RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 ALG2Q9H553 416 aa9.31□□□□□ -0.92
SFPQ-203ENST00000466213 PPP1R12CQ9BZL4 782 aa9.3□□□□□ -0.92
SFPQ-203ENST00000466213 WASHC4Q2M389 1173 aa9.29□□□□□ -0.92
SFPQ-203ENST00000466213 CFAP99D6REC4 459 aa9.28□□□□□ -0.92
SFPQ-203ENST00000466213 POTEB2H3BUK9 544 aa9.28□□□□□ -0.92
SFPQ-203ENST00000466213 RIMBP2O15034 1052 aa9.28□□□□□ -0.92
SFPQ-203ENST00000466213 PTPRGP23470 1445 aa9.28□□□□□ -0.92
SFPQ-203ENST00000466213 CEP162Q5TB80 1403 aa9.28□□□□□ -0.92
SFPQ-203ENST00000466213 UCN2Q96RP3 112 aa9.27□□□□□ -0.93
SFPQ-203ENST00000466213 CLASP1Q7Z460 1538 aa9.27□□□□□ -0.93
SFPQ-203ENST00000466213 CTTNBP2Q8WZ74 1663 aa9.26□□□□□ -0.93
SFPQ-203ENST00000466213 UGGT2Q9NYU1 1516 aa9.26□□□□□ -0.93
SFPQ-203ENST00000466213 PALM3A6NDB9 673 aaPredicted RBP9.26□□□□□ -0.93
SFPQ-203ENST00000466213 SWT1Q5T5J6 900 aaKnown RBP9.26□□□□□ -0.93
SFPQ-203ENST00000466213 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
SFPQ-203ENST00000466213 CYB5RLQ6IPT4 315 aa9.26□□□□□ -0.93
SFPQ-203ENST00000466213 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
SFPQ-203ENST00000466213 KIAA1468Q9P260 1216 aa9.26□□□□□ -0.93
SFPQ-203ENST00000466213 PSDA5PKW4 1024 aaPredicted RBP9.25□□□□□ -0.93
SFPQ-203ENST00000466213 MTMR2Q13614 643 aa9.25□□□□□ -0.93
SFPQ-203ENST00000466213 PRR7Q8TB68 274 aa9.25□□□□□ -0.93
SFPQ-203ENST00000466213 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
SFPQ-203ENST00000466213 EFCAB5A4FU69 1503 aa9.25□□□□□ -0.93
SFPQ-203ENST00000466213 PDE4CQ08493 712 aa9.24□□□□□ -0.93
SFPQ-203ENST00000466213 USTQ9Y2C2 406 aa9.24□□□□□ -0.93
SFPQ-203ENST00000466213 FMN1Q68DA7 1419 aa9.24□□□□□ -0.93
SFPQ-203ENST00000466213 BRD1O95696 1058 aa9.23□□□□□ -0.93
SFPQ-203ENST00000466213 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
SFPQ-203ENST00000466213 ZBED2Q9BTP6 218 aa9.23□□□□□ -0.93
SFPQ-203ENST00000466213 TFIP11Q9UBB9 837 aaKnown RBP9.23□□□□□ -0.93
SFPQ-203ENST00000466213 LMOD1P29536 600 aaPredicted RBP9.22□□□□□ -0.93
SFPQ-203ENST00000466213 CDCA8Q53HL2 280 aa9.22□□□□□ -0.93
SFPQ-203ENST00000466213 KCNK17Q96T54 332 aa9.22□□□□□ -0.93
SFPQ-203ENST00000466213 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
SFPQ-203ENST00000466213 KCNA1Q09470 495 aa9.22□□□□□ -0.93
SFPQ-203ENST00000466213 TSC1Q92574 1164 aa9.22□□□□□ -0.93
SFPQ-203ENST00000466213 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.93
SFPQ-203ENST00000466213 ARHGEF11O15085 1522 aa9.21□□□□□ -0.94
SFPQ-203ENST00000466213 DISP1Q96F81 1524 aa9.21□□□□□ -0.94
SFPQ-203ENST00000466213 PER1O15534 1290 aaPredicted RBP9.21□□□□□ -0.94
SFPQ-203ENST00000466213 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.94
SFPQ-203ENST00000466213 BRD2P25440 801 aaKnown RBP9.21□□□□□ -0.94
SFPQ-203ENST00000466213 HELBQ8NG08 1087 aaPredicted RBP9.21□□□□□ -0.94
SFPQ-203ENST00000466213 TMEM88BA6NKF7 163 aa9.2□□□□□ -0.94
SFPQ-203ENST00000466213 FUT2Q10981 343 aa9.2□□□□□ -0.94
SFPQ-203ENST00000466213 NR6A1Q15406 480 aa9.2□□□□□ -0.94
SFPQ-203ENST00000466213 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
SFPQ-203ENST00000466213 KIAA0556O60303 1618 aa9.2□□□□□ -0.94
SFPQ-203ENST00000466213 SHROOM2Q13796 1616 aa9.2□□□□□ -0.94
SFPQ-203ENST00000466213 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
SFPQ-203ENST00000466213 HOXB1P14653 301 aaPredicted RBP9.19□□□□□ -0.94
SFPQ-203ENST00000466213 SEPT9Q9UHD8 586 aaPredicted RBP9.19□□□□□ -0.94
SFPQ-203ENST00000466213 UACAQ9BZF9 1416 aa9.18□□□□□ -0.94
SFPQ-203ENST00000466213 PSEN2P49810 448 aa9.18□□□□□ -0.94
SFPQ-203ENST00000466213 TBC1D9Q6ZT07 1266 aa9.18□□□□□ -0.94
SFPQ-203ENST00000466213 PLEKHD1A6NEE1 506 aa9.17□□□□□ -0.94
SFPQ-203ENST00000466213 ATG7O95352 703 aa9.17□□□□□ -0.94
SFPQ-203ENST00000466213 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
SFPQ-203ENST00000466213 MAFBQ9Y5Q3 323 aaPredicted RBP9.17□□□□□ -0.94
SFPQ-203ENST00000466213 SAMD9Q5K651 1589 aa9.17□□□□□ -0.94
SFPQ-203ENST00000466213 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
SFPQ-203ENST00000466213 RBM25P49756 843 aaKnown RBP9.16□□□□□ -0.94
SFPQ-203ENST00000466213 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
SFPQ-203ENST00000466213 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
SFPQ-203ENST00000466213 VPS8Q8N3P4 1428 aa9.16□□□□□ -0.94
SFPQ-203ENST00000466213 PATL2C9JE40 543 aaKnown RBP9.15□□□□□ -0.94
SFPQ-203ENST00000466213 IVNS1ABPQ9Y6Y0 642 aa9.15□□□□□ -0.94
SFPQ-203ENST00000466213 ERCC6L2Q5T890 1561 aa9.15□□□□□ -0.94
SFPQ-203ENST00000466213 RIMBP3CA6NJZ7 1639 aa9.15□□□□□ -0.95
SFPQ-203ENST00000466213 RIMBP3BA6NNM3 1639 aa9.15□□□□□ -0.95
SFPQ-203ENST00000466213 RIMBP3Q9UFD9 1639 aa9.15□□□□□ -0.95
SFPQ-203ENST00000466213 SOX11P35716 441 aa9.14□□□□□ -0.95
SFPQ-203ENST00000466213 UBE2Q2Q8WVN8 375 aa9.14□□□□□ -0.95
SFPQ-203ENST00000466213 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
SFPQ-203ENST00000466213 E9PSI1 815 aa9.14□□□□□ -0.95
SFPQ-203ENST00000466213 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
SFPQ-203ENST00000466213 POTEMA6NI47 508 aa9.13□□□□□ -0.95
SFPQ-203ENST00000466213 CFHP08603 1231 aa9.13□□□□□ -0.95
SFPQ-203ENST00000466213 ATP6V1AP38606 617 aa9.13□□□□□ -0.95
SFPQ-203ENST00000466213 KANK4Q5T7N3 995 aaPredicted RBP9.13□□□□□ -0.95
SFPQ-203ENST00000466213 PLB1Q6P1J6 1458 aa9.13□□□□□ -0.95
SFPQ-203ENST00000466213 SEMA3FQ13275 785 aa9.12□□□□□ -0.95
SFPQ-203ENST00000466213 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
SFPQ-203ENST00000466213 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
SFPQ-203ENST00000466213 UHRF1BP1LA0JNW5 1464 aa9.11□□□□□ -0.95
SFPQ-203ENST00000466213 FYCO1Q9BQS8 1478 aa9.11□□□□□ -0.95
SFPQ-203ENST00000466213 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
SFPQ-203ENST00000466213 ATP9BO43861 1147 aa9.11□□□□□ -0.95
SFPQ-203ENST00000466213 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
SFPQ-203ENST00000466213 MTUS2Q5JR59 1369 aa9.1□□□□□ -0.95
SFPQ-203ENST00000466213 FAM98CQ17RN3 349 aaKnown RBP9.1□□□□□ -0.95
SFPQ-203ENST00000466213 GRIPAP1Q4V328 841 aa9.1□□□□□ -0.95
SFPQ-203ENST00000466213 SLC4A5Q9BY07 1137 aa9.1□□□□□ -0.95
SFPQ-203ENST00000466213 ABCC2Q92887 1545 aa9.1□□□□□ -0.95
SFPQ-203ENST00000466213 CCDC18Q5T9S5 1454 aa9.1□□□□□ -0.95
SFPQ-203ENST00000466213 HECW1Q76N89 1606 aa9.09□□□□□ -0.95
SFPQ-203ENST00000466213 RAPGEF6Q8TEU7 1601 aa9.09□□□□□ -0.95
SFPQ-203ENST00000466213 MORN1Q5T089 497 aa9.09□□□□□ -0.95
SFPQ-203ENST00000466213 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
SFPQ-203ENST00000466213 FBXO45P0C2W1 286 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms