RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C GPA1P08539 472 aa8.54□□□□□ -1.04
RUP1YOR138C MAL33P38157 468 aa8.54□□□□□ -1.04
RUP1YOR138C RFC5P38251 354 aa8.54□□□□□ -1.04
RUP1YOR138C SET1P38827 1080 aaKnown RBP8.54□□□□□ -1.04
RUP1YOR138C YKE2P52553 114 aa8.54□□□□□ -1.04
RUP1YOR138C SSP2Q08646 371 aa8.54□□□□□ -1.04
RUP1YOR138C IMP2'P32351 346 aa8.53□□□□□ -1.04
RUP1YOR138C PTP3P40048 928 aa8.53□□□□□ -1.04
RUP1YOR138C EPS1P40557 701 aa8.53□□□□□ -1.04
RUP1YOR138C BUD6P41697 788 aa8.53□□□□□ -1.04
RUP1YOR138C YPR204WQ08995 1032 aa8.53□□□□□ -1.04
RUP1YOR138C YPL150WQ12152 901 aa8.53□□□□□ -1.04
RUP1YOR138C RPL17AP05740 184 aaKnown RBP8.53□□□□□ -1.04
RUP1YOR138C YKL133CP36066 463 aa8.53□□□□□ -1.04
RUP1YOR138C YHL017WP38745 532 aa8.53□□□□□ -1.04
RUP1YOR138C RPL17BP46990 184 aaKnown RBP8.53□□□□□ -1.04
RUP1YOR138C YLR271WQ06152 274 aa8.53□□□□□ -1.04
RUP1YOR138C GYP5Q12344 894 aa8.53□□□□□ -1.04
RUP1YOR138C SUP35P05453 685 aaKnown RBP8.52□□□□□ -1.05
RUP1YOR138C TCD1P38756 429 aa8.52□□□□□ -1.05
RUP1YOR138C RRM3P38766 723 aa8.52□□□□□ -1.05
RUP1YOR138C NOC2P39744 710 aaKnown RBP8.52□□□□□ -1.05
RUP1YOR138C IES2P40154 320 aa8.52□□□□□ -1.05
RUP1YOR138C FYV10P40492 516 aa8.52□□□□□ -1.05
RUP1YOR138C SNU66Q12420 587 aaPredicted RBP8.52□□□□□ -1.05
RUP1YOR138C RPN7Q06103 429 aaKnown RBP8.51□□□□□ -1.05
RUP1YOR138C TUM1Q08686 304 aaKnown RBP8.51□□□□□ -1.05
RUP1YOR138C CTI6Q08923 506 aa8.51□□□□□ -1.05
RUP1YOR138C TFC8Q12308 588 aa8.51□□□□□ -1.05
RUP1YOR138C YNL193WP53870 558 aa8.51□□□□□ -1.05
RUP1YOR138C MATALPHA2P0CY08 210 aa8.5□□□□□ -1.05
RUP1YOR138C HMLALPHA2P0CY09 210 aa8.5□□□□□ -1.05
RUP1YOR138C SEC18P18759 758 aaKnown RBP8.5□□□□□ -1.05
RUP1YOR138C FBP26P32604 452 aa8.5□□□□□ -1.05
RUP1YOR138C LTV1P34078 463 aa8.5□□□□□ -1.05
RUP1YOR138C SIS2P36024 562 aa8.5□□□□□ -1.05
RUP1YOR138C YMR147WP40218 223 aaKnown RBP8.5□□□□□ -1.05
RUP1YOR138C OSW7P43611 510 aa8.5□□□□□ -1.05
RUP1YOR138C PEP3P27801 918 aa8.49□□□□□ -1.05
RUP1YOR138C EPL1P43572 832 aa8.49□□□□□ -1.05
RUP1YOR138C ARG8P18544 423 aa8.49□□□□□ -1.05
RUP1YOR138C OSH3P38713 996 aaKnown RBP8.49□□□□□ -1.05
RUP1YOR138C CTH1P47976 325 aa8.49□□□□□ -1.05
RUP1YOR138C YGL082WP53155 381 aa8.49□□□□□ -1.05
RUP1YOR138C UBP16Q02863 499 aa8.49□□□□□ -1.05
RUP1YOR138C CEP3P40969 608 aa8.48□□□□□ -1.05
RUP1YOR138C YPT11P48559 417 aa8.48□□□□□ -1.05
RUP1YOR138C MTC5Q03897 1148 aa8.48□□□□□ -1.05
RUP1YOR138C MSB4Q12317 492 aa8.48□□□□□ -1.05
RUP1YOR138C ENT1Q12518 454 aa8.48□□□□□ -1.05
RUP1YOR138C DCD1P06773 312 aa8.47□□□□□ -1.05
RUP1YOR138C REB1P21538 810 aa8.47□□□□□ -1.05
RUP1YOR138C SRP40P32583 406 aaPredicted RBP8.47□□□□□ -1.05
RUP1YOR138C BBC1P47068 1157 aa8.47□□□□□ -1.05
RUP1YOR138C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
RUP1YOR138C WAR1Q03631 944 aa8.47□□□□□ -1.05
RUP1YOR138C RRI2Q12348 645 aa8.47□□□□□ -1.05
RUP1YOR138C HSP82P02829 709 aaKnown RBP8.47□□□□□ -1.05
RUP1YOR138C OPI1P21957 404 aa8.47□□□□□ -1.05
RUP1YOR138C GSY2P27472 705 aa8.47□□□□□ -1.05
RUP1YOR138C RGP1P16664 663 aa8.46□□□□□ -1.05
RUP1YOR138C SPB4P25808 606 aaPredicted RBP8.46□□□□□ -1.05
RUP1YOR138C RAD26P40352 1085 aa8.46□□□□□ -1.05
RUP1YOR138C SRC1Q03707 834 aa8.46□□□□□ -1.05
RUP1YOR138C YRF1-3P0CX14 1859 aa8.46□□□□□ -1.06
RUP1YOR138C YRF1-7P0CX15 1859 aa8.46□□□□□ -1.06
RUP1YOR138C YRF1-6P53819 1859 aa8.46□□□□□ -1.06
RUP1YOR138C HCA4P20448 770 aaKnown RBP8.46□□□□□ -1.06
RUP1YOR138C SER1P33330 395 aaKnown RBP8.46□□□□□ -1.06
RUP1YOR138C YLR407WQ06070 228 aa8.46□□□□□ -1.06
RUP1YOR138C YKT6P36015 200 aaKnown RBP8.45□□□□□ -1.06
RUP1YOR138C PRP31P49704 494 aaPredicted RBP8.45□□□□□ -1.06
RUP1YOR138C VPS60Q03390 229 aa8.45□□□□□ -1.06
RUP1YOR138C CDC15P27636 974 aa8.44□□□□□ -1.06
RUP1YOR138C HXK1P04806 485 aaKnown RBP8.44□□□□□ -1.06
RUP1YOR138C PRI1P10363 409 aa8.44□□□□□ -1.06
RUP1YOR138C TFG2P41896 400 aaPredicted RBP8.44□□□□□ -1.06
RUP1YOR138C PHM7Q12252 991 aa8.44□□□□□ -1.06
RUP1YOR138C LAM4P38800 1345 aa8.43□□□□□ -1.06
RUP1YOR138C PGI1P12709 554 aaKnown RBP8.43□□□□□ -1.06
RUP1YOR138C DIT2P21595 489 aa8.43□□□□□ -1.06
RUP1YOR138C MCM4P30665 933 aaKnown RBP8.43□□□□□ -1.06
RUP1YOR138C DMA1P38823 416 aa8.43□□□□□ -1.06
RUP1YOR138C ENP2P48234 707 aaKnown RBP8.43□□□□□ -1.06
RUP1YOR138C PFK2P16862 959 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
RUP1YOR138C PET123P17558 318 aa8.42□□□□□ -1.06
RUP1YOR138C UTP13Q05946 817 aaKnown RBP8.42□□□□□ -1.06
RUP1YOR138C ENV9Q08651 330 aa8.42□□□□□ -1.06
RUP1YOR138C COBP00163 385 aa8.42□□□□□ -1.06
RUP1YOR138C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.42□□□□□ -1.06not detected
RUP1YOR138C MET1P36150 593 aa8.42□□□□□ -1.06
RUP1YOR138C CIN4P39110 191 aa8.42□□□□□ -1.06
RUP1YOR138C UBP10P53874 792 aaPredicted RBP8.42□□□□□ -1.06
RUP1YOR138C APL4Q12028 832 aa8.42□□□□□ -1.06
RUP1YOR138C SSF2Q12153 453 aaPredicted RBP8.42□□□□□ -1.06
RUP1YOR138C UTP10P42945 1769 aaKnown RBP8.42□□□□□ -1.06
RUP1YOR138C PSY4P38193 441 aa8.41□□□□□ -1.06
RUP1YOR138C RFT1P38206 574 aaPredicted RBP8.41□□□□□ -1.06
RUP1YOR138C ALD3P54114 506 aa8.41□□□□□ -1.06
RUP1YOR138C ECM23Q02710 187 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms