900 1129 aaKnown RBP eCLIP9.59□□□□□ -0.87
BRCC3-209ENST00000620502 KDM2AQ9Y2K7 1162 aa9.59□□□□□ -0.87
BRCC3-209ENST00000620502 DIP2AQ14689 1571 aa9.58□□□□□ -0.88
BRCC3-209ENST00000620502 NWD1Q149M9 1564 aa9.58□□□□□ -0.88
BRCC3-209ENST00000620502 TBC1D12O60347 775 aa9.58□□□□□ -0.88
BRCC3-209ENST00000620502 RGL3Q3MIN7 710 aa9.57□□□□□ -0.88
BRCC3-209ENST00000620502 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
BRCC3-209ENST00000620502 PTPRUQ92729 1446 aa9.56□□□□□ -0.88
BRCC3-209ENST00000620502 SETD1AO15047 1707 aaKnown RBP9.56□□□□□ -0.88
BRCC3-209ENST00000620502 PIK3R4Q99570 1358 aa9.56□□□□□ -0.88
BRCC3-209ENST00000620502 NUDT7P0C024 238 aa9.56□□□□□ -0.88
BRCC3-209ENST00000620502 EMP3P54852 163 aa9.56□□□□□ -0.88
BRCC3-209ENST00000620502 ALKQ9UM73 1620 aa9.56□□□□□ -0.88
BRCC3-209ENST00000620502 ADGRF5Q8IZF2 1346 aa9.56□□□□□ -0.88
BRCC3-209ENST00000620502 NKTRP30414 1462 aaKnown RBP9.55□□□□□ -0.88
BRCC3-209ENST00000620502 METP08581 1390 aa9.55□□□□□ -0.88
BRCC3-209ENST00000620502 ARIH1Q9Y4X5 557 aaPredicted RBP9.55□□□□□ -0.88
BRCC3-209ENST00000620502 TMEM94Q12767 1356 aa9.54□□□□□ -0.88
BRCC3-209ENST00000620502 MAP3K9P80192 1104 aa9.54□□□□□ -0.88
BRCC3-209ENST00000620502 PROSER2Q86WR7 435 aaPredicted RBP9.54□□□□□ -0.88
BRCC3-209ENST00000620502 RBM33Q96EV2 1170 aaKnown RBP9.54□□□□□ -0.88
BRCC3-209ENST00000620502 AMOTL2Q9Y2J4 779 aa9.54□□□□□ -0.88
BRCC3-209ENST00000620502 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
BRCC3-209ENST00000620502 UBAP1LF5GYI3 381 aa9.53□□□□□ -0.88
BRCC3-209ENST00000620502 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
BRCC3-209ENST00000620502 POTEB3A0JP26 581 aa9.52□□□□□ -0.89
BRCC3-209ENST00000620502 DPYSL4O14531 572 aa9.52□□□□□ -0.89
BRCC3-209ENST00000620502 POTEBQ6S5H4 581 aa9.52□□□□□ -0.89
BRCC3-209ENST00000620502 ANO8Q9HCE9 1232 aaPredicted RBP9.52□□□□□ -0.89
BRCC3-209ENST00000620502 MYOM2P54296 1465 aa9.52□□□□□ -0.89
BRCC3-209ENST00000620502 DHX57Q6P158 1386 aaKnown RBP9.51□□□□□ -0.89
BRCC3-209ENST00000620502 PIK3C2GO75747 1445 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 FAM205CA6NFA0 338 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
BRCC3-209ENST00000620502 EVI5O60447 810 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 TOM1O60784 492 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 KCNV2Q8TDN2 545 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 LHX6Q9UPM6 363 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 ERBB3P21860 1342 aa9.51□□□□□ -0.89
BRCC3-209ENST00000620502 NCOA3Q9Y6Q9 1424 aa9.5□□□□□ -0.89
BRCC3-209ENST00000620502 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
BRCC3-209ENST00000620502 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
BRCC3-209ENST00000620502 C14orf93Q9H972 538 aaKnown RBP9.49□□□□□ -0.89
BRCC3-209ENST00000620502 ASXL1Q8IXJ9 1541 aa9.49□□□□□ -0.89
BRCC3-209ENST00000620502 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
BRCC3-209ENST00000620502 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.48□□□□□ -0.89
BRCC3-209ENST00000620502 PIP4K2BP78356 416 aa9.48□□□□□ -0.89
BRCC3-209ENST00000620502 VARS2Q5ST30 1063 aaKnown RBP9.48□□□□□ -0.89
BRCC3-209ENST00000620502 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
BRCC3-209ENST00000620502 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
BRCC3-209ENST00000620502 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
BRCC3-209ENST00000620502 ROBO2Q9HCK4 1378 aa9.48□□□□□ -0.89
BRCC3-209ENST00000620502 LAMC1P11047 1609 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms