RNA–Protein interactions for RNA: ENSMUST00000190665.1

Xrn1-209, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 3,093 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-209ENSMUST00000190665 Gm35339A0A140LHH9 1649 aa11.97□□□□□ -0.49
Xrn1-209ENSMUST00000190665 NischQ80TM9 1593 aa11.45□□□□□ -0.58
Xrn1-209ENSMUST00000190665 Chic1Q8CBW7 227 aa11.38□□□□□ -0.59
Xrn1-209ENSMUST00000190665 Abcc9P70170 1546 aa11.24□□□□□ -0.61
Xrn1-209ENSMUST00000190665 Abcc8B2RUS7 1588 aa11.13□□□□□ -0.63
Xrn1-209ENSMUST00000190665 ScribQ80U72 1612 aa10.63□□□□□ -0.71
Xrn1-209ENSMUST00000190665 Dcaf1Q80TR8 1506 aa10.59□□□□□ -0.71
Xrn1-209ENSMUST00000190665 Mapk8ip2Q9ERE9 830 aa10.46□□□□□ -0.73
Xrn1-209ENSMUST00000190665 Ccdc180J3QNE4 1664 aa10.4□□□□□ -0.75
Xrn1-209ENSMUST00000190665 NacadQ5SWP3 1504 aa10.39□□□□□ -0.75
Xrn1-209ENSMUST00000190665 Kdm5dQ62240 1548 aa10.26□□□□□ -0.77
Xrn1-209ENSMUST00000190665 Plppr3Q7TPB0 716 aa10.18□□□□□ -0.78
Xrn1-209ENSMUST00000190665 Crybg2B7ZCC2 1516 aa10.16□□□□□ -0.78
Xrn1-209ENSMUST00000190665 Sycp2Q9CUU3 1500 aa10.16□□□□□ -0.78
Xrn1-209ENSMUST00000190665 Phf23Q8BSN5 401 aa10.06□□□□□ -0.8
Xrn1-209ENSMUST00000190665 Rb1cc1Q9ESK9 1588 aa9.98□□□□□ -0.81
Xrn1-209ENSMUST00000190665 Baz1aO88379 1555 aa9.96□□□□□ -0.82
Xrn1-209ENSMUST00000190665 BicraF8VPZ9 1578 aa9.93□□□□□ -0.82
Xrn1-209ENSMUST00000190665 Gab3Q8BSM5 595 aa9.91□□□□□ -0.82
Xrn1-209ENSMUST00000190665 Baz1bQ9Z277 1479 aa9.77□□□□□ -0.85
Xrn1-209ENSMUST00000190665 Smarca2Q6DIC0 1577 aa9.73□□□□□ -0.85
Xrn1-209ENSMUST00000190665 Rtl1Q7M732 1744 aa9.69□□□□□ -0.86
Xrn1-209ENSMUST00000190665 Pds5bQ4VA53 1446 aaKnown RBP9.69□□□□□ -0.86
Xrn1-209ENSMUST00000190665 Thoc2B1AZI6 1594 aaKnown RBP9.64□□□□□ -0.87
Xrn1-209ENSMUST00000190665 Atad2bE9Q166 1460 aaKnown RBP9.62□□□□□ -0.87
Xrn1-209ENSMUST00000190665 Smarca4Q3TKT4 1613 aaKnown RBP9.58□□□□□ -0.88
Xrn1-209ENSMUST00000190665 Fam135aQ6NS59 1506 aa9.48□□□□□ -0.89
Xrn1-209ENSMUST00000190665 Senp3Q9EP97 568 aaKnown RBP9.46□□□□□ -0.89
Xrn1-209ENSMUST00000190665 Iqgap2Q3UQ44 1575 aa9.46□□□□□ -0.9
Xrn1-209ENSMUST00000190665 Kcna4Q61423 654 aa9.44□□□□□ -0.9
Xrn1-209ENSMUST00000190665 Zcchc6Q5BLK4 1491 aaKnown RBP9.42□□□□□ -0.9
Xrn1-209ENSMUST00000190665 Cttnbp2B9EJA2 1648 aa9.42□□□□□ -0.9
Xrn1-209ENSMUST00000190665 Wdr62Q3U3T8 1523 aa9.42□□□□□ -0.9
Xrn1-209ENSMUST00000190665 Ercc6F8VPZ5 1481 aa9.41□□□□□ -0.9
Xrn1-209ENSMUST00000190665 Rhox8Q6VSS7 320 aa9.35□□□□□ -0.91
Xrn1-209ENSMUST00000190665 Brd4Q9ESU6 1400 aaKnown RBP9.33□□□□□ -0.92
Xrn1-209ENSMUST00000190665 Cecr2E9Q2Z1 1453 aa9.32□□□□□ -0.92
Xrn1-209ENSMUST00000190665 Frmpd1A2AKB4 1549 aa9.3□□□□□ -0.92
Xrn1-209ENSMUST00000190665 CftrP26361 1476 aa9.29□□□□□ -0.92
Xrn1-209ENSMUST00000190665 Cc2d2aQ8CFW7 1633 aa9.28□□□□□ -0.92
Xrn1-209ENSMUST00000190665 Unc13aQ4KUS2 1712 aa9.26□□□□□ -0.93
Xrn1-209ENSMUST00000190665 Phldb1Q6PDH0 1371 aaKnown RBP9.25□□□□□ -0.93
Xrn1-209ENSMUST00000190665 Synj1Q8CHC4 1574 aa9.23□□□□□ -0.93
Xrn1-209ENSMUST00000190665 Lamc3Q9R0B6 1581 aa9.14□□□□□ -0.95
Xrn1-209ENSMUST00000190665 TnnQ80Z71 1560 aa9.14□□□□□ -0.95
Xrn1-209ENSMUST00000190665 Top2bQ64511 1612 aa9.13□□□□□ -0.95
Xrn1-209ENSMUST00000190665 Mrc2Q64449 1479 aa9.08□□□□□ -0.96
Xrn1-209ENSMUST00000190665 Gpatch8A2A6A1 1505 aa9.03□□□□□ -0.96
Xrn1-209ENSMUST00000190665 Trim41Q5NCC3 630 aa9□□□□□ -0.97
Xrn1-209ENSMUST00000190665 Golga3P55937 1487 aa9□□□□□ -0.97
Xrn1-209ENSMUST00000190665 Rsf1E9PWW9 1441 aaKnown RBP8.99□□□□□ -0.97
Xrn1-209ENSMUST00000190665 Dnajc5bQ9CQ94 199 aa8.98□□□□□ -0.97
Xrn1-209ENSMUST00000190665 Fmn1Q05860 1466 aa8.95□□□□□ -0.98
Xrn1-209ENSMUST00000190665 Pbrm1Q8BSQ9 1634 aaKnown RBP8.9□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Camsap1A2AHC3 1581 aa8.89□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Eif4g3Q80XI3 1579 aaKnown RBP8.88□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Lrriq1Q0P5X1 1673 aa8.86□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Kif21aQ9QXL2 1672 aa8.85□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Ubl4bQ9CQ84 188 aa8.84□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Ccdc18Q640L5 1455 aa8.84□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Cux2P70298 1426 aa8.84□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Cep164Q5DU05 1446 aa8.84□□□□□ -0.99
Xrn1-209ENSMUST00000190665 Kif15Q6P9L6 1387 aa8.81□□□□□ -1
Xrn1-209ENSMUST00000190665 Top2aQ01320 1528 aaKnown RBP8.81□□□□□ -1
Xrn1-209ENSMUST00000190665 NrkQ9R0G8 1455 aa8.78□□□□□ -1
Xrn1-209ENSMUST00000190665 Crocc2F6XLV1 1638 aa8.77□□□□□ -1.01
Xrn1-209ENSMUST00000190665 Ift140E9PY46 1464 aa8.77□□□□□ -1.01
Xrn1-209ENSMUST00000190665 PogzQ8BZH4 1409 aaKnown RBP8.77□□□□□ -1.01
Xrn1-209ENSMUST00000190665 Grin2bQ01097 1482 aa8.75□□□□□ -1.01
Xrn1-209ENSMUST00000190665 Efcab5A0JP43 1406 aa8.74□□□□□ -1.01
Xrn1-209ENSMUST00000190665 LrpprcQ6PB66 1392 aaKnown RBP8.74□□□□□ -1.01
Xrn1-209ENSMUST00000190665 Ube2uB1AUC4 352 aa8.73□□□□□ -1.01
Xrn1-209ENSMUST00000190665 Shroom2A2ALU4 1481 aa8.72□□□□□ -1.01
Xrn1-209ENSMUST00000190665 Rusc2Q80U22 1514 aa8.71□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Urb2E9Q7L1 1524 aaKnown RBP8.7□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Ccdc136Q3TVA9 1136 aa8.69□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Dhx29Q6PGC1 1365 aaKnown RBP8.67□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Nup160Q9Z0W3 1402 aaKnown RBP8.67□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Esf1Q3V1V3 845 aaKnown RBP8.66□□□□□ -1.02
Xrn1-209ENSMUST00000190665 EprsQ8CGC7 1512 aaKnown RBP8.66□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Shroom4Q1W617 1475 aa8.66□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Duox2A2AQ99 1517 aa8.66□□□□□ -1.02
Xrn1-209ENSMUST00000190665 HrcG5E8J6 738 aa8.65□□□□□ -1.02
Xrn1-209ENSMUST00000190665 AqrQ8CFQ3 1481 aaKnown RBP8.65□□□□□ -1.02
Xrn1-209ENSMUST00000190665 Cc2d2bA0A286YDU8 1405 aa8.65□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Map3k1P53349 1493 aa8.64□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Eif4g1Q6NZJ6 1600 aaKnown RBP8.63□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Plb1Q3TTY0 1478 aa8.61□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Npm1Q61937 292 aaKnown RBP8.61□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Zcchc11B2RX14 1644 aaKnown RBP8.61□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Samd9lQ69Z37 1561 aa8.6□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Disp1Q3TDN0 1521 aa8.6□□□□□ -1.03
Xrn1-209ENSMUST00000190665 SynmQ70IV5 1561 aa8.6□□□□□ -1.03
Xrn1-209ENSMUST00000190665 Adamts12Q811B3 1600 aa8.58□□□□□ -1.04
Xrn1-209ENSMUST00000190665 Setd1bQ8CFT2 1985 aa8.57□□□□□ -1.04
Xrn1-209ENSMUST00000190665 Ccdc88bQ4QRL3 1481 aa8.56□□□□□ -1.04
Xrn1-209ENSMUST00000190665 Magi3Q9EQJ9 1476 aa8.56□□□□□ -1.04
Xrn1-209ENSMUST00000190665 Polr1aO35134 1717 aaKnown RBP8.56□□□□□ -1.04
Xrn1-209ENSMUST00000190665 Dmrt2Q8BG36 561 aa8.56□□□□□ -1.04
Xrn1-209ENSMUST00000190665 Rpap1Q80TE0 1409 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 145.1 ms