RNA–Protein interactions for RNA: ENSMUST00000190665.1

Xrn1-209, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 3,093 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-209ENSMUST00000190665 Q9D9H8 365 aa7.05□□□□□ -1.28
Xrn1-209ENSMUST00000190665 4930567H17RikQ3V0K5 233 aa7.05□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Fnbp4Q6ZQ03 1031 aa7.05□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Slain2Q8CI08 581 aa7.05□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Nwd2Q6P5U7 1742 aa7.05□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Nfat5Q9WV30 1534 aa7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Nup153E9Q3G8 1462 aaKnown RBP7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Tnks1bp1P58871 1720 aa7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Ncoa4Q5U4H9 625 aa7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Card11Q8CIS0 1159 aa7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Ptpn23Q6PB44 1692 aa7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Shank2Q80Z38 1476 aa7.04□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Utp14aQ640M1 767 aaKnown RBP7.03□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Ano8Q6PB70 1060 aa7.03□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Cadps2Q8BYR5 1297 aa7.03□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Uhrf1bp1lA2RSJ4 1457 aa7.02□□□□□ -1.28
Xrn1-209ENSMUST00000190665 Gsto1O09131 240 aa7.02□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Rundc1Q0VDN7 615 aa7.02□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Fan1Q69ZT1 1020 aa7.02□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Gm13695A2AK44 830 aa7.02□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Wdr17E9Q271 1322 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Arfgef2A2A5R2 1792 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Zfp777B9EKF4 885 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Amigo3Q8C2S7 508 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 ZgpatQ8VDM1 511 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Zbtb7cQ8VCZ7 619 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 BccipQ9CWI3 316 aa7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 HnrnpmQ9D0E1 729 aaKnown RBP7.01□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Map2P20357 1828 aa7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Atf3Q60765 181 aa7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Atp2b2Q9R0K7 1198 aa7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Myo5bP21271 1818 aa7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Gimap6Q8K349 305 aa7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Gtf3c5Q8R2T8 520 aa7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 IbtkQ6ZPR6 1352 aaKnown RBP7□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Stag3O70576 1240 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Arid3aQ62431 601 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Map3k19E9Q3S4 1311 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Asxl2Q8BZ32 1370 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Lrp6O88572 1613 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 G430095P16RikE9Q913 147 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Ms4a5Q810P8 197 aa6.99□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Gm10563F6WIE4 79 aa6.98□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Cdk19Q8BWD8 501 aa6.98□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Kif24Q6NWW5 1356 aa6.98□□□□□ -1.29
Xrn1-209ENSMUST00000190665 PappaQ8R4K8 1624 aa6.98□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Rnf216P58283 853 aa6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Farp2Q91VS8 1065 aa6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Ybx3Q9JKB3 361 aaKnown RBP6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Nid2O88322 1403 aa6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Mst1rQ62190 1378 aa6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Slx1bQ8BX32 270 aa6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Las1lA2BE28 776 aaKnown RBP6.97□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Trpm3Q5F4S9 1721 aa6.96□□□□□ -1.29
Xrn1-209ENSMUST00000190665 P3h3Q8CG70 732 aa6.96□□□□□ -1.29
Xrn1-209ENSMUST00000190665 Slit1Q80TR4 1531 aa6.96□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Tom1O88746 492 aa6.96□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Hspa1lP16627 641 aa6.96□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Hmgb2P30681 210 aaKnown RBP6.96□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Ly75Q60767 1723 aa6.96□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Adgrb1Q3UHD1 1582 aa6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 TimelessQ9R1X4 1197 aa6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Eid3Q3V124 375 aa6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Atf7ipQ7TT18 1306 aa6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Tmf1B9EKI3 1091 aa6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Grwd1Q810D6 446 aaKnown RBP6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Ap3b2Q9JME5 1082 aa6.95□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Chd4Q6PDQ2 1915 aaKnown RBP6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Gimap5Q8BWF2 308 aa6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Kcnh5Q920E3 988 aa6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Lrrc59Q922Q8 307 aaKnown RBP6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Kdm2aP59997 1161 aa6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Pip4k2bQ80XI4 416 aa6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Cacna1sQ02789 1880 aa6.94□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Casz1Q9CWL2 1761 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Idi1P58044 227 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Vps33bP59016 617 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Fam184bQ0KK56 942 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Zfyve9A2A8R0 1397 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 PrxO55103 1391 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Pard3Q99NH2 1333 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Fer1l6E0CZ42 1862 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Emilin2Q8K482 1074 aa6.93□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Cntnap1O54991 1385 aa6.92□□□□□ -1.3
Xrn1-209ENSMUST00000190665 TnrQ8BYI9 1358 aa6.92□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Atp1b4Q99ME6 356 aa6.92□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Os9Q8K2C7 672 aa6.92□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Kdm6aO70546 1401 aa6.92□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Frmpd2A0A140LI67 1392 aa6.91□□□□□ -1.3
Xrn1-209ENSMUST00000190665 FancaQ9JL70 1439 aa6.91□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Ttll13A4Q9F6 804 aa6.9□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Slc24a1Q91WD8 1130 aa6.9□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Tnrc6cQ3UHC0 1690 aaKnown RBP6.9□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Mink1Q9JM52 1308 aa6.9□□□□□ -1.3
Xrn1-209ENSMUST00000190665 Evi5lH3BKQ3 813 aa6.9□□□□□ -1.31
Xrn1-209ENSMUST00000190665 HdgfP51859 237 aaKnown RBP6.9□□□□□ -1.31
Xrn1-209ENSMUST00000190665 Trim28Q62318 834 aa6.89□□□□□ -1.31
Xrn1-209ENSMUST00000190665 Stk26Q99JT2 416 aa6.89□□□□□ -1.31
Xrn1-209ENSMUST00000190665 Ric1Q69ZJ7 1422 aa6.89□□□□□ -1.31
Xrn1-209ENSMUST00000190665 Card10P58660 1021 aa6.89□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms