RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Znf521Q6KAS7 1311 aa35.97■■■■□ 3.35
Ldb1-208ENSMUST00000185355 EspnQ9ET47 871 aa35.96■■■■□ 3.35
Ldb1-208ENSMUST00000185355 PaskQ8CEE6 1383 aa35.95■■■■□ 3.35
Ldb1-208ENSMUST00000185355 Trim28Q62318 834 aa35.95■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Smc5Q8CG46 1101 aaKnown RBP35.95■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Ccar1Q8CH18 1146 aaKnown RBP35.95■■■■□ 3.34
Ldb1-208ENSMUST00000185355 PtpruB1AUH1 1446 aa35.94■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Dusp27Q148W8 1138 aa35.94■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Ksr2Q3UVC0 959 aa35.93■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Cavin4A2AMM0 362 aa35.92■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Idi2Q8BFZ6 227 aa35.91■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Tnrc6bQ8BKI2 1810 aaKnown RBP35.9■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Fchsd2Q3USJ8 740 aa35.9■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Pank1Q8K4K6 548 aa35.89■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Chmp5Q9D7S9 219 aa35.89■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Dip2bQ3UH60 1574 aa35.89■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Tspyl2Q7TQI8 677 aa35.88■■■■□ 3.34
Ldb1-208ENSMUST00000185355 Pik3c2bE9QAN8 1632 aa35.88■■■■□ 3.33
Ldb1-208ENSMUST00000185355 PzpQ61838 1495 aa35.87■■■■□ 3.33
Ldb1-208ENSMUST00000185355 Pik3r4Q8VD65 1358 aa35.85■■■■□ 3.33
Ldb1-208ENSMUST00000185355 B4galnt3Q6L8S8 986 aa35.85■■■■□ 3.33
Ldb1-208ENSMUST00000185355 Slc12a5Q91V14 1138 aa35.85■■■■□ 3.33
Ldb1-208ENSMUST00000185355 Arap3Q8R5G7 1538 aa35.83■■■■□ 3.33
Ldb1-208ENSMUST00000185355 Ppp1r15aP17564 657 aa35.82■■■■□ 3.33
Ldb1-208ENSMUST00000185355 IghaA0A0A6YXW6 389 aa35.81■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Dnajc5gQ8C632 165 aa35.8■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Ttc21aQ8C0S4 1314 aa35.8■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Atp7bQ64446 1462 aa35.8■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Polr3glQ8R0C0 218 aa35.79■■■■□ 3.32
Ldb1-208ENSMUST00000185355 PalmQ9Z0P4 383 aa35.78■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Ankrd50F7BE84 1390 aa35.78■■■■□ 3.32
Ldb1-208ENSMUST00000185355 CatipB9EKE5 520 aa35.77■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Spef2Q8C9J3 1734 aa35.76■■■■□ 3.32
Ldb1-208ENSMUST00000185355 Hoxb7P09024 217 aa35.76■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Q4VA45 678 aa35.75■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Sirt1Q923E4 737 aa35.75■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Safb2Q80YR5 991 aaKnown RBP35.74■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Swt1Q9DBQ9 907 aa35.74■■■■□ 3.31
Ldb1-208ENSMUST00000185355 N4bp2F8VQG7 1678 aaKnown RBP35.73■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Rreb1Q3UH06 1700 aaKnown RBP35.73■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Birc3O08863 600 aa35.72■■■■□ 3.31
Ldb1-208ENSMUST00000185355 CastP51125 788 aa35.72■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Znf316Q6PGE4 1016 aa35.72■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Dbr1Q923B1 550 aa35.72■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Duxf3A0A0N4SV92 674 aa35.71■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Mdc1Q5PSV9 1707 aa35.7■■■■□ 3.31
Ldb1-208ENSMUST00000185355 Chd4Q6PDQ2 1915 aaKnown RBP35.7■■■■□ 3.3
Ldb1-208ENSMUST00000185355 Trim26Q99PN3 545 aa35.69■■■■□ 3.3
Ldb1-208ENSMUST00000185355 Uhrf1bp1lA2RSJ4 1457 aa35.69■■■■□ 3.3
Ldb1-208ENSMUST00000185355 NudcO35685 332 aaKnown RBP35.69■■■■□ 3.3
Ldb1-208ENSMUST00000185355 Ccdc171E9Q1U1 1324 aa35.68■■■■□ 3.3
Ldb1-208ENSMUST00000185355 HnrnpmQ9D0E1 729 aaKnown RBP35.68■■■■□ 3.3
Ldb1-208ENSMUST00000185355 Rbm25B2RY56 838 aaKnown RBP35.65■■■■□ 3.3
Ldb1-208ENSMUST00000185355 Astn2Q80Z10 1352 aa35.63■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Znf335A2A5K6 1337 aa35.63■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Rims2Q9EQZ7 1530 aa35.62■■■■□ 3.29
Ldb1-208ENSMUST00000185355 D430041D05RikF6ZGR6 1678 aa35.61■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Rsph6aQ8CDR2 708 aa35.6■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Rlbp1Q9Z275 317 aa35.6■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Lmtk3Q5XJV6 1424 aa35.59■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Q3UJC8 639 aa35.58■■■■□ 3.29
Ldb1-208ENSMUST00000185355 NalcnQ8BXR5 1738 aa35.58■■■■□ 3.29
Ldb1-208ENSMUST00000185355 Med1Q925J9 1575 aa35.57■■■■□ 3.28
Ldb1-208ENSMUST00000185355 Kif20bQ80WE4 1774 aaKnown RBP35.56■■■■□ 3.28
Ldb1-208ENSMUST00000185355 Ccdc60Q8C4J0 545 aa35.55■■■■□ 3.28
Ldb1-208ENSMUST00000185355 Mon2Q80TL7 1715 aa35.52■■■■□ 3.28
Ldb1-208ENSMUST00000185355 Pcdh10E9PXQ7 1057 aa35.51■■■■□ 3.28
Ldb1-208ENSMUST00000185355 G3bp1P97855 465 aaKnown RBP35.5■■■■□ 3.27
Ldb1-208ENSMUST00000185355 CemipQ8BI06 1361 aa35.5■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Abcc10Q8R4P9 1501 aa35.49■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Cdc37l1Q9CZP7 335 aa35.49■■■■□ 3.27
Ldb1-208ENSMUST00000185355 C5P06684 1680 aa35.49■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Atl3Q91YH5 541 aa35.48■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Gnai1B2RSH2 354 aa35.48■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Plppr3Q7TPB0 716 aa35.48■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Gnai3Q9DC51 354 aa35.48■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Als2Q920R0 1651 aa35.47■■■■□ 3.27
Ldb1-208ENSMUST00000185355 ChgaP26339 463 aaKnown RBP35.46■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Nkx1-2P42580 305 aa35.46■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Hs1bp3Q3TC93 395 aa35.45■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Tmc1Q8R4P5 757 aa35.45■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Ccdc27Q3V036 639 aa35.45■■■■□ 3.27
Ldb1-208ENSMUST00000185355 Cdk12Q14AX6 1484 aaKnown RBP35.44■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Ppp1r3fQ9JIG4 799 aa35.44■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Pik3c2aQ61194 1686 aa35.44■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Bcl9Q9D219 1425 aa35.44■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Ubr1O70481 1757 aa35.43■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Trim30dE9PWL0 497 aa35.42■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Ipo8Q7TMY7 1010 aa35.42■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Iqcf3Q9D498 203 aa35.42■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Col16a1Q8BLX7 1580 aa35.41■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Sos1Q62245 1319 aa35.41■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Ppm1gQ61074 542 aa35.4■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Maco1Q7TQE6 664 aaKnown RBP35.4■■■■□ 3.26
Ldb1-208ENSMUST00000185355 4930407I10RikD3Z5T8 1512 aa35.4■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Eif4a2P10630 407 aa35.39■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Scn7aB1AYL1 1681 aa35.39■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Ccdc183A2AJB1 534 aa35.39■■■■□ 3.26
Ldb1-208ENSMUST00000185355 Ppp2r3aB2RXC8 1150 aa35.38■■■■□ 3.25
Ldb1-208ENSMUST00000185355 Cabp2Q9JLK4 216 aa35.38■■■■□ 3.25
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms