RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 LMTK2Q8IWU2 1503 aa14.84□□□□□ -0.03
PDZRN3-203ENST00000462146 GGT6Q6P531 493 aa14.83□□□□□ -0.03
PDZRN3-203ENST00000462146 GGNBP2Q9H3C7 697 aa14.83□□□□□ -0.03
PDZRN3-203ENST00000462146 CAMSAP1Q5T5Y3 1602 aa14.83□□□□□ -0.03
PDZRN3-203ENST00000462146 TMPOP42166 694 aaKnown RBP14.83□□□□□ -0.04
PDZRN3-203ENST00000462146 CHMP5Q9NZZ3 219 aa14.83□□□□□ -0.04
PDZRN3-203ENST00000462146 TRAK2O60296 914 aa14.82□□□□□ -0.04
PDZRN3-203ENST00000462146 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
PDZRN3-203ENST00000462146 ATF7IPQ6VMQ6 1270 aa14.82□□□□□ -0.04
PDZRN3-203ENST00000462146 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
PDZRN3-203ENST00000462146 SIGLEC1Q9BZZ2 1709 aa14.82□□□□□ -0.04
PDZRN3-203ENST00000462146 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
PDZRN3-203ENST00000462146 A0A1W2PP64 1363 aa14.81□□□□□ -0.04
PDZRN3-203ENST00000462146 DDX19BQ9UMR2 479 aa14.81□□□□□ -0.04
PDZRN3-203ENST00000462146 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
PDZRN3-203ENST00000462146 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
PDZRN3-203ENST00000462146 LNPKQ9C0E8 428 aa14.8□□□□□ -0.04
PDZRN3-203ENST00000462146 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
PDZRN3-203ENST00000462146 HSCBQ8IWL3 235 aa14.79□□□□□ -0.04
PDZRN3-203ENST00000462146 NSD2O96028 1365 aa14.79□□□□□ -0.04
PDZRN3-203ENST00000462146 ZBTB40Q9NUA8 1239 aa14.79□□□□□ -0.04
PDZRN3-203ENST00000462146 CT47B1P0C2W7 299 aaPredicted RBP14.78□□□□□ -0.04
PDZRN3-203ENST00000462146 RIPK4P57078 832 aa14.78□□□□□ -0.04
PDZRN3-203ENST00000462146 STK26Q9P289 416 aa14.78□□□□□ -0.04
PDZRN3-203ENST00000462146 UBE2Q2Q8WVN8 375 aa14.77□□□□□ -0.04
PDZRN3-203ENST00000462146 NCOA3Q9Y6Q9 1424 aa14.77□□□□□ -0.05
PDZRN3-203ENST00000462146 ABCC11Q96J66 1382 aa14.77□□□□□ -0.05
PDZRN3-203ENST00000462146 HECW2Q9P2P5 1572 aa14.77□□□□□ -0.05
PDZRN3-203ENST00000462146 NEXMIFQ5QGS0 1516 aa14.77□□□□□ -0.05
PDZRN3-203ENST00000462146 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 DDIT3P35638 169 aa14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 SRPK2P78362 688 aaKnown RBP14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 FOXD4L1Q9NU39 408 aa14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 ANKRD26Q9UPS8 1709 aa14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 NUCB1Q02818 461 aa14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 C1orf115Q9H7X2 142 aa14.76□□□□□ -0.05
PDZRN3-203ENST00000462146 MYO5BQ9ULV0 1848 aa14.75□□□□□ -0.05
PDZRN3-203ENST00000462146 CD2BP2O95400 341 aaKnown RBP14.75□□□□□ -0.05
PDZRN3-203ENST00000462146 AK9Q5TCS8 1911 aa14.75□□□□□ -0.05
PDZRN3-203ENST00000462146 FBLN1P23142 703 aa14.75□□□□□ -0.05
PDZRN3-203ENST00000462146 ABCC3O15438 1527 aa14.75□□□□□ -0.05
PDZRN3-203ENST00000462146 CFAP74Q9C0B2 1584 aa14.74□□□□□ -0.05
PDZRN3-203ENST00000462146 RBM25P49756 843 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-203ENST00000462146 TNPO1Q92973 898 aaKnown RBP14.74□□□□□ -0.05
PDZRN3-203ENST00000462146 DIP2BQ9P265 1576 aa14.74□□□□□ -0.05
PDZRN3-203ENST00000462146 FYB1O15117 783 aa14.74□□□□□ -0.05
PDZRN3-203ENST00000462146 CHD1LQ86WJ1 897 aa14.73□□□□□ -0.05
PDZRN3-203ENST00000462146 GRPEL1Q9HAV7 217 aa14.73□□□□□ -0.05
PDZRN3-203ENST00000462146 RPGRIP1LQ68CZ1 1315 aa14.73□□□□□ -0.05
PDZRN3-203ENST00000462146 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
PDZRN3-203ENST00000462146 KIF2CQ99661 725 aa14.73□□□□□ -0.05
PDZRN3-203ENST00000462146 PIK3C2BO00750 1634 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 CD163L1Q9NR16 1453 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 DDX11L8A8MPP1 907 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 MRE11P49959 708 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 GAS2L3Q86XJ1 694 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 NAP1L5Q96NT1 182 aaPredicted RBP14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 RBM42Q9BTD8 480 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 KIF16BQ96L93 1317 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 THUMPD2Q9BTF0 503 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 PPIP5K1Q6PFW1 1433 aa14.72□□□□□ -0.05
PDZRN3-203ENST00000462146 ERBB4Q15303 1308 aa14.71□□□□□ -0.05
PDZRN3-203ENST00000462146 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
PDZRN3-203ENST00000462146 IL16Q14005 1332 aa14.71□□□□□ -0.05
PDZRN3-203ENST00000462146 ANKRD45Q5TZF3 282 aa14.71□□□□□ -0.06
PDZRN3-203ENST00000462146 PUS7Q96PZ0 661 aaKnown RBP14.71□□□□□ -0.06
PDZRN3-203ENST00000462146 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
PDZRN3-203ENST00000462146 CLCN1P35523 988 aa14.7□□□□□ -0.06
PDZRN3-203ENST00000462146 SNX21Q969T3 373 aa14.7□□□□□ -0.06
PDZRN3-203ENST00000462146 KIF13AQ9H1H9 1805 aa14.7□□□□□ -0.06
PDZRN3-203ENST00000462146 VGFO15240 615 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-203ENST00000462146 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
PDZRN3-203ENST00000462146 KIF20BQ96Q89 1820 aa14.69□□□□□ -0.06
PDZRN3-203ENST00000462146 IPO8O15397 1037 aaKnown RBP14.69□□□□□ -0.06
PDZRN3-203ENST00000462146 POGZQ7Z3K3 1410 aa14.69□□□□□ -0.06
PDZRN3-203ENST00000462146 MED14O60244 1454 aa14.69□□□□□ -0.06
PDZRN3-203ENST00000462146 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
PDZRN3-203ENST00000462146 ELL2O00472 640 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-203ENST00000462146 RAB3GAP1Q15042 981 aa14.68□□□□□ -0.06
PDZRN3-203ENST00000462146 PRKAR2BP31323 418 aa14.68□□□□□ -0.06
PDZRN3-203ENST00000462146 BMP2KLQ5H9B9 411 aa14.68□□□□□ -0.06
PDZRN3-203ENST00000462146 PTPRMP28827 1452 aa14.68□□□□□ -0.06
PDZRN3-203ENST00000462146 ZBTB7BO15156 539 aaPredicted RBP14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 IDI1Q13907 227 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 PRAM1Q96QH2 718 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 HMOX1P09601 288 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 ALDH1L2Q3SY69 923 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 SIRT2Q8IXJ6 389 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 PHACTR3Q96KR7 559 aa14.67□□□□□ -0.06
PDZRN3-203ENST00000462146 MAP2P11137 1827 aaKnown RBP14.66□□□□□ -0.06
PDZRN3-203ENST00000462146 FAM69CQ0P6D2 419 aa14.66□□□□□ -0.06
PDZRN3-203ENST00000462146 HSP90AA1P07900 732 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 SSFA2P28290 1259 aa14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 GAS2L2Q8NHY3 880 aa14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 TERF2IPQ9NYB0 399 aa14.65□□□□□ -0.06
PDZRN3-203ENST00000462146 MLH3Q9UHC1 1453 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms