RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 NischQ80TM9 1593 aa17.99■□□□□ 0.47
Usp28-201ENSMUST00000047349 Gm35339A0A140LHH9 1649 aa17.7■□□□□ 0.42
Usp28-201ENSMUST00000047349 Abcc9P70170 1546 aa17.47■□□□□ 0.39
Usp28-201ENSMUST00000047349 Abcc8B2RUS7 1588 aa17.06■□□□□ 0.32
Usp28-201ENSMUST00000047349 Rhox8Q6VSS7 320 aa16.68■□□□□ 0.26
Usp28-201ENSMUST00000047349 Rtl1Q7M732 1744 aa16.59■□□□□ 0.25
Usp28-201ENSMUST00000047349 Ccdc180J3QNE4 1664 aa16.23■□□□□ 0.19
Usp28-201ENSMUST00000047349 Dcaf1Q80TR8 1506 aa16.04■□□□□ 0.16
Usp28-201ENSMUST00000047349 ScribQ80U72 1612 aa15.82■□□□□ 0.12
Usp28-201ENSMUST00000047349 Rb1cc1Q9ESK9 1588 aa15.77■□□□□ 0.11
Usp28-201ENSMUST00000047349 Zcchc6Q5BLK4 1491 aaKnown RBP15.77■□□□□ 0.11
Usp28-201ENSMUST00000047349 Baz1aO88379 1555 aa15.61■□□□□ 0.09
Usp28-201ENSMUST00000047349 Kdm5dQ62240 1548 aa15.6■□□□□ 0.09
Usp28-201ENSMUST00000047349 NacadQ5SWP3 1504 aa15.57■□□□□ 0.08
Usp28-201ENSMUST00000047349 HrcG5E8J6 738 aa15.45■□□□□ 0.06
Usp28-201ENSMUST00000047349 Rpgrip1Q9EPQ2 1331 aa15.4■□□□□ 0.06
Usp28-201ENSMUST00000047349 Crybg2B7ZCC2 1516 aa15.39■□□□□ 0.05
Usp28-201ENSMUST00000047349 Ccdc136Q3TVA9 1136 aa15.38■□□□□ 0.05
Usp28-201ENSMUST00000047349 Trim41Q5NCC3 630 aa15.25■□□□□ 0.03
Usp28-201ENSMUST00000047349 Smarca2Q6DIC0 1577 aa15.22■□□□□ 0.03
Usp28-201ENSMUST00000047349 Sycp2Q9CUU3 1500 aa15.18■□□□□ 0.02
Usp28-201ENSMUST00000047349 Acin1Q9JIX8 1338 aaKnown RBP15.01□□□□□ -0.01
Usp28-201ENSMUST00000047349 Cep164Q5DU05 1446 aa14.97□□□□□ -0.01
Usp28-201ENSMUST00000047349 Brd4Q9ESU6 1400 aaKnown RBP14.97□□□□□ -0.01
Usp28-201ENSMUST00000047349 Cngb1E1AZ71 1325 aa14.79□□□□□ -0.04
Usp28-201ENSMUST00000047349 Ehmt2Q9Z148 1263 aaKnown RBP14.78□□□□□ -0.04
Usp28-201ENSMUST00000047349 Cecr2E9Q2Z1 1453 aa14.76□□□□□ -0.05
Usp28-201ENSMUST00000047349 Golga3P55937 1487 aa14.75□□□□□ -0.05
Usp28-201ENSMUST00000047349 BicraF8VPZ9 1578 aa14.75□□□□□ -0.05
Usp28-201ENSMUST00000047349 Synj1Q8CHC4 1574 aa14.7□□□□□ -0.06
Usp28-201ENSMUST00000047349 Rsf1E9PWW9 1441 aaKnown RBP14.66□□□□□ -0.06
Usp28-201ENSMUST00000047349 CftrP26361 1476 aa14.64□□□□□ -0.07
Usp28-201ENSMUST00000047349 Esf1Q3V1V3 845 aaKnown RBP14.64□□□□□ -0.07
Usp28-201ENSMUST00000047349 Cttnbp2B9EJA2 1648 aa14.62□□□□□ -0.07
Usp28-201ENSMUST00000047349 Chic1Q8CBW7 227 aa14.6□□□□□ -0.07
Usp28-201ENSMUST00000047349 Smarca4Q3TKT4 1613 aaKnown RBP14.56□□□□□ -0.08
Usp28-201ENSMUST00000047349 Ccdc88bQ4QRL3 1481 aa14.55□□□□□ -0.08
Usp28-201ENSMUST00000047349 Gab3Q8BSM5 595 aa14.54□□□□□ -0.08
Usp28-201ENSMUST00000047349 Top2bQ64511 1612 aa14.53□□□□□ -0.08
Usp28-201ENSMUST00000047349 Fmn1Q05860 1466 aa14.39□□□□□ -0.11
Usp28-201ENSMUST00000047349 Cc2d2aQ8CFW7 1633 aa14.34□□□□□ -0.11
Usp28-201ENSMUST00000047349 Iqgap2Q3UQ44 1575 aa14.33□□□□□ -0.11
Usp28-201ENSMUST00000047349 Atad2bE9Q166 1460 aaKnown RBP14.31□□□□□ -0.12
Usp28-201ENSMUST00000047349 NefmP08553 848 aa14.3□□□□□ -0.12
Usp28-201ENSMUST00000047349 Pds5bQ4VA53 1446 aaKnown RBP14.28□□□□□ -0.12
Usp28-201ENSMUST00000047349 Top2aQ01320 1528 aaKnown RBP14.27□□□□□ -0.13
Usp28-201ENSMUST00000047349 Rapgef2Q8CHG7 1496 aa14.26□□□□□ -0.13
Usp28-201ENSMUST00000047349 Pcgf6Q99NA9 353 aa14.25□□□□□ -0.13
Usp28-201ENSMUST00000047349 Mier1Q5UAK0 511 aa14.15□□□□□ -0.14
Usp28-201ENSMUST00000047349 Cep162Q6ZQ06 1403 aa14.15□□□□□ -0.14
Usp28-201ENSMUST00000047349 Npm2Q80W85 207 aa14.13□□□□□ -0.15
Usp28-201ENSMUST00000047349 TnnQ80Z71 1560 aa14.09□□□□□ -0.15
Usp28-201ENSMUST00000047349 Myt1lP97500 1187 aa14.07□□□□□ -0.16
Usp28-201ENSMUST00000047349 Ercc6F8VPZ5 1481 aa14.05□□□□□ -0.16
Usp28-201ENSMUST00000047349 Wdr62Q3U3T8 1523 aa14.04□□□□□ -0.16
Usp28-201ENSMUST00000047349 Supt5hO55201 1082 aaKnown RBP14.02□□□□□ -0.17
Usp28-201ENSMUST00000047349 UbtfP25976 765 aaKnown RBP14.01□□□□□ -0.17
Usp28-201ENSMUST00000047349 Frmpd1A2AKB4 1549 aa14.01□□□□□ -0.17
Usp28-201ENSMUST00000047349 Zeb1Q64318 1117 aa14□□□□□ -0.17
Usp28-201ENSMUST00000047349 Lamc3Q9R0B6 1581 aa13.98□□□□□ -0.17
Usp28-201ENSMUST00000047349 Clip1Q922J3 1391 aa13.97□□□□□ -0.17
Usp28-201ENSMUST00000047349 Eif4g1Q6NZJ6 1600 aaKnown RBP13.97□□□□□ -0.17
Usp28-201ENSMUST00000047349 Las1lA2BE28 776 aaKnown RBP13.93□□□□□ -0.18
Usp28-201ENSMUST00000047349 Kif15Q6P9L6 1387 aa13.93□□□□□ -0.18
Usp28-201ENSMUST00000047349 NrkQ9R0G8 1455 aa13.91□□□□□ -0.18
Usp28-201ENSMUST00000047349 Ccdc18Q640L5 1455 aa13.89□□□□□ -0.19
Usp28-201ENSMUST00000047349 Arhgap35Q91YM2 1499 aa13.88□□□□□ -0.19
Usp28-201ENSMUST00000047349 Shroom4Q1W617 1475 aa13.87□□□□□ -0.19
Usp28-201ENSMUST00000047349 Map3k1P53349 1493 aa13.86□□□□□ -0.19
Usp28-201ENSMUST00000047349 Eea1Q8BL66 1411 aa13.86□□□□□ -0.19
Usp28-201ENSMUST00000047349 Camsap1A2AHC3 1581 aa13.86□□□□□ -0.19
Usp28-201ENSMUST00000047349 Il27Q8K3I6 234 aa13.85□□□□□ -0.19
Usp28-201ENSMUST00000047349 PtprkP35822 1457 aa13.8□□□□□ -0.2
Usp28-201ENSMUST00000047349 Unc13aQ4KUS2 1712 aa13.79□□□□□ -0.2
Usp28-201ENSMUST00000047349 Plekhg3Q4VAC9 1341 aa13.79□□□□□ -0.2
Usp28-201ENSMUST00000047349 Phldb1Q6PDH0 1371 aaKnown RBP13.79□□□□□ -0.2
Usp28-201ENSMUST00000047349 Grin2bQ01097 1482 aa13.77□□□□□ -0.2
Usp28-201ENSMUST00000047349 Setd5Q5XJV7 1441 aa13.76□□□□□ -0.21
Usp28-201ENSMUST00000047349 Ncapd3Q6ZQK0 1506 aa13.73□□□□□ -0.21
Usp28-201ENSMUST00000047349 TonslQ6NZL6 1363 aa13.73□□□□□ -0.21
Usp28-201ENSMUST00000047349 Arhgef5E9Q7D5 1581 aa13.73□□□□□ -0.21
Usp28-201ENSMUST00000047349 Wdr66E9Q743 1299 aa13.73□□□□□ -0.21
Usp28-201ENSMUST00000047349 Sall2Q9QX96 1004 aa13.73□□□□□ -0.21
Usp28-201ENSMUST00000047349 Arap1Q4LDD4 1452 aa13.72□□□□□ -0.21
Usp28-201ENSMUST00000047349 AqrQ8CFQ3 1481 aaKnown RBP13.71□□□□□ -0.21
Usp28-201ENSMUST00000047349 Mroh2bQ7M6Y6 1581 aa13.71□□□□□ -0.21
Usp28-201ENSMUST00000047349 Npm1Q61937 292 aaKnown RBP13.71□□□□□ -0.22
Usp28-201ENSMUST00000047349 Cux2P70298 1426 aa13.68□□□□□ -0.22
Usp28-201ENSMUST00000047349 Baz1bQ9Z277 1479 aa13.68□□□□□ -0.22
Usp28-201ENSMUST00000047349 Thoc2B1AZI6 1594 aaKnown RBP13.68□□□□□ -0.22
Usp28-201ENSMUST00000047349 ClspnQ80YR7 1315 aa13.68□□□□□ -0.22
Usp28-201ENSMUST00000047349 Ubl4bQ9CQ84 188 aa13.66□□□□□ -0.22
Usp28-201ENSMUST00000047349 Efcab5A0JP43 1406 aa13.66□□□□□ -0.22
Usp28-201ENSMUST00000047349 Tiam1Q60610 1591 aa13.65□□□□□ -0.22
Usp28-201ENSMUST00000047349 Erich3F6QRE9 1637 aa13.65□□□□□ -0.22
Usp28-201ENSMUST00000047349 Ap3b1Q9Z1T1 1105 aa13.65□□□□□ -0.22
Usp28-201ENSMUST00000047349 Carmil1Q6EDY6 1374 aa13.63□□□□□ -0.23
Usp28-201ENSMUST00000047349 LrpprcQ6PB66 1392 aaKnown RBP13.61□□□□□ -0.23
Usp28-201ENSMUST00000047349 Fam135aQ6NS59 1506 aa13.6□□□□□ -0.23
Usp28-201ENSMUST00000047349 Ankrd26Q811D2 1581 aa13.6□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 120 ms