RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.38
LDHA-220ENST00000542179 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
LDHA-220ENST00000542179 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
LDHA-220ENST00000542179 WASLO00401 505 aaPredicted RBP12.64□□□□□ -0.39
LDHA-220ENST00000542179 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
LDHA-220ENST00000542179 MS4A3Q96HJ5 214 aa12.64□□□□□ -0.39
LDHA-220ENST00000542179 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
LDHA-220ENST00000542179 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
LDHA-220ENST00000542179 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
LDHA-220ENST00000542179 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
LDHA-220ENST00000542179 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
LDHA-220ENST00000542179 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
LDHA-220ENST00000542179 RALBP1Q15311 655 aa12.62□□□□□ -0.39
LDHA-220ENST00000542179 KCNA6P17658 529 aa12.61□□□□□ -0.39
LDHA-220ENST00000542179 SLC12A5Q9H2X9 1139 aa12.61□□□□□ -0.39
LDHA-220ENST00000542179 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
LDHA-220ENST00000542179 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
LDHA-220ENST00000542179 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
LDHA-220ENST00000542179 PARD3Q8TEW0 1356 aa12.6□□□□□ -0.39
LDHA-220ENST00000542179 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
LDHA-220ENST00000542179 CARD14Q9BXL6 1004 aa12.6□□□□□ -0.39
LDHA-220ENST00000542179 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
LDHA-220ENST00000542179 LHX8Q68G74 356 aa12.59□□□□□ -0.39
LDHA-220ENST00000542179 HSPA2P54652 639 aa12.58□□□□□ -0.4
LDHA-220ENST00000542179 USP32Q8NFA0 1604 aa12.58□□□□□ -0.4
LDHA-220ENST00000542179 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
LDHA-220ENST00000542179 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
LDHA-220ENST00000542179 ATP7BP35670 1465 aa12.57□□□□□ -0.4
LDHA-220ENST00000542179 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
LDHA-220ENST00000542179 STRCQ7RTU9 1775 aa12.56□□□□□ -0.4
LDHA-220ENST00000542179 MAP3K13O43283 966 aa12.56□□□□□ -0.4
LDHA-220ENST00000542179 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
LDHA-220ENST00000542179 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
LDHA-220ENST00000542179 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
LDHA-220ENST00000542179 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
LDHA-220ENST00000542179 A0A1W2PP64 1363 aa12.55□□□□□ -0.4
LDHA-220ENST00000542179 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
LDHA-220ENST00000542179 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
LDHA-220ENST00000542179 HDGFL2Q7Z4V5 671 aaPredicted RBP12.54□□□□□ -0.4
LDHA-220ENST00000542179 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 NSD2O96028 1365 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 ANKARQ7Z5J8 1434 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 NCOA3Q9Y6Q9 1424 aa12.54□□□□□ -0.4
LDHA-220ENST00000542179 PLEKHG3A1L390 1219 aa12.53□□□□□ -0.4
LDHA-220ENST00000542179 SGIP1Q9BQI5 828 aa12.53□□□□□ -0.4
LDHA-220ENST00000542179 TOPAZ1Q8N9V7 1692 aa12.53□□□□□ -0.4
LDHA-220ENST00000542179 CGNL1Q0VF96 1302 aa12.53□□□□□ -0.4
LDHA-220ENST00000542179 BRD4O60885 1362 aaPredicted RBP12.53□□□□□ -0.4
LDHA-220ENST00000542179 ADGRL3Q9HAR2 1447 aa12.53□□□□□ -0.4
LDHA-220ENST00000542179 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
LDHA-220ENST00000542179 NLRP13Q86W25 1043 aa12.52□□□□□ -0.41
LDHA-220ENST00000542179 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
LDHA-220ENST00000542179 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
LDHA-220ENST00000542179 ASTLQ6HA08 431 aaPredicted RBP12.51□□□□□ -0.41
LDHA-220ENST00000542179 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
LDHA-220ENST00000542179 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
LDHA-220ENST00000542179 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
LDHA-220ENST00000542179 PROSER2Q86WR7 435 aaPredicted RBP12.5□□□□□ -0.41
LDHA-220ENST00000542179 PCDHB13Q9Y5F0 798 aa12.5□□□□□ -0.41
LDHA-220ENST00000542179 AKAP12Q02952 1782 aa12.5□□□□□ -0.41
LDHA-220ENST00000542179 STRCP1A6NGW2 1772 aa12.49□□□□□ -0.41
LDHA-220ENST00000542179 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
LDHA-220ENST00000542179 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
LDHA-220ENST00000542179 MON2Q7Z3U7 1717 aa12.48□□□□□ -0.41
LDHA-220ENST00000542179 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
LDHA-220ENST00000542179 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
LDHA-220ENST00000542179 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
LDHA-220ENST00000542179 ACEP12821 1306 aa12.47□□□□□ -0.41
LDHA-220ENST00000542179 FYB1O15117 783 aa12.47□□□□□ -0.41
LDHA-220ENST00000542179 GSE1Q14687 1217 aa12.47□□□□□ -0.41
LDHA-220ENST00000542179 PNISRQ8TF01 805 aaKnown RBP12.47□□□□□ -0.41
LDHA-220ENST00000542179 ANKRD26Q9UPS8 1709 aa12.46□□□□□ -0.41
LDHA-220ENST00000542179 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
LDHA-220ENST00000542179 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.42
LDHA-220ENST00000542179 DCCP43146 1447 aa12.45□□□□□ -0.42
LDHA-220ENST00000542179 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
LDHA-220ENST00000542179 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
LDHA-220ENST00000542179 TIE1P35590 1138 aa12.45□□□□□ -0.42
LDHA-220ENST00000542179 PELP1Q8IZL8 1130 aaKnown RBP12.45□□□□□ -0.42
LDHA-220ENST00000542179 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
LDHA-220ENST00000542179 RBM33Q96EV2 1170 aaKnown RBP12.45□□□□□ -0.42
LDHA-220ENST00000542179 USP6P35125 1406 aa12.45□□□□□ -0.42
LDHA-220ENST00000542179 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
LDHA-220ENST00000542179 NUTM2FA1L443 756 aa12.44□□□□□ -0.42
LDHA-220ENST00000542179 C7P10643 843 aa12.44□□□□□ -0.42
LDHA-220ENST00000542179 C14orf37Q86TY3 774 aa12.44□□□□□ -0.42
LDHA-220ENST00000542179 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
LDHA-220ENST00000542179 INSRP06213 1382 aa12.43□□□□□ -0.42
LDHA-220ENST00000542179 NRKQ7Z2Y5 1582 aa12.43□□□□□ -0.42
LDHA-220ENST00000542179 SPOCK2Q92563 424 aa12.43□□□□□ -0.42
LDHA-220ENST00000542179 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
LDHA-220ENST00000542179 TTC21BQ7Z4L5 1316 aa12.42□□□□□ -0.42
LDHA-220ENST00000542179 TTC21AQ8NDW8 1320 aa12.42□□□□□ -0.42
LDHA-220ENST00000542179 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
LDHA-220ENST00000542179 NGDNQ8NEJ9 315 aaKnown RBP12.42□□□□□ -0.42
LDHA-220ENST00000542179 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
LDHA-220ENST00000542179 BMP2KQ9NSY1 1161 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms