RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDB1	YPR184W	CLC1	P17891	233 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	TPS3	P38426	1054 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	CWC21	Q03375	135 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	YIL055C	P40523	627 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	SGD1	Q06132	899 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	VHS3	Q08438	674 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	PLP2	Q12017	286 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	RPO41	P13433	1351 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	NGR1	P32831	672 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	RRP5	Q05022	1729 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	PDR11	P40550	1411 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	CLB3	P24870	427 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	CDC48	P25694	835 aa	Known RBP	5.68	□□□□□ -1.5
GDB1	YPR184W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
GDB1	YPR184W	CEX1	Q12453	761 aa		5.68	□□□□□ -1.5
GDB1	YPR184W	RPL19A	P0CX82	189 aa	Known RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	RPL19B	P0CX83	189 aa	Predicted RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	DPH6	Q12429	685 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.67	□□□□□ -1.5	not detected
GDB1	YPR184W	ALT2	P52892	507 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	ATG1	P53104	897 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	CEF1	Q03654	590 aa	Predicted RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	YAH1	Q12184	172 aa	Known RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	RUD3	Q12234	484 aa	Known RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	HCA4	P20448	770 aa	Known RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	GEF1	P37020	779 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	SAP185	P40856	1058 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	LYS14	P40971	790 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	CNM67	P53865	581 aa	Known RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	FRK1	Q03002	865 aa	Predicted RBP	5.67	□□□□□ -1.5
GDB1	YPR184W	CIT1	P00890	479 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	GSY1	P23337	708 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	VAB2	P40003	282 aa		5.67	□□□□□ -1.5
GDB1	YPR184W	CDC37	P06101	506 aa	Known RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	NOC2	P39744	710 aa	Known RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	RRG1	Q12167	365 aa	Predicted RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	BUD2	P33314	1104 aa		5.66	□□□□□ -1.5
GDB1	YPR184W	UTP9	P38882	575 aa	Known RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	APC1	P53886	1748 aa		5.66	□□□□□ -1.5
GDB1	YPR184W	TRP5	P00931	707 aa	Known RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	RPL8A	P17076	256 aa	Known RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	GPT2	P36148	743 aa		5.66	□□□□□ -1.5
GDB1	YPR184W	FYV10	P40492	516 aa		5.66	□□□□□ -1.5
GDB1	YPR184W	SDA1	P53313	767 aa	Known RBP	5.66	□□□□□ -1.5
GDB1	YPR184W	OSW2	Q12202	724 aa		5.66	□□□□□ -1.5
GDB1	YPR184W	UBC6	P33296	250 aa	Predicted RBP	5.65	□□□□□ -1.5
GDB1	YPR184W	OPY1	P38271	328 aa		5.65	□□□□□ -1.5
GDB1	YPR184W	GTT3	P39996	337 aa		5.65	□□□□□ -1.5
GDB1	YPR184W	IRC8	P47046	822 aa		5.65	□□□□□ -1.5
GDB1	YPR184W	PRD1	P25375	712 aa		5.65	□□□□□ -1.5
GDB1	YPR184W	SMY2	P32909	740 aa	Known RBP	5.65	□□□□□ -1.5
GDB1	YPR184W	NIP100	P33420	868 aa		5.65	□□□□□ -1.5
GDB1	YPR184W	YLL058W	Q12198	575 aa		5.65	□□□□□ -1.5
GDB1	YPR184W	RPN11	P43588	306 aa	Known RBP	5.65	□□□□□ -1.51
GDB1	YPR184W	UTP22	P53254	1237 aa	Predicted RBP	5.65	□□□□□ -1.51
GDB1	YPR184W	GDE1	Q02979	1223 aa		5.65	□□□□□ -1.51
GDB1	YPR184W	REB1	P21538	810 aa		5.65	□□□□□ -1.51
GDB1	YPR184W	MRF1	P30775	413 aa	Predicted RBP	5.65	□□□□□ -1.51
GDB1	YPR184W	SIP3	P38717	1229 aa		5.65	□□□□□ -1.51
GDB1	YPR184W	STU2	P46675	888 aa		5.65	□□□□□ -1.51
GDB1	YPR184W	SQS1	P53866	767 aa	Known RBP	5.65	□□□□□ -1.51
GDB1	YPR184W	TAF10	Q12030	206 aa		5.65	□□□□□ -1.51
GDB1	YPR184W	CFT2	Q12102	859 aa	Predicted RBP	5.65	□□□□□ -1.51
GDB1	YPR184W	HXK1	P04806	485 aa	Known RBP	5.64	□□□□□ -1.51
GDB1	YPR184W	CTT1	P06115	562 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	PUP2	P32379	260 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	SPC72	P39723	622 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	MET1	P36150	593 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	JIP4	Q03361	876 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	DCD1	P06773	312 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	BOI1	P38041	980 aa	Known RBP	5.64	□□□□□ -1.51
GDB1	YPR184W	YBL036C	P38197	257 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	YCG1	Q06680	1035 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	TIP41	Q12199	356 aa		5.64	□□□□□ -1.51
GDB1	YPR184W	YKU70	P32807	602 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	ARL1	P38116	183 aa	Known RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	ACK1	Q07622	623 aa	Predicted RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	ROM2	P51862	1356 aa	Known RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	SLD2	P34252	453 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	YKL222C	P35995	705 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	APL2	P36000	726 aa	Predicted RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	RRM3	P38766	723 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	UBP10	P53874	792 aa	Predicted RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	YOL057W	Q08225	711 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	NOP58	Q12499	511 aa	Known RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	MSH3	P25336	1018 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	TOM71	P38825	639 aa	Known RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	HSP82	P02829	709 aa	Known RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	RGP1	P16664	663 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	RPC53	P25441	422 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	APP1	P53933	587 aa		5.63	□□□□□ -1.51
GDB1	YPR184W	SEC7	P11075	2009 aa	Known RBP	5.63	□□□□□ -1.51
GDB1	YPR184W	YMR074C	Q04773	145 aa		5.62	□□□□□ -1.51
GDB1	YPR184W	ADE6	P38972	1358 aa	Known RBP	5.62	□□□□□ -1.51
GDB1	YPR184W	COB	P00163	385 aa		5.62	□□□□□ -1.51
GDB1	YPR184W	RPN3	P40016	523 aa	Known RBP	5.62	□□□□□ -1.51
GDB1	YPR184W	SPO22	P40511	975 aa		5.62	□□□□□ -1.51
GDB1	YPR184W	GSM1	P42950	618 aa		5.62	□□□□□ -1.51
GDB1	YPR184W	URB2	P47108	1174 aa		5.62	□□□□□ -1.51
GDB1	YPR184W	FAR11	P53917	953 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms