RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 CAVIN1Q6NZI2 390 aaKnown RBP3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 LRSAM1Q6UWE0 723 aa3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 ATF7IPQ6VMQ6 1270 aa3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 CHD1LQ86WJ1 897 aa3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 CHMP7Q8WUX9 453 aaPredicted RBP3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 PDLIM2Q96JY6 352 aa3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 KIF3AQ9Y496 699 aa3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 KDM5AP29375 1690 aaKnown RBP3.48□□□□□ -1.85
SNORD88.1-201ENST00000408684 MYOM2P54296 1465 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 RPGRIP1LQ68CZ1 1315 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 ASXL2Q76L83 1435 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 UQCRHLA0A096LP55 91 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 BAG4O95429 457 aaKnown RBP3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 SEC24BO95487 1268 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 TUBB4AP04350 444 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 UQCRHP07919 91 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 GTF2F1P35269 517 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 NBPF1Q3BBV0 1214 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 EFCAB2Q5VUJ9 269 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 ITPRIPQ8IWB1 547 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 TCP11L2Q8N4U5 519 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 MYRIPQ8NFW9 859 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 PANK1Q8TE04 598 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 INTS4Q96HW7 963 aaKnown RBP3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 JPH4Q96JJ6 628 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 ZNF692Q9BU19 519 aaPredicted RBP3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 PANK2Q9BZ23 570 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 API5Q9BZZ5 524 aaKnown RBP3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 SMC4Q9NTJ3 1288 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 FAM13BQ9NYF5 915 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 USP25Q9UHP3 1055 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 R3HCC1Q9Y3T6 440 aaKnown RBP3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 PCDHB15Q9Y5E8 787 aa3.47□□□□□ -1.85
SNORD88.1-201ENST00000408684 ABCA8O94911 1581 aa3.46□□□□□ -1.85
SNORD88.1-201ENST00000408684 IQGAP1P46940 1657 aa3.46□□□□□ -1.85
SNORD88.1-201ENST00000408684 PTPRTO14522 1441 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 TRPM2O94759 1503 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 PREX2Q70Z35 1606 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 USP32Q8NFA0 1604 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 HMMRO75330 724 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 CAVIN2O95810 425 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 HNRNPMP52272 730 aaKnown RBP eCLIP3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 ANAPC15P60006 121 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 GABPB1Q06547 395 aaPredicted RBP3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 DMTNQ08495 405 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 RPAP2Q8IXW5 612 aaPredicted RBP3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 ARXQ96QS3 562 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 CHMP4AQ9BY43 222 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 TSPY26PQ9H489 355 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 ZBTB40Q9NUA8 1239 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 PAXBP1Q9Y5B6 917 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 CDC42BPAQ5VT25 1732 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 ATP10BO94823 1461 aa3.46□□□□□ -1.86
SNORD88.1-201ENST00000408684 EVC2Q86UK5 1308 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 MADDQ8WXG6 1647 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 KIF2AO00139 706 aaPredicted RBP3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 HTATSF1O43719 755 aaKnown RBP3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 CDK11BP21127 795 aaKnown RBP3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 ZSCAN23Q3MJ62 389 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 MCTP1Q6DN14 999 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 CCDC146Q8IYE0 955 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 PIBF1Q8WXW3 757 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 CHMP4CQ96CF2 233 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 CGNQ9P2M7 1197 aaKnown RBP3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 PRDM4Q9UKN5 801 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 PLA2R1Q13018 1463 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 IQSEC2Q5JU85 1478 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 ZNF518AQ6AHZ1 1483 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 PLB1Q6P1J6 1458 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 SETBP1Q9Y6X0 1596 aa3.45□□□□□ -1.86
SNORD88.1-201ENST00000408684 WDR33Q9C0J8 1336 aaKnown RBP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 PPIP5K1Q6PFW1 1433 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 TRAPPC8Q9Y2L5 1435 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 ARHGAP5Q13017 1502 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 ARAP3Q8WWN8 1544 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 SHROOM2Q13796 1616 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 FANCAO15360 1455 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 MED14O60244 1454 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 ANKRD36BQ8N2N9 1353 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 VGFO15240 615 aaPredicted RBP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 NRDCO43847 1150 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 NEMFO60524 1076 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 FCHSD2O94868 740 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 CYP2E1P05181 493 aaPredicted RBP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 U2AF1L5P0DN76 240 aaPredicted RBP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 TRIM27P14373 513 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 GNAI1P63096 354 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 U2AF1Q01081 240 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 ANKRD45Q5TZF3 282 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 SPRYD3Q8NCJ5 442 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 SRCIN1Q9C0H9 1055 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 LMBRD1Q9NUN5 540 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 TERF2IPQ9NYB0 399 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 OGFRQ9NZT2 677 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 SPHKAPQ2M3C7 1700 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 MYO3AQ8NEV4 1616 aa3.44□□□□□ -1.86
SNORD88.1-201ENST00000408684 ZFYVE9O95405 1425 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms