RNA–Protein interactions for RNA: ENSMUST00000160369.7

Ercc1-203, Transcript of DNA excision repair protein ERCC-1, mousemouse

TSL 1 (best) BASIC

Gene Ercc1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-203ENSMUST00000160369 Fbln2P37889 1221 aa19.03■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Arhgef1Q61210 920 aaKnown RBP19.03■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Fnbp4Q6ZQ03 1031 aa19.03■□□□□ 0.64
Ercc1-203ENSMUST00000160369 Lrrc59Q922Q8 307 aaKnown RBP19.03■□□□□ 0.64
Ercc1-203ENSMUST00000160369 PtprvP70289 1705 aa19.02■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Sema6bO54951 886 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Ncoa4Q5U4H9 625 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Emilin2Q8K482 1074 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Cntnap1O54991 1385 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 PrxO55103 1391 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 NinlQ6ZQ12 1394 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Astn2Q80Z10 1352 aa19.01■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Scaf1Q5U4C3 1256 aaKnown RBP19■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Pank3Q8R2W9 370 aa19■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Dzip1Q8BMD2 852 aa18.98■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Ddx54Q8K4L0 874 aaKnown RBP18.98■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Acsbg1Q99PU5 721 aa18.98■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Nhsl1Q8CAF4 1587 aa18.98■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Dennd6aQ8BH65 605 aa18.97■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Abca15E9PWH4 1668 aa18.97■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Siglec1Q62230 1695 aa18.97■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Tex14Q7M6U3 1450 aa18.97■□□□□ 0.63
Ercc1-203ENSMUST00000160369 PaskQ8CEE6 1383 aa18.96■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Gm21190A0A0G2JGJ6 266 aa18.96■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Smim5Q8BT42 78 aa18.96■□□□□ 0.63
Ercc1-203ENSMUST00000160369 Col16a1Q8BLX7 1580 aa18.95■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Kcnh5Q920E3 988 aa18.95■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Bcl9lQ67FY2 1494 aa18.95■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Slit2Q9R1B9 1521 aa18.95■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Ncapd2Q8K2Z4 1392 aa18.94■□□□□ 0.62
Ercc1-203ENSMUST00000160369 MypopQ8R4U1 393 aa18.94■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Inpp5dQ9ES52 1191 aa18.94■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Cdhr2E9Q7P9 1308 aa18.94■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Prdm10Q3UTQ7 1184 aa18.93■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Cdk12Q14AX6 1484 aaKnown RBP18.92■□□□□ 0.62
Ercc1-203ENSMUST00000160369 CemipQ8BI06 1361 aa18.92■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Nid2O88322 1403 aa18.91■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Zscan10Q3URR7 782 aa18.91■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Dcaf11Q91VU6 549 aa18.91■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Nlgn1Q99K10 843 aa18.91■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Tet3Q8BG87 1668 aa18.9■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Wdr66E9Q743 1299 aa18.9■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Cabp4Q8VHC5 271 aa18.9■□□□□ 0.62
Ercc1-203ENSMUST00000160369 Gm21698A0A087WQP8 267 aa18.89■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Gm21671G3UY31 267 aa18.89■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Rtl5Q5DTT4 599 aa18.89■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Cypt2Q6P924 180 aa18.89■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Dmrt2Q8BG36 561 aa18.89■□□□□ 0.61
Ercc1-203ENSMUST00000160369 IbtkQ6ZPR6 1352 aaKnown RBP18.89■□□□□ 0.61
Ercc1-203ENSMUST00000160369 GapdhsQ64467 440 aa18.88■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Aebp2Q9Z248 504 aaKnown RBP18.88■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Lrp6O88572 1613 aa18.88■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Fmnl2A2APV2 1086 aa18.87■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Hoxb7P09024 217 aa18.87■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Gprasp1Q5U4C1 1347 aa18.87■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Nfat5Q9WV30 1534 aa18.86■□□□□ 0.61
Ercc1-203ENSMUST00000160369 InhbeO08717 350 aa18.86■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Ano8Q6PB70 1060 aa18.86■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Txnrd1Q9JMH6 613 aa18.86■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Chd4Q6PDQ2 1915 aaKnown RBP18.86■□□□□ 0.61
Ercc1-203ENSMUST00000160369 TatQ8QZR1 454 aa18.85■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Smg6P61406 1418 aaKnown RBP18.84■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Mdc1Q5PSV9 1707 aa18.84■□□□□ 0.61
Ercc1-203ENSMUST00000160369 Card10P58660 1021 aa18.84■□□□□ 0.61
Ercc1-203ENSMUST00000160369 TnrQ8BYI9 1358 aa18.81■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Kif7B7ZNG0 1348 aa18.81■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Birc3O08863 600 aa18.81■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Zeb2Q9R0G7 1215 aa18.81■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Nckap5lQ6GQX2 1323 aa18.8■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Rad17Q6NXW6 688 aa18.8■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Slx1bQ8BX32 270 aa18.8■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Amotl2Q8K371 772 aa18.8■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Dnajc10Q9DC23 793 aa18.8■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Ubr1O70481 1757 aa18.8■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Nol11Q8BJW5 723 aaKnown RBP18.78■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Scn7aB1AYL1 1681 aa18.78■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Pard3Q99NH2 1333 aa18.77■□□□□ 0.6
Ercc1-203ENSMUST00000160369 FancaQ9JL70 1439 aa18.77■□□□□ 0.6
Ercc1-203ENSMUST00000160369 Sf3b2Q3UJB0 878 aaKnown RBP18.76■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Psrc1Q9D0P7 329 aa18.75■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Eno4Q8C042 619 aa18.74■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Map2P20357 1828 aa18.74■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Shank2Q80Z38 1476 aa18.73■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Anp32bQ9EST5 272 aaKnown RBP18.72■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Cald1E9QA15 768 aaKnown RBP18.71■□□□□ 0.59
Ercc1-203ENSMUST00000160369 Robo1O89026 1612 aa18.71■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Hoxc9P09633 260 aa18.7■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Pm20d1Q8C165 503 aa18.7■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Mapk8ip2Q9ERE9 830 aa18.7■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Plekhd1B2RPU2 505 aa18.69■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Zfp777B9EKF4 885 aa18.69■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Tmem132eQ6IEE6 982 aa18.68■□□□□ 0.58
Ercc1-203ENSMUST00000160369 TkfcQ8VC30 578 aa18.68■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Ccdc129Q14B48 1034 aa18.67■□□□□ 0.58
Ercc1-203ENSMUST00000160369 CrklP47941 303 aa18.66■□□□□ 0.58
Ercc1-203ENSMUST00000160369 RgmbQ7TQ33 436 aa18.66■□□□□ 0.58
Ercc1-203ENSMUST00000160369 OptnQ8K3K8 584 aa18.66■□□□□ 0.58
Ercc1-203ENSMUST00000160369 PnisrA2AJT4 805 aaKnown RBP18.65■□□□□ 0.58
Ercc1-203ENSMUST00000160369 Tnrc6cQ3UHC0 1690 aaKnown RBP18.64■□□□□ 0.57
Ercc1-203ENSMUST00000160369 Trim28Q62318 834 aa18.64■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 136.8 ms