RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.94■□□□□ 0.62
SDHA-215ENST00000512962 ZFP91Q96JP5 570 aaPredicted RBP18.94■□□□□ 0.62
SDHA-215ENST00000512962 FARP1Q9Y4F1 1045 aaPredicted RBP18.94■□□□□ 0.62
SDHA-215ENST00000512962 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
SDHA-215ENST00000512962 BLMP54132 1417 aaPredicted RBP18.92■□□□□ 0.62
SDHA-215ENST00000512962 GJD4Q96KN9 370 aaPredicted RBP18.92■□□□□ 0.62
SDHA-215ENST00000512962 PPLO60437 1756 aa18.91■□□□□ 0.62
SDHA-215ENST00000512962 SLIT2O94813 1529 aa18.91■□□□□ 0.62
SDHA-215ENST00000512962 GTPBP6O43824 516 aaPredicted RBP18.91■□□□□ 0.62
SDHA-215ENST00000512962 CCDC125Q86Z20 511 aa18.91■□□□□ 0.62
SDHA-215ENST00000512962 TSPYL2Q9H2G4 693 aaPredicted RBP18.91■□□□□ 0.62
SDHA-215ENST00000512962 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
SDHA-215ENST00000512962 PLCH1Q4KWH8 1693 aa18.9■□□□□ 0.62
SDHA-215ENST00000512962 BCL11BQ9C0K0 894 aaPredicted RBP18.9■□□□□ 0.62
SDHA-215ENST00000512962 STK24Q9Y6E0 443 aa18.89■□□□□ 0.61
SDHA-215ENST00000512962 ABCA3Q99758 1704 aa18.88■□□□□ 0.61
SDHA-215ENST00000512962 PRKAR2AP13861 404 aaKnown RBP18.86■□□□□ 0.61
SDHA-215ENST00000512962 HFM1A2PYH4 1435 aa18.85■□□□□ 0.61
SDHA-215ENST00000512962 NPHP3Q7Z494 1330 aa18.85■□□□□ 0.61
SDHA-215ENST00000512962 ITGAEP38570 1179 aa18.85■□□□□ 0.61
SDHA-215ENST00000512962 FMN2Q9NZ56 1722 aa18.85■□□□□ 0.61
SDHA-215ENST00000512962 RGPD8O14715 1765 aaPredicted RBP18.84■□□□□ 0.61
SDHA-215ENST00000512962 FOXO3O43524 673 aa18.84■□□□□ 0.61
SDHA-215ENST00000512962 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
SDHA-215ENST00000512962 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.6
SDHA-215ENST00000512962 NAIPQ13075 1403 aa18.83■□□□□ 0.6
SDHA-215ENST00000512962 NUTM2FA1L443 756 aa18.82■□□□□ 0.6
SDHA-215ENST00000512962 UNC5CLQ8IV45 518 aa18.82■□□□□ 0.6
SDHA-215ENST00000512962 NWD2Q9ULI1 1742 aa18.81■□□□□ 0.6
SDHA-215ENST00000512962 FXR2P51116 673 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■■□□□ 11.7
SDHA-215ENST00000512962 NRAPQ86VF7 1730 aa18.8■□□□□ 0.6
SDHA-215ENST00000512962 PLEKHH1Q9ULM0 1364 aa18.8■□□□□ 0.6
SDHA-215ENST00000512962 KIF1AQ12756 1690 aa18.79■□□□□ 0.6
SDHA-215ENST00000512962 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
SDHA-215ENST00000512962 KNDC1Q76NI1 1749 aa18.79■□□□□ 0.6
SDHA-215ENST00000512962 IFT172Q9UG01 1749 aa18.78■□□□□ 0.6
SDHA-215ENST00000512962 SPATA31A3Q5VYP0 1347 aa18.77■□□□□ 0.6
SDHA-215ENST00000512962 ZNF467Q7Z7K2 595 aaPredicted RBP18.77■□□□□ 0.6
SDHA-215ENST00000512962 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
SDHA-215ENST00000512962 HRCP23327 699 aa18.76■□□□□ 0.59
SDHA-215ENST00000512962 TECPR2O15040 1411 aa18.75■□□□□ 0.59
SDHA-215ENST00000512962 WAPLQ7Z5K2 1190 aa18.75■□□□□ 0.59
SDHA-215ENST00000512962 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
SDHA-215ENST00000512962 CCDC61Q9Y6R9 512 aa18.74■□□□□ 0.59
SDHA-215ENST00000512962 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
SDHA-215ENST00000512962 VPS72Q15906 364 aa18.72■□□□□ 0.59
SDHA-215ENST00000512962 TNS3Q68CZ2 1445 aa18.72■□□□□ 0.59
SDHA-215ENST00000512962 ONECUT3O60422 494 aaPredicted RBP18.71■□□□□ 0.59
SDHA-215ENST00000512962 KRT27Q7Z3Y8 459 aa18.71■□□□□ 0.59
SDHA-215ENST00000512962 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
SDHA-215ENST00000512962 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
SDHA-215ENST00000512962 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
SDHA-215ENST00000512962 PRKCSHP14314 528 aaPredicted RBP18.7■□□□□ 0.58
SDHA-215ENST00000512962 SF3B2Q13435 895 aaKnown RBP18.7■□□□□ 0.58
SDHA-215ENST00000512962 STK26Q9P289 416 aa18.7■□□□□ 0.58
SDHA-215ENST00000512962 RYDENQ9NUL5 291 aaKnown RBP18.69■□□□□ 0.58
SDHA-215ENST00000512962 PCDHB8Q9UN66 801 aa18.69■□□□□ 0.58
SDHA-215ENST00000512962 PCDHB13Q9Y5F0 798 aa18.69■□□□□ 0.58
SDHA-215ENST00000512962 PDAP1Q13442 181 aaKnown RBP18.68■□□□□ 0.58
SDHA-215ENST00000512962 FAM182BQ5T319 152 aa18.68■□□□□ 0.58
SDHA-215ENST00000512962 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
SDHA-215ENST00000512962 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
SDHA-215ENST00000512962 TRPM3Q9HCF6 1732 aaPredicted RBP18.68■□□□□ 0.58
SDHA-215ENST00000512962 RRBP1Q9P2E9 1410 aaKnown RBP18.67■□□□□ 0.58
SDHA-215ENST00000512962 THSD7AQ9UPZ6 1657 aa18.67■□□□□ 0.58
SDHA-215ENST00000512962 CRYBG1Q9Y4K1 1723 aa18.67■□□□□ 0.58
SDHA-215ENST00000512962 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
SDHA-215ENST00000512962 RPGRIP1LQ68CZ1 1315 aa18.67■□□□□ 0.58
SDHA-215ENST00000512962 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
SDHA-215ENST00000512962 CHRDL2Q6WN34 429 aa18.66■□□□□ 0.58
SDHA-215ENST00000512962 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
SDHA-215ENST00000512962 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
SDHA-215ENST00000512962 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
SDHA-215ENST00000512962 BAG6P46379 1132 aa18.64■□□□□ 0.57
SDHA-215ENST00000512962 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
SDHA-215ENST00000512962 FAM83GA6ND36 823 aa18.63■□□□□ 0.57
SDHA-215ENST00000512962 FAM98CQ17RN3 349 aaKnown RBP18.63■□□□□ 0.57
SDHA-215ENST00000512962 PIP4P2Q8N4L2 257 aa18.63■□□□□ 0.57
SDHA-215ENST00000512962 ABCC11Q96J66 1382 aa18.63■□□□□ 0.57
SDHA-215ENST00000512962 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
SDHA-215ENST00000512962 COL14A1Q05707 1796 aaKnown RBP18.62■□□□□ 0.57
SDHA-215ENST00000512962 RREB1Q92766 1687 aa18.61■□□□□ 0.57
SDHA-215ENST00000512962 PIK3C2GO75747 1445 aa18.61■□□□□ 0.57
SDHA-215ENST00000512962 YTHDC2Q9H6S0 1430 aaKnown RBP18.61■□□□□ 0.57
SDHA-215ENST00000512962 ZNF579Q8NAF0 562 aaKnown RBP18.61■□□□□ 0.57
SDHA-215ENST00000512962 NUP188Q5SRE5 1749 aa18.6■□□□□ 0.57
SDHA-215ENST00000512962 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
SDHA-215ENST00000512962 A0A0G2JS52 829 aa18.6■□□□□ 0.57
SDHA-215ENST00000512962 MYT1Q01538 1121 aa18.6■□□□□ 0.57
SDHA-215ENST00000512962 PHF8Q9UPP1 1060 aa18.6■□□□□ 0.57
SDHA-215ENST00000512962 SBNO1A3KN83 1393 aa18.59■□□□□ 0.57
SDHA-215ENST00000512962 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
SDHA-215ENST00000512962 EZH2Q15910 746 aaKnown RBP18.58■□□□□ 0.56
SDHA-215ENST00000512962 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
SDHA-215ENST00000512962 PSEN1P49768 467 aa18.57■□□□□ 0.56
SDHA-215ENST00000512962 LMOD2Q6P5Q4 547 aa18.56■□□□□ 0.56
SDHA-215ENST00000512962 BTG4Q9NY30 223 aa18.56■□□□□ 0.56
SDHA-215ENST00000512962 ARHGEF10O15013 1369 aa18.55■□□□□ 0.56
SDHA-215ENST00000512962 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
SDHA-215ENST00000512962 NBR1Q14596 966 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms