RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	NISCH	Q9Y2I1	1504 aa		12.92	□□□□□ -0.34
TRIM6-205	ENST00000445329	PELP1	Q8IZL8	1130 aa	Known RBP	12.42	□□□□□ -0.42
TRIM6-205	ENST00000445329	MYT1	Q01538	1121 aa		12.25	□□□□□ -0.45
TRIM6-205	ENST00000445329	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.79	□□□□□ -0.52
TRIM6-205	ENST00000445329	PRKCSH	P14314	528 aa	Predicted RBP	11.75	□□□□□ -0.53
TRIM6-205	ENST00000445329	SLC24A1	O60721	1099 aa		11.52	□□□□□ -0.57
TRIM6-205	ENST00000445329	ERICH6	Q7L0X2	663 aa		11.42	□□□□□ -0.58
TRIM6-205	ENST00000445329	APLP2	Q06481	763 aa		11.37	□□□□□ -0.59
TRIM6-205	ENST00000445329	BCL11A	Q9H165	835 aa		11.35	□□□□□ -0.59
TRIM6-205	ENST00000445329	CCDC180	Q9P1Z9	1646 aa		11.32	□□□□□ -0.6
TRIM6-205	ENST00000445329	HRC	P23327	699 aa		11.29	□□□□□ -0.6
TRIM6-205	ENST00000445329	SCAF1	Q9H7N4	1312 aa	Known RBP	11.26	□□□□□ -0.61
TRIM6-205	ENST00000445329	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.21	□□□□□ -0.61
TRIM6-205	ENST00000445329	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.06	□□□□□ -0.64
TRIM6-205	ENST00000445329	DAXX	Q9UER7	740 aa	Predicted RBP	10.95	□□□□□ -0.66
TRIM6-205	ENST00000445329	ABCC9	O60706	1549 aa		10.91	□□□□□ -0.66
TRIM6-205	ENST00000445329	CENPB	P07199	599 aa	Predicted RBP	10.89	□□□□□ -0.67
TRIM6-205	ENST00000445329	EIF5B	O60841	1220 aa	Known RBP	10.82	□□□□□ -0.68
TRIM6-205	ENST00000445329	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.81	□□□□□ -0.68
TRIM6-205	ENST00000445329	DCAF8L2	P0C7V8	631 aa		10.75	□□□□□ -0.69
TRIM6-205	ENST00000445329	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.69	□□□□□ -0.7
TRIM6-205	ENST00000445329	ACIN1	Q9UKV3	1341 aa	Known RBP	10.67	□□□□□ -0.7
TRIM6-205	ENST00000445329	PLEKHG5	O94827	1062 aa		10.66	□□□□□ -0.7
TRIM6-205	ENST00000445329	GTF3C3	Q9Y5Q9	886 aa		10.66	□□□□□ -0.7
TRIM6-205	ENST00000445329	DCAF1	Q9Y4B6	1507 aa		10.65	□□□□□ -0.71
TRIM6-205	ENST00000445329	ANP32E	Q9BTT0	268 aa		10.64	□□□□□ -0.71
TRIM6-205	ENST00000445329	PCGF6	Q9BYE7	350 aa		10.61	□□□□□ -0.71
TRIM6-205	ENST00000445329	NEUROD1	Q13562	356 aa		10.59	□□□□□ -0.71
TRIM6-205	ENST00000445329	NACAD	O15069	1562 aa		10.58	□□□□□ -0.72
TRIM6-205	ENST00000445329	CSRNP3	Q8WYN3	585 aa		10.58	□□□□□ -0.72
TRIM6-205	ENST00000445329	MYO15B	Q96JP2	1530 aa		10.57	□□□□□ -0.72
TRIM6-205	ENST00000445329	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.54	□□□□□ -0.72
TRIM6-205	ENST00000445329	RB1CC1	Q8TDY2	1594 aa		10.53	□□□□□ -0.72
TRIM6-205	ENST00000445329	UBE2Q2	Q8WVN8	375 aa		10.49	□□□□□ -0.73
TRIM6-205	ENST00000445329	SHROOM4	Q9ULL8	1493 aa		10.47	□□□□□ -0.73
TRIM6-205	ENST00000445329	PODXL2	Q9NZ53	605 aa		10.44	□□□□□ -0.74
TRIM6-205	ENST00000445329	SCRIB	Q14160	1630 aa		10.43	□□□□□ -0.74
TRIM6-205	ENST00000445329	UNC13A	Q9UPW8	1703 aa		10.39	□□□□□ -0.75
TRIM6-205	ENST00000445329	CHIC1	Q5VXU3	224 aa		10.38	□□□□□ -0.75
TRIM6-205	ENST00000445329	ZEB1	P37275	1124 aa	Predicted RBP	10.33	□□□□□ -0.76
TRIM6-205	ENST00000445329	PKNOX2	Q96KN3	472 aa		10.33	□□□□□ -0.76
TRIM6-205	ENST00000445329	CCDC136	Q96JN2	1154 aa		10.29	□□□□□ -0.76
TRIM6-205	ENST00000445329	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.28	□□□□□ -0.76
TRIM6-205	ENST00000445329	BICRA	Q9NZM4	1560 aa		10.27	□□□□□ -0.76
TRIM6-205	ENST00000445329	SALL2	Q9Y467	1007 aa	Predicted RBP	10.27	□□□□□ -0.77
TRIM6-205	ENST00000445329	KLHL34	Q8N239	644 aa		10.13	□□□□□ -0.79
TRIM6-205	ENST00000445329	NCBP3	Q53F19	620 aa	Known RBP	10.11	□□□□□ -0.79
TRIM6-205	ENST00000445329	TSHZ2	Q9NRE2	1034 aa		10.11	□□□□□ -0.79
TRIM6-205	ENST00000445329	CECR2	Q9BXF3	1484 aa		10.1	□□□□□ -0.79
TRIM6-205	ENST00000445329	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.09	□□□□□ -0.79
TRIM6-205	ENST00000445329	NEFL	P07196	543 aa		10.05	□□□□□ -0.8
TRIM6-205	ENST00000445329	PDE4C	Q08493	712 aa		10.03	□□□□□ -0.8
TRIM6-205	ENST00000445329	ERICH6B	Q5W0A0	696 aa		10.03	□□□□□ -0.8
TRIM6-205	ENST00000445329	PDIA4	P13667	645 aa	Known RBP	10.02	□□□□□ -0.8
TRIM6-205	ENST00000445329	RANGAP1	P46060	587 aa	Predicted RBP	10.02	□□□□□ -0.8
TRIM6-205	ENST00000445329	MROH2B	Q7Z745	1585 aa		10	□□□□□ -0.81
TRIM6-205	ENST00000445329	YTHDC1	Q96MU7	727 aa	Known RBP	9.99	□□□□□ -0.81
TRIM6-205	ENST00000445329	SMARCA4	P51532	1647 aa		9.97	□□□□□ -0.81
TRIM6-205	ENST00000445329	RSF1	Q96T23	1441 aa	Predicted RBP	9.97	□□□□□ -0.81
TRIM6-205	ENST00000445329	SUPT5H	O00267	1087 aa	Known RBP	9.96	□□□□□ -0.81
TRIM6-205	ENST00000445329	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	9.96	□□□□□ -0.81
TRIM6-205	ENST00000445329	DEK	P35659	375 aa	Known RBP	9.96	□□□□□ -0.82
TRIM6-205	ENST00000445329	DIEXF	Q68CQ4	756 aa	Known RBP	9.96	□□□□□ -0.82
TRIM6-205	ENST00000445329	EIF4G1	Q04637	1599 aa	Known RBP	9.95	□□□□□ -0.82
TRIM6-205	ENST00000445329		A0A0U1RQG5	324 aa	Predicted RBP	9.95	□□□□□ -0.82
TRIM6-205	ENST00000445329	TRIM26	Q12899	539 aa	Predicted RBP	9.95	□□□□□ -0.82
TRIM6-205	ENST00000445329	ARX	Q96QS3	562 aa		9.92	□□□□□ -0.82
TRIM6-205	ENST00000445329	WIZ	O95785	1651 aa		9.92	□□□□□ -0.82
TRIM6-205	ENST00000445329	BCL11B	Q9C0K0	894 aa	Predicted RBP	9.9	□□□□□ -0.82
TRIM6-205	ENST00000445329	MYT1L	Q9UL68	1186 aa		9.9	□□□□□ -0.82
TRIM6-205	ENST00000445329	TIMELESS	Q9UNS1	1208 aa		9.9	□□□□□ -0.82
TRIM6-205	ENST00000445329	PLPPR3	Q6T4P5	718 aa		9.89	□□□□□ -0.83
TRIM6-205	ENST00000445329	FGD1	P98174	961 aa		9.88	□□□□□ -0.83
TRIM6-205	ENST00000445329	SUPT16H	Q9Y5B9	1047 aa	Known RBP	9.88	□□□□□ -0.83
TRIM6-205	ENST00000445329	CC2D2A	Q9P2K1	1620 aa		9.86	□□□□□ -0.83
TRIM6-205	ENST00000445329	RTN4	Q9NQC3	1192 aa	Known RBP	9.86	□□□□□ -0.83
TRIM6-205	ENST00000445329	ATAD2B	Q9ULI0	1458 aa		9.85	□□□□□ -0.83
TRIM6-205	ENST00000445329	PEG3	Q9GZU2	1588 aa		9.84	□□□□□ -0.83
TRIM6-205	ENST00000445329	POTED	Q86YR6	584 aa		9.84	□□□□□ -0.83
TRIM6-205	ENST00000445329	DNAJC5B	Q9UF47	199 aa		9.84	□□□□□ -0.83
TRIM6-205	ENST00000445329	ZMYND15	Q9H091	742 aa		9.82	□□□□□ -0.84
TRIM6-205	ENST00000445329	CLSPN	Q9HAW4	1339 aa		9.82	□□□□□ -0.84
TRIM6-205	ENST00000445329	SMARCA2	P51531	1590 aa		9.8	□□□□□ -0.84
TRIM6-205	ENST00000445329	GLIPR1L2	Q4G1C9	344 aa		9.79	□□□□□ -0.84
TRIM6-205	ENST00000445329	IL27	Q8NEV9	243 aa		9.79	□□□□□ -0.84
TRIM6-205	ENST00000445329	MSH5	O43196	834 aa		9.78	□□□□□ -0.84
TRIM6-205	ENST00000445329	AAMP	Q13685	434 aa		9.78	□□□□□ -0.84
TRIM6-205	ENST00000445329	NCAPD3	P42695	1498 aa		9.78	□□□□□ -0.84
TRIM6-205	ENST00000445329	RBM19	Q9Y4C8	960 aa	Known RBP	9.78	□□□□□ -0.84
TRIM6-205	ENST00000445329	TOP2A	P11388	1531 aa	Known RBP	9.77	□□□□□ -0.85
TRIM6-205	ENST00000445329	RBM10	P98175	930 aa	Known RBP	9.77	□□□□□ -0.85
TRIM6-205	ENST00000445329	VSIG10	Q8N0Z9	540 aa		9.77	□□□□□ -0.85
TRIM6-205	ENST00000445329	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.77	□□□□□ -0.85
TRIM6-205	ENST00000445329	TAF7L	Q5H9L4	462 aa		9.75	□□□□□ -0.85
TRIM6-205	ENST00000445329	HMGXB3	Q12766	1538 aa		9.74	□□□□□ -0.85
TRIM6-205	ENST00000445329	TULP1	O00294	542 aa	Predicted RBP	9.7	□□□□□ -0.86
TRIM6-205	ENST00000445329	CCDC88B	A6NC98	1476 aa		9.69	□□□□□ -0.86
TRIM6-205	ENST00000445329	DHX37	Q8IY37	1157 aa	Known RBP	9.67	□□□□□ -0.86
TRIM6-205	ENST00000445329	EHMT2	Q96KQ7	1210 aa		9.66	□□□□□ -0.86
TRIM6-205	ENST00000445329	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	9.65	□□□□□ -0.86

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms