RNA–Protein interactions for RNA: ENSMUST00000052747.3

Nhlrc1-201, Transcript of E3 ubiquitin-protein ligase NHLRC1, mousemouse

APPRIS P1 BASIC

Gene Nhlrc1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1-201ENSMUST00000052747 Ppp2r3aB2RXC8 1150 aa29.85■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 Ppp1r3fQ9JIG4 799 aa29.85■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 Q9D9H8 365 aa29.84■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 4933416C03RikQ3V063 378 aa29.83■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 Utp14aQ640M1 767 aaKnown RBP29.83■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 Cdk19Q8BWD8 501 aa29.83■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 Atp2b2Q9R0K7 1198 aa29.83■■■□□ 2.37
Nhlrc1-201ENSMUST00000052747 Ppp1r9bQ6R891 817 aaKnown RBP29.82■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 KarsQ99MN1 595 aaKnown RBP29.82■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 CltcQ68FD5 1675 aaKnown RBP29.82■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 Arhgef28P97433 1693 aa29.8■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 Cavin4A2AMM0 362 aa29.8■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 CastP51125 788 aa29.79■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 Ciz1Q8VEH2 845 aa29.78■■■□□ 2.36
Nhlrc1-201ENSMUST00000052747 Cluap1Q8R3P7 413 aa29.76■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Atl3Q91YH5 541 aa29.76■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Ttc21aQ8C0S4 1314 aa29.76■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Abca14E9Q8F8 1683 aa29.75■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 ArxO35085 564 aa29.74■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Ankrd50F7BE84 1390 aa29.74■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Uhrf1bp1B2KF50 1429 aa29.74■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Rbm25B2RY56 838 aaKnown RBP29.73■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Pnmal2G3X9N3 661 aa29.73■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 PrkcshO08795 521 aa29.72■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Ccdc60Q8C4J0 545 aa29.72■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Slc12a5Q91V14 1138 aa29.72■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 NktrP30415 1453 aa29.72■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 PaskQ8CEE6 1383 aa29.72■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 FanciQ8K368 1330 aa29.71■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Rangap1P46061 589 aaKnown RBP29.71■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Synj2Q9D2G5 1434 aa29.71■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Kif13aQ9EQW7 1749 aa29.71■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Afap1Q80YS6 731 aa29.7■■■□□ 2.35
Nhlrc1-201ENSMUST00000052747 Znf541Q0GGX2 1363 aa29.7■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Naip7Q9JIB3 1402 aa29.7■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 PalmQ9Z0P4 383 aa29.69■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Znf330Q922H9 316 aa29.69■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Plekhg1F6S200 1446 aa29.68■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Maco1Q7TQE6 664 aaKnown RBP29.67■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Gm6268A2A3U9 297 aa29.66■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 AU019823E9PUQ3 292 aa29.66■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Q4VA45 678 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Swt1Q9DBQ9 907 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Usp32F8VPZ3 1604 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Ccdc171E9Q1U1 1324 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Tbc1d32Q3URV1 1296 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Fchsd2Q3USJ8 740 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Itsn1Q9Z0R4 1714 aa29.65■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Sptbn5F6UCX4 1208 aa29.64■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Ecm2Q5FW85 670 aa29.64■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Trim28Q62318 834 aa29.64■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 Phlpp2Q8BXA7 1320 aa29.64■■■□□ 2.34
Nhlrc1-201ENSMUST00000052747 G3bp1P97855 465 aaKnown RBP29.63■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Irx3P81067 507 aa29.62■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Map3k19E9Q3S4 1311 aa29.62■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Pik3r4Q8VD65 1358 aa29.62■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Hs1bp3Q3TC93 395 aa29.61■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Rabep1O35551 862 aa29.6■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Pdlim2Q8R1G6 349 aa29.59■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Atp7bQ64446 1462 aa29.59■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Birc3O08863 600 aa29.59■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Tnpo1Q8BFY9 898 aaKnown RBP29.59■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Rsph4aQ8BYM7 716 aa29.59■■■□□ 2.33
Nhlrc1-201ENSMUST00000052747 Nutm1Q8BHP2 1126 aa29.57■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Nwd1A6H603 1563 aa29.55■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Ppp1r18Q8BQ30 594 aa29.55■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Asxl2Q8BZ32 1370 aa29.55■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 PplQ9R269 1755 aa29.55■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Mfap1aC0HKD8 439 aaKnown RBP29.55■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Mfap1bC0HKD9 439 aaKnown RBP29.55■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Map7O88735 730 aa29.54■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Gtf3c3Q3TMP1 882 aa29.54■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Nectin2P32507 530 aa29.54■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Htatsf1Q8BGC0 757 aa29.54■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Cdc37l1Q9CZP7 335 aa29.54■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Ppp1r15aP17564 657 aa29.53■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Tmco5bQ80X59 307 aa29.52■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Znf316Q6PGE4 1016 aa29.51■■■□□ 2.32
Nhlrc1-201ENSMUST00000052747 Nsd3Q6P2L6 1439 aa29.51■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Plekhm2Q80TQ5 1018 aa29.5■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Kif18aQ91WD7 886 aa29.5■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Ercc6l2Q9JIM3 1537 aa29.5■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 SkilQ60665 675 aa29.49■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Uhrf1bp1lA2RSJ4 1457 aa29.48■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Vamp4O70480 141 aa29.46■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Q3UPC7 1272 aa29.46■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Aldh1l1Q8R0Y6 902 aa29.46■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Zc3h13E9Q784 1729 aaKnown RBP29.46■■■□□ 2.31
Nhlrc1-201ENSMUST00000052747 Senp3Q9EP97 568 aaKnown RBP29.45■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 NpatQ8BMA5 1420 aa29.44■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Cog6Q8R3I3 657 aa29.43■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Gnai1B2RSH2 354 aa29.42■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Gnai3Q9DC51 354 aa29.42■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 MvpQ9EQK5 861 aa29.42■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Brd1E9PZ26 1189 aaKnown RBP29.42■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Dip2aQ8BWT5 1523 aa29.42■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Kif2cQ922S8 721 aa29.41■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Idi2Q8BFZ6 227 aa29.41■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Mcm10Q0VBD2 885 aa29.4■■■□□ 2.3
Nhlrc1-201ENSMUST00000052747 Psme1P97371 249 aa29.4■■■□□ 2.3
Retrieved 100 of 22,080 RNA–protein pairs in 129.5 ms