RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-205ENST00000445329 POLD1P28340 1107 aa8.38□□□□□ -1.07
TRIM6-205ENST00000445329 GABPB1Q06547 395 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-205ENST00000445329 ICE2Q659A1 982 aa8.38□□□□□ -1.07
TRIM6-205ENST00000445329 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
TRIM6-205ENST00000445329 ISY1Q9ULR0 285 aaKnown RBP8.38□□□□□ -1.07
TRIM6-205ENST00000445329 PPRC1Q5VV67 1664 aaKnown RBP8.38□□□□□ -1.07
TRIM6-205ENST00000445329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRIM6-205ENST00000445329 TRAK2O60296 914 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 RINLQ6ZS11 566 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 FAM212AQ96EL1 285 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 HIRIP3Q9BW71 556 aaPredicted RBP8.37□□□□□ -1.07
TRIM6-205ENST00000445329 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 NOL10Q9BSC4 688 aaKnown RBP8.37□□□□□ -1.07
TRIM6-205ENST00000445329 FANCAO15360 1455 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 MBD5Q9P267 1494 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 ABCC5O15440 1437 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 U2AF2P26368 475 aaKnown RBP eCLIP8.37□□□□□ -1.07
TRIM6-205ENST00000445329 LRCH2Q5VUJ6 765 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 SLC26A8Q96RN1 970 aa8.37□□□□□ -1.07
TRIM6-205ENST00000445329 ARAP3Q8WWN8 1544 aa8.36□□□□□ -1.07
TRIM6-205ENST00000445329 SYCP2Q9BX26 1530 aa8.36□□□□□ -1.07
TRIM6-205ENST00000445329 CTR9Q6PD62 1173 aa8.36□□□□□ -1.07
TRIM6-205ENST00000445329 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
TRIM6-205ENST00000445329 SUFUQ9UMX1 484 aa8.36□□□□□ -1.07
TRIM6-205ENST00000445329 RBM25P49756 843 aaKnown RBP8.36□□□□□ -1.07
TRIM6-205ENST00000445329 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
TRIM6-205ENST00000445329 DNMT1P26358 1616 aaKnown RBP8.36□□□□□ -1.07
TRIM6-205ENST00000445329 SLFN14P0C7P3 912 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 GUCY2CP25092 1073 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 SKAP1Q86WV1 359 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 DAPK1P53355 1430 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 ABCC1P33527 1531 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 MCM4P33991 863 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 BRMS1Q9HCU9 246 aa8.35□□□□□ -1.07
TRIM6-205ENST00000445329 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
TRIM6-205ENST00000445329 KIF1CO43896 1103 aaKnown RBP8.34□□□□□ -1.07
TRIM6-205ENST00000445329 FAM177A1Q8N128 213 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-205ENST00000445329 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 PPP1R9BQ96SB3 815 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 TRAPPC8Q9Y2L5 1435 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 NINLQ9Y2I6 1382 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 FAM177BA6PVY3 158 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
TRIM6-205ENST00000445329 TNPO1Q92973 898 aaKnown RBP8.34□□□□□ -1.07
TRIM6-205ENST00000445329 ITFG2Q969R8 447 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 RASSF4Q9H2L5 321 aa8.34□□□□□ -1.07
TRIM6-205ENST00000445329 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.08
TRIM6-205ENST00000445329 HSP90AB4PQ58FF6 505 aa8.34□□□□□ -1.08
TRIM6-205ENST00000445329 AFAP1Q8N556 730 aa8.34□□□□□ -1.08
TRIM6-205ENST00000445329 SPINK5Q9NQ38 1064 aaPredicted RBP8.34□□□□□ -1.08
TRIM6-205ENST00000445329 CROCC2H7BZ55 1655 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 CCDC189A1A4V9 331 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 KIAA1107Q9UPP5 1409 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 ADGRL1O94910 1474 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 RBM5P52756 815 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRIM6-205ENST00000445329 PPP2R5AQ15172 486 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 TSHZ1Q6ZSZ6 1077 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 CXorf56Q9H5V9 222 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 ARHGEF5Q12774 1597 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 RNF123Q5XPI4 1314 aa8.33□□□□□ -1.08
TRIM6-205ENST00000445329 SCAPERQ9BY12 1400 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 RAD51AP2Q09MP3 1159 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 MTA1Q13330 715 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 MNS1Q8NEH6 495 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 PNISRQ8TF01 805 aaKnown RBP8.32□□□□□ -1.08
TRIM6-205ENST00000445329 RRP7BPQ9NSQ0 103 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 NOL7Q9UMY1 257 aaKnown RBP8.32□□□□□ -1.08
TRIM6-205ENST00000445329 CALRP27797 417 aaKnown RBP8.32□□□□□ -1.08
TRIM6-205ENST00000445329 NASPP49321 788 aaPredicted RBP8.32□□□□□ -1.08
TRIM6-205ENST00000445329 GYS2P54840 703 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 CCT2P78371 535 aaKnown RBP8.32□□□□□ -1.08
TRIM6-205ENST00000445329 ZC3H12AQ5D1E8 599 aaKnown RBP8.32□□□□□ -1.08
TRIM6-205ENST00000445329 GAS2L3Q86XJ1 694 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 DRC1Q96MC2 740 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 OGFRQ9NZT2 677 aa8.32□□□□□ -1.08
TRIM6-205ENST00000445329 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 KDM2AQ9Y2K7 1162 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 PPP1R12AO14974 1030 aaPredicted RBP8.31□□□□□ -1.08
TRIM6-205ENST00000445329 RAPGEF3O95398 923 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 FEZ1Q99689 392 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 MED4Q9NPJ6 270 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 SMG6Q86US8 1419 aaKnown RBP8.31□□□□□ -1.08
TRIM6-205ENST00000445329 CCDC141Q6ZP82 1450 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 PLEKHH2Q8IVE3 1493 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 NEO1Q92859 1461 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 CFAP74Q9C0B2 1584 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 ANKRD23Q86SG2 305 aa8.31□□□□□ -1.08
TRIM6-205ENST00000445329 CCDC97Q96F63 343 aaPredicted RBP8.31□□□□□ -1.08
TRIM6-205ENST00000445329 COL17A1Q9UMD9 1497 aaPredicted RBP8.3□□□□□ -1.08
TRIM6-205ENST00000445329 C9orf84Q5VXU9 1444 aa8.3□□□□□ -1.08
TRIM6-205ENST00000445329 SART3Q15020 963 aaKnown RBP8.3□□□□□ -1.08
TRIM6-205ENST00000445329 TERF2Q15554 542 aa8.3□□□□□ -1.08
TRIM6-205ENST00000445329 NUDCQ9Y266 331 aa8.3□□□□□ -1.08
TRIM6-205ENST00000445329 KDM6BO15054 1643 aa8.3□□□□□ -1.08
TRIM6-205ENST00000445329 PAIP2Q9BPZ3 127 aaKnown RBP8.3□□□□□ -1.08
TRIM6-205ENST00000445329 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
TRIM6-205ENST00000445329 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
TRIM6-205ENST00000445329 BCL2L12Q9HB09 334 aa8.29□□□□□ -1.08
TRIM6-205ENST00000445329 RPS6KL1Q9Y6S9 549 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms