RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RXRBP28702 533 aa13.71□□□□□ -0.21
CTNNA1-221ENST00000520339 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
CTNNA1-221ENST00000520339 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-221ENST00000520339 KIF1BO60333 1816 aa13.71□□□□□ -0.22
CTNNA1-221ENST00000520339 AFF2P51816 1311 aa13.7□□□□□ -0.22
CTNNA1-221ENST00000520339 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
CTNNA1-221ENST00000520339 ESCO1Q5FWF5 840 aa13.7□□□□□ -0.22
CTNNA1-221ENST00000520339 TECPR2O15040 1411 aa13.7□□□□□ -0.22
CTNNA1-221ENST00000520339 C8orf37Q96NL8 207 aa13.69□□□□□ -0.22
CTNNA1-221ENST00000520339 PIK3C2GO75747 1445 aa13.69□□□□□ -0.22
CTNNA1-221ENST00000520339 RAB3GAP2Q9H2M9 1393 aa13.69□□□□□ -0.22
CTNNA1-221ENST00000520339 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
CTNNA1-221ENST00000520339 SETD1AO15047 1707 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-221ENST00000520339 CFAP70Q5T0N1 1121 aa13.68□□□□□ -0.22
CTNNA1-221ENST00000520339 SHPRHQ149N8 1683 aa13.68□□□□□ -0.22
CTNNA1-221ENST00000520339 FOXO3O43524 673 aa13.67□□□□□ -0.22
CTNNA1-221ENST00000520339 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
CTNNA1-221ENST00000520339 PSEN1P49768 467 aa13.67□□□□□ -0.22
CTNNA1-221ENST00000520339 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-221ENST00000520339 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 YTHDC2Q9H6S0 1430 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 NUTM2FA1L443 756 aa13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 HRCP23327 699 aa13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 NGLY1Q96IV0 654 aa13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 QTRT2Q9H974 415 aaKnown RBP13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 NALCNQ8IZF0 1738 aa13.66□□□□□ -0.22
CTNNA1-221ENST00000520339 PPLO60437 1756 aa13.65□□□□□ -0.22
CTNNA1-221ENST00000520339 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
CTNNA1-221ENST00000520339 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
CTNNA1-221ENST00000520339 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-221ENST00000520339 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
CTNNA1-221ENST00000520339 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTNNA1-221ENST00000520339 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
CTNNA1-221ENST00000520339 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
CTNNA1-221ENST00000520339 NBR1Q14596 966 aa13.62□□□□□ -0.23
CTNNA1-221ENST00000520339 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
CTNNA1-221ENST00000520339 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
CTNNA1-221ENST00000520339 CDK12Q9NYV4 1490 aaPredicted RBP13.61□□□□□ -0.23
CTNNA1-221ENST00000520339 LAMC1P11047 1609 aa13.61□□□□□ -0.23
CTNNA1-221ENST00000520339 MAP3K13O43283 966 aa13.61□□□□□ -0.23
CTNNA1-221ENST00000520339 PRAM1Q96QH2 718 aa13.61□□□□□ -0.23
CTNNA1-221ENST00000520339 USP21Q9UK80 565 aa13.61□□□□□ -0.23
CTNNA1-221ENST00000520339 MYOM2P54296 1465 aa13.61□□□□□ -0.23
CTNNA1-221ENST00000520339 KIF12Q96FN5 646 aa13.6□□□□□ -0.23
CTNNA1-221ENST00000520339 PXDNQ92626 1479 aa13.6□□□□□ -0.23
CTNNA1-221ENST00000520339 SAFB2Q14151 953 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTNNA1-221ENST00000520339 KRT28Q7Z3Y7 464 aa13.59□□□□□ -0.23
CTNNA1-221ENST00000520339 STAC3Q96MF2 364 aa13.59□□□□□ -0.23
CTNNA1-221ENST00000520339 TRPC5Q9UL62 973 aaPredicted RBP13.59□□□□□ -0.23
CTNNA1-221ENST00000520339 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
CTNNA1-221ENST00000520339 TPRNQ4KMQ1 711 aa13.58□□□□□ -0.24
CTNNA1-221ENST00000520339 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
CTNNA1-221ENST00000520339 POGKQ9P215 609 aa13.58□□□□□ -0.24
CTNNA1-221ENST00000520339 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
CTNNA1-221ENST00000520339 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
CTNNA1-221ENST00000520339 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
CTNNA1-221ENST00000520339 RGS12O14924 1447 aa13.56□□□□□ -0.24
CTNNA1-221ENST00000520339 CD44P16070 742 aaKnown RBP13.55□□□□□ -0.24
CTNNA1-221ENST00000520339 PSME1Q06323 249 aa13.55□□□□□ -0.24
CTNNA1-221ENST00000520339 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
CTNNA1-221ENST00000520339 ATRNO75882 1429 aa13.55□□□□□ -0.24
CTNNA1-221ENST00000520339 BCL9LQ86UU0 1499 aa13.54□□□□□ -0.24
CTNNA1-221ENST00000520339 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
CTNNA1-221ENST00000520339 DLC1Q96QB1 1528 aa13.53□□□□□ -0.24
CTNNA1-221ENST00000520339 ADGRB1O14514 1584 aa13.53□□□□□ -0.24
CTNNA1-221ENST00000520339 UNC5CLQ8IV45 518 aa13.52□□□□□ -0.25
CTNNA1-221ENST00000520339 PMFBP1Q8TBY8 1022 aa13.52□□□□□ -0.25
CTNNA1-221ENST00000520339 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-221ENST00000520339 HIRIP3Q9BW71 556 aaPredicted RBP13.52□□□□□ -0.25
CTNNA1-221ENST00000520339 SBNO1A3KN83 1393 aa13.52□□□□□ -0.25
CTNNA1-221ENST00000520339 KNDC1Q76NI1 1749 aa13.52□□□□□ -0.25
CTNNA1-221ENST00000520339 ANKARQ7Z5J8 1434 aa13.51□□□□□ -0.25
CTNNA1-221ENST00000520339 MINK1Q8N4C8 1332 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-221ENST00000520339 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
CTNNA1-221ENST00000520339 CABLES1Q8TDN4 633 aa13.51□□□□□ -0.25
CTNNA1-221ENST00000520339 CABP2Q9NPB3 220 aa13.51□□□□□ -0.25
CTNNA1-221ENST00000520339 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-221ENST00000520339 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
CTNNA1-221ENST00000520339 PHF12Q96QT6 1004 aa13.5□□□□□ -0.25
CTNNA1-221ENST00000520339 TNS3Q68CZ2 1445 aa13.49□□□□□ -0.25
CTNNA1-221ENST00000520339 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
CTNNA1-221ENST00000520339 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
CTNNA1-221ENST00000520339 SLIT2O94813 1529 aa13.48□□□□□ -0.25
CTNNA1-221ENST00000520339 FMN2Q9NZ56 1722 aa13.47□□□□□ -0.25
CTNNA1-221ENST00000520339 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
CTNNA1-221ENST00000520339 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
CTNNA1-221ENST00000520339 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-221ENST00000520339 FAM83GA6ND36 823 aa13.46□□□□□ -0.25
CTNNA1-221ENST00000520339 GPRASP1Q5JY77 1395 aa13.45□□□□□ -0.26
CTNNA1-221ENST00000520339 VPS72Q15906 364 aa13.45□□□□□ -0.26
CTNNA1-221ENST00000520339 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
CTNNA1-221ENST00000520339 NLRP6P59044 892 aa13.44□□□□□ -0.26
CTNNA1-221ENST00000520339 NBPF1Q3BBV0 1214 aa13.44□□□□□ -0.26
CTNNA1-221ENST00000520339 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-221ENST00000520339 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
CTNNA1-221ENST00000520339 WDR70Q9NW82 654 aa13.44□□□□□ -0.26
CTNNA1-221ENST00000520339 RALGAPBQ86X10 1494 aa13.43□□□□□ -0.26
CTNNA1-221ENST00000520339 SOX12O15370 315 aa13.43□□□□□ -0.26
CTNNA1-221ENST00000520339 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
CTNNA1-221ENST00000520339 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms