RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Ccdc171E9Q1U1 1324 aa11.88□□□□□ -0.51
Usp28-201ENSMUST00000047349 NinlQ6ZQ12 1394 aa11.88□□□□□ -0.51
Usp28-201ENSMUST00000047349 Gas2l2Q5SSG4 860 aa11.87□□□□□ -0.51
Usp28-201ENSMUST00000047349 Cep170bQ80U49 1574 aa11.87□□□□□ -0.51
Usp28-201ENSMUST00000047349 Trim26Q99PN3 545 aa11.87□□□□□ -0.51
Usp28-201ENSMUST00000047349 Hsp90ab1P11499 724 aaKnown RBP11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Iqcf3Q9D498 203 aa11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Uhrf1bp1B2KF50 1429 aa11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Hs1bp3Q3TC93 395 aa11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Mre11Q61216 706 aa11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Chmp4bQ9D8B3 224 aaKnown RBP11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Swt1Q9DBQ9 907 aa11.86□□□□□ -0.51
Usp28-201ENSMUST00000047349 Nkx1-2P42580 305 aa11.85□□□□□ -0.51
Usp28-201ENSMUST00000047349 Zc3h13E9Q784 1729 aaKnown RBP11.85□□□□□ -0.51
Usp28-201ENSMUST00000047349 Duxf3A0A0N4SV92 674 aa11.84□□□□□ -0.51
Usp28-201ENSMUST00000047349 Psme1P97371 249 aa11.84□□□□□ -0.51
Usp28-201ENSMUST00000047349 Kif13aQ9EQW7 1749 aa11.84□□□□□ -0.51
Usp28-201ENSMUST00000047349 Ccdc183A2AJB1 534 aa11.84□□□□□ -0.51
Usp28-201ENSMUST00000047349 Ak7Q9D2H2 614 aa11.84□□□□□ -0.51
Usp28-201ENSMUST00000047349 Ttc21aQ8C0S4 1314 aa11.83□□□□□ -0.51
Usp28-201ENSMUST00000047349 Ppp1r15aP17564 657 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Itsn1Q9Z0R4 1714 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Map7O88735 730 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 CastP51125 788 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Dip2aQ8BWT5 1523 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Usp32F8VPZ3 1604 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Abca14E9Q8F8 1683 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Ppp2r3aB2RXC8 1150 aa11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Rbm25B2RY56 838 aaKnown RBP11.83□□□□□ -0.52
Usp28-201ENSMUST00000047349 Trim28Q62318 834 aa11.82□□□□□ -0.52
Usp28-201ENSMUST00000047349 Ankrd50F7BE84 1390 aa11.82□□□□□ -0.52
Usp28-201ENSMUST00000047349 Zfp777B9EKF4 885 aa11.82□□□□□ -0.52
Usp28-201ENSMUST00000047349 Txndc2Q6P902 515 aa11.82□□□□□ -0.52
Usp28-201ENSMUST00000047349 Zranb1Q7M760 708 aa11.82□□□□□ -0.52
Usp28-201ENSMUST00000047349 NktrP30415 1453 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 Map3k19E9Q3S4 1311 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 Hoxb7P09024 217 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 Idi2Q8BFZ6 227 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 G3bp1P97855 465 aaKnown RBP11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 4930567H17RikQ3V0K5 233 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 Ccdc60Q8C4J0 545 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 Bcl11aQ9QYE3 773 aa11.81□□□□□ -0.52
Usp28-201ENSMUST00000047349 Slc12a5Q91V14 1138 aa11.8□□□□□ -0.52
Usp28-201ENSMUST00000047349 PalmQ9Z0P4 383 aa11.8□□□□□ -0.52
Usp28-201ENSMUST00000047349 Atp7bQ64446 1462 aa11.8□□□□□ -0.52
Usp28-201ENSMUST00000047349 PplQ9R269 1755 aa11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 RictorQ6QI06 1708 aa11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 Birc3O08863 600 aa11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 DiexfQ8BTT6 772 aaKnown RBP11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 Sart3Q9JLI8 962 aaKnown RBP11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 Gnai1B2RSH2 354 aa11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 Gnai3Q9DC51 354 aa11.79□□□□□ -0.52
Usp28-201ENSMUST00000047349 Nwd1A6H603 1563 aa11.78□□□□□ -0.52
Usp28-201ENSMUST00000047349 DaxxO35613 739 aa11.78□□□□□ -0.52
Usp28-201ENSMUST00000047349 Rlbp1Q9Z275 317 aa11.78□□□□□ -0.52
Usp28-201ENSMUST00000047349 Gemin5Q8BX17 1502 aaKnown RBP11.78□□□□□ -0.52
Usp28-201ENSMUST00000047349 Armcx1Q9CX83 456 aa11.77□□□□□ -0.52
Usp28-201ENSMUST00000047349 Pik3r4Q8VD65 1358 aa11.77□□□□□ -0.53
Usp28-201ENSMUST00000047349 PtpruB1AUH1 1446 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 CatipB9EKE5 520 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 Kif1aP33173 1695 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 Ercc6l2Q9JIM3 1537 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 Sos1Q62245 1319 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 Htatsf1Q8BGC0 757 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 Gm6268A2A3U9 297 aa11.76□□□□□ -0.53
Usp28-201ENSMUST00000047349 4933416C03RikQ3V063 378 aa11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 Eif2s2Q99L45 331 aaKnown RBP11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 KnstrnQ9D9Z1 312 aaKnown RBP11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 Q4VA45 678 aa11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 Cdc37l1Q9CZP7 335 aa11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 Phlpp2Q8BXA7 1320 aa11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 Ppp1r9bQ6R891 817 aaKnown RBP11.75□□□□□ -0.53
Usp28-201ENSMUST00000047349 Cps1Q8C196 1500 aa11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 Rabep1O35551 862 aa11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 Maco1Q7TQE6 664 aaKnown RBP11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 KarsQ99MN1 595 aaKnown RBP11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 Aldh1l1Q8R0Y6 902 aa11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 Cluap1Q8R3P7 413 aa11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 Sirt1Q923E4 737 aa11.74□□□□□ -0.53
Usp28-201ENSMUST00000047349 Astn2Q80Z10 1352 aa11.73□□□□□ -0.53
Usp28-201ENSMUST00000047349 SkilQ60665 675 aa11.73□□□□□ -0.53
Usp28-201ENSMUST00000047349 Znf316Q6PGE4 1016 aa11.73□□□□□ -0.53
Usp28-201ENSMUST00000047349 PzpQ61838 1495 aa11.73□□□□□ -0.53
Usp28-201ENSMUST00000047349 Wwc1Q5SXA9 1104 aa11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Cavin2Q63918 418 aaKnown RBP11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Safb2Q80YR5 991 aaKnown RBP11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Stk31Q99MW1 1018 aa11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Znf335A2A5K6 1337 aa11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Tmco5bQ80X59 307 aa11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Rsph6aQ8CDR2 708 aa11.72□□□□□ -0.53
Usp28-201ENSMUST00000047349 Tbc1d32Q3URV1 1296 aa11.71□□□□□ -0.53
Usp28-201ENSMUST00000047349 Plekhm2Q80TQ5 1018 aa11.71□□□□□ -0.53
Usp28-201ENSMUST00000047349 Cetn4Q8K4K1 168 aa11.71□□□□□ -0.53
Usp28-201ENSMUST00000047349 Znf330Q922H9 316 aa11.71□□□□□ -0.53
Usp28-201ENSMUST00000047349 HnrnpuQ8VEK3 800 aaKnown RBP11.71□□□□□ -0.53
Usp28-201ENSMUST00000047349 MvpQ9EQK5 861 aa11.71□□□□□ -0.53
Usp28-201ENSMUST00000047349 Asxl2Q8BZ32 1370 aa11.71□□□□□ -0.54
Usp28-201ENSMUST00000047349 Sptbn5F6UCX4 1208 aa11.7□□□□□ -0.54
Usp28-201ENSMUST00000047349 Uhrf1bp1lA2RSJ4 1457 aa11.7□□□□□ -0.54
Usp28-201ENSMUST00000047349 Spef2Q8C9J3 1734 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms