RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
PSEN1-215ENST00000556011 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
PSEN1-215ENST00000556011 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
PSEN1-215ENST00000556011 EHBP1L1Q8N3D4 1523 aa13.29□□□□□ -0.28
PSEN1-215ENST00000556011 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
PSEN1-215ENST00000556011 POLD1P28340 1107 aa13.27□□□□□ -0.29
PSEN1-215ENST00000556011 BTG4Q9NY30 223 aa13.27□□□□□ -0.29
PSEN1-215ENST00000556011 NPHP3Q7Z494 1330 aa13.27□□□□□ -0.29
PSEN1-215ENST00000556011 PDE3BQ13370 1112 aa13.26□□□□□ -0.29
PSEN1-215ENST00000556011 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
PSEN1-215ENST00000556011 SMC1BQ8NDV3 1235 aa13.25□□□□□ -0.29
PSEN1-215ENST00000556011 ZFYVE9O95405 1425 aa13.24□□□□□ -0.29
PSEN1-215ENST00000556011 UNC80Q8N2C7 3258 aa13.24□□□□□ -0.29
PSEN1-215ENST00000556011 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
PSEN1-215ENST00000556011 WBP1LQ9NX94 342 aa13.23□□□□□ -0.29
PSEN1-215ENST00000556011 PLEKHH2Q8IVE3 1493 aa13.23□□□□□ -0.29
PSEN1-215ENST00000556011 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
PSEN1-215ENST00000556011 ADAMTS7Q9UKP4 1686 aa13.22□□□□□ -0.29
PSEN1-215ENST00000556011 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-215ENST00000556011 FOXO3O43524 673 aa13.22□□□□□ -0.29
PSEN1-215ENST00000556011 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
PSEN1-215ENST00000556011 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
PSEN1-215ENST00000556011 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
PSEN1-215ENST00000556011 SBF2Q86WG5 1849 aa13.21□□□□□ -0.29
PSEN1-215ENST00000556011 SOX10P56693 466 aa13.21□□□□□ -0.29
PSEN1-215ENST00000556011 PTF1AQ7RTS3 328 aa13.21□□□□□ -0.29
PSEN1-215ENST00000556011 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
PSEN1-215ENST00000556011 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
PSEN1-215ENST00000556011 SNX27Q96L92 541 aa13.2□□□□□ -0.3
PSEN1-215ENST00000556011 MEGF6O75095 1541 aa13.18□□□□□ -0.3
PSEN1-215ENST00000556011 SPATA31A3Q5VYP0 1347 aa13.18□□□□□ -0.3
PSEN1-215ENST00000556011 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
PSEN1-215ENST00000556011 MCOLN1Q9GZU1 580 aa13.18□□□□□ -0.3
PSEN1-215ENST00000556011 LRRIQ1Q96JM4 1722 aa13.18□□□□□ -0.3
PSEN1-215ENST00000556011 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
PSEN1-215ENST00000556011 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
PSEN1-215ENST00000556011 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
PSEN1-215ENST00000556011 ARHGAP31Q2M1Z3 1444 aa13.15□□□□□ -0.3
PSEN1-215ENST00000556011 ESCO1Q5FWF5 840 aa13.15□□□□□ -0.3
PSEN1-215ENST00000556011 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
PSEN1-215ENST00000556011 SPATA31A1Q5TZJ5 1347 aa13.14□□□□□ -0.31
PSEN1-215ENST00000556011 LMTK2Q8IWU2 1503 aa13.14□□□□□ -0.31
PSEN1-215ENST00000556011 VCANP13611 3396 aa13.13□□□□□ -0.31
PSEN1-215ENST00000556011 PXDNLA1KZ92 1463 aa13.13□□□□□ -0.31
PSEN1-215ENST00000556011 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
PSEN1-215ENST00000556011 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
PSEN1-215ENST00000556011 CFDP1Q9UEE9 299 aaPredicted RBP13.11□□□□□ -0.31
PSEN1-215ENST00000556011 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
PSEN1-215ENST00000556011 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
PSEN1-215ENST00000556011 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
PSEN1-215ENST00000556011 KCPQ6ZWJ8 1503 aa13.1□□□□□ -0.31
PSEN1-215ENST00000556011 SLC16A10Q8TF71 515 aa13.1□□□□□ -0.31
PSEN1-215ENST00000556011 ZNF644Q9H582 1327 aaPredicted RBP13.1□□□□□ -0.31
PSEN1-215ENST00000556011 VEGFBP49765 207 aa13.09□□□□□ -0.31
PSEN1-215ENST00000556011 COL25A1Q9BXS0 654 aaPredicted RBP13.09□□□□□ -0.31
PSEN1-215ENST00000556011 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
PSEN1-215ENST00000556011 TECPR2O15040 1411 aa13.08□□□□□ -0.32
PSEN1-215ENST00000556011 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
PSEN1-215ENST00000556011 DUOX2Q9NRD8 1548 aa13.08□□□□□ -0.32
PSEN1-215ENST00000556011 PEAK1Q9H792 1746 aa13.08□□□□□ -0.32
PSEN1-215ENST00000556011 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
PSEN1-215ENST00000556011 NBPF15Q8N660 670 aa13.07□□□□□ -0.32
PSEN1-215ENST00000556011 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
PSEN1-215ENST00000556011 TRIOBPQ9H2D6 2365 aa13.07□□□□□ -0.32
PSEN1-215ENST00000556011 SPTBN5Q9NRC6 3674 aaKnown RBP13.06□□□□□ -0.32
PSEN1-215ENST00000556011 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
PSEN1-215ENST00000556011 COL9A1P20849 921 aa13.06□□□□□ -0.32
PSEN1-215ENST00000556011 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
PSEN1-215ENST00000556011 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
PSEN1-215ENST00000556011 CASP8AP2Q9UKL3 1982 aa13.05□□□□□ -0.32
PSEN1-215ENST00000556011 PAPPAQ13219 1627 aa13.05□□□□□ -0.32
PSEN1-215ENST00000556011 PHRF1Q9P1Y6 1649 aaKnown RBP13.05□□□□□ -0.32
PSEN1-215ENST00000556011 LRPPRCP42704 1394 aaKnown RBP13.05□□□□□ -0.32
PSEN1-215ENST00000556011 PKD1L2Q7Z442 2459 aa13.04□□□□□ -0.32
PSEN1-215ENST00000556011 KDM2BQ8NHM5 1336 aa13.04□□□□□ -0.32
PSEN1-215ENST00000556011 PLA2G5P39877 138 aa13.03□□□□□ -0.32
PSEN1-215ENST00000556011 RAPGEFL1Q9UHV5 662 aa13.03□□□□□ -0.32
PSEN1-215ENST00000556011 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
PSEN1-215ENST00000556011 GCC2Q8IWJ2 1684 aa13.02□□□□□ -0.32
PSEN1-215ENST00000556011 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
PSEN1-215ENST00000556011 DGKZQ13574 1117 aa13.02□□□□□ -0.33
PSEN1-215ENST00000556011 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
PSEN1-215ENST00000556011 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
PSEN1-215ENST00000556011 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.01□□□□□ -0.33
PSEN1-215ENST00000556011 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
PSEN1-215ENST00000556011 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
PSEN1-215ENST00000556011 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
PSEN1-215ENST00000556011 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
PSEN1-215ENST00000556011 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
PSEN1-215ENST00000556011 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
PSEN1-215ENST00000556011 KRT28Q7Z3Y7 464 aa12.99□□□□□ -0.33
PSEN1-215ENST00000556011 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
PSEN1-215ENST00000556011 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
PSEN1-215ENST00000556011 PKD1L3Q7Z443 1732 aa12.98□□□□□ -0.33
PSEN1-215ENST00000556011 EIF2AK4Q9P2K8 1649 aaKnown RBP12.98□□□□□ -0.33
PSEN1-215ENST00000556011 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
PSEN1-215ENST00000556011 MAP2K1Q02750 393 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-215ENST00000556011 FAM122AQ96E09 287 aa12.97□□□□□ -0.33
PSEN1-215ENST00000556011 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
PSEN1-215ENST00000556011 TSKSQ9UJT2 592 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms