RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W MRPS35P53292 345 aa9.74□□□□□ -0.85
YPT11YNL304W FAP1P53971 965 aa9.74□□□□□ -0.85
YPT11YNL304W KIN4Q01919 800 aa9.74□□□□□ -0.85
YPT11YNL304W RIM20Q12033 661 aa9.74□□□□□ -0.85
YPT11YNL304W TOP1P04786 769 aa9.73□□□□□ -0.85
YPT11YNL304W RET1P22276 1149 aaKnown RBP9.73□□□□□ -0.85
YPT11YNL304W SPL2P38839 148 aa9.73□□□□□ -0.85
YPT11YNL304W IRC4Q03036 179 aa9.73□□□□□ -0.85
YPT11YNL304W DUR1,2P32528 1835 aaKnown RBP9.72□□□□□ -0.85
YPT11YNL304W INM2Q05533 292 aa9.72□□□□□ -0.85
YPT11YNL304W GEF1P37020 779 aa9.71□□□□□ -0.86
YPT11YNL304W GLO3P38682 493 aaKnown RBP9.71□□□□□ -0.86
YPT11YNL304W HAL5P38970 855 aaKnown RBP9.71□□□□□ -0.86
YPT11YNL304W CYB2P00175 591 aa9.7□□□□□ -0.86
YPT11YNL304W OPI1P21957 404 aa9.7□□□□□ -0.86
YPT11YNL304W SHC1P39000 512 aa9.7□□□□□ -0.86
YPT11YNL304W EPS1P40557 701 aa9.7□□□□□ -0.86
YPT11YNL304W YIR042CP40586 236 aa9.7□□□□□ -0.86
YPT11YNL304W KRI1P42846 591 aaKnown RBP9.7□□□□□ -0.86
YPT11YNL304W FAS2P19097 1887 aaKnown RBP9.69□□□□□ -0.86
YPT11YNL304W LCB1P25045 558 aaKnown RBP9.69□□□□□ -0.86
YPT11YNL304W MDL2P33311 773 aa9.69□□□□□ -0.86
YPT11YNL304W NPL4P33755 580 aa9.69□□□□□ -0.86
YPT11YNL304W YMR147WP40218 223 aaKnown RBP9.69□□□□□ -0.86
YPT11YNL304W HKR1P41809 1802 aa9.69□□□□□ -0.86
YPT11YNL304W YFH7P43591 353 aa9.69□□□□□ -0.86
YPT11YNL304W IRC8P47046 822 aa9.69□□□□□ -0.86
YPT11YNL304W PRP42Q03776 544 aaKnown RBP9.69□□□□□ -0.86
YPT11YNL304W RRG1Q12167 365 aaPredicted RBP9.69□□□□□ -0.86
YPT11YNL304W FIG2P25653 1609 aa9.68□□□□□ -0.86
YPT11YNL304W PTK1P36002 662 aaPredicted RBP9.68□□□□□ -0.86
YPT11YNL304W AAP1P37898 856 aaKnown RBP9.68□□□□□ -0.86
YPT11YNL304W BOI1P38041 980 aaKnown RBP9.68□□□□□ -0.86
YPT11YNL304W RRP8P38961 392 aaKnown RBP9.68□□□□□ -0.86
YPT11YNL304W YIR014WP40570 242 aa9.68□□□□□ -0.86
YPT11YNL304W GSM1P42950 618 aa9.68□□□□□ -0.86
YPT11YNL304W SQS1P53866 767 aaKnown RBP9.68□□□□□ -0.86
YPT11YNL304W SEN54Q02825 467 aaPredicted RBP9.68□□□□□ -0.86
YPT11YNL304W DPL1Q05567 589 aa9.68□□□□□ -0.86
YPT11YNL304W MSM1P22438 575 aa9.67□□□□□ -0.86
YPT11YNL304W RPT3P33298 428 aaKnown RBP9.67□□□□□ -0.86
YPT11YNL304W SIS2P36024 562 aa9.67□□□□□ -0.86
YPT11YNL304W HXT13P39924 564 aa9.67□□□□□ -0.86
YPT11YNL304W IOC3P43596 787 aa9.67□□□□□ -0.86
YPT11YNL304W PIB2P53191 635 aa9.67□□□□□ -0.86
YPT11YNL304W CRF1Q04930 467 aa9.67□□□□□ -0.86
YPT11YNL304W WRS1Q12109 432 aaKnown RBP9.67□□□□□ -0.86
YPT11YNL304W TAH18Q12181 623 aa9.67□□□□□ -0.86
YPT11YNL304W SSA1P10591 642 aaKnown RBP9.66□□□□□ -0.86
YPT11YNL304W SET4P42948 560 aa9.66□□□□□ -0.86
YPT11YNL304W PIP2P52960 996 aa9.66□□□□□ -0.86
YPT11YNL304W HXT17P53631 564 aa9.66□□□□□ -0.86
YPT11YNL304W ACK1Q07622 623 aaPredicted RBP9.66□□□□□ -0.86
YPT11YNL304W ARG82P07250 355 aa9.65□□□□□ -0.86
YPT11YNL304W RNR2P09938 399 aaKnown RBP9.65□□□□□ -0.86
YPT11YNL304W MET1P36150 593 aa9.65□□□□□ -0.86
YPT11YNL304W FPK1P53739 893 aa9.65□□□□□ -0.86
YPT11YNL304W SSF2Q12153 453 aaPredicted RBP9.65□□□□□ -0.86
YPT11YNL304W DIP2Q12220 943 aaPredicted RBP9.65□□□□□ -0.86
YPT11YNL304W GRX7P38068 203 aa9.64□□□□□ -0.87
YPT11YNL304W SLN1P39928 1220 aaPredicted RBP9.64□□□□□ -0.87
YPT11YNL304W APL6P46682 809 aa9.64□□□□□ -0.87
YPT11YNL304W BBC1P47068 1157 aa9.64□□□□□ -0.87
YPT11YNL304W TOS4Q06266 489 aa9.64□□□□□ -0.87
YPT11YNL304W ATG20Q07528 640 aa9.64□□□□□ -0.87
YPT11YNL304W AFG2P32794 780 aa9.63□□□□□ -0.87
YPT11YNL304W SLI15P38283 698 aa9.63□□□□□ -0.87
YPT11YNL304W SPO22P40511 975 aa9.63□□□□□ -0.87
YPT11YNL304W PUS6P53294 404 aa9.63□□□□□ -0.87
YPT11YNL304W RLF2Q12495 606 aa9.63□□□□□ -0.87
YPT11YNL304W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
YPT11YNL304W ESF1Q06344 628 aaKnown RBP9.62□□□□□ -0.87
YPT11YNL304W GAS5Q08193 484 aa9.62□□□□□ -0.87
YPT11YNL304W RPS7AP26786 190 aaKnown RBP9.61□□□□□ -0.87
YPT11YNL304W PKH3Q03306 898 aaPredicted RBP9.61□□□□□ -0.87
YPT11YNL304W KAR5Q04746 504 aa9.61□□□□□ -0.87
YPT11YNL304W MRD1Q06106 887 aaKnown RBP9.61□□□□□ -0.87
YPT11YNL304W LAM4P38800 1345 aa9.6□□□□□ -0.87
YPT11YNL304W CIC1P38779 376 aaKnown RBP9.6□□□□□ -0.87
YPT11YNL304W TRM44Q02648 567 aaKnown RBP9.6□□□□□ -0.87
YPT11YNL304W SRS2P12954 1174 aa9.59□□□□□ -0.87
YPT11YNL304W IMP2'P32351 346 aa9.59□□□□□ -0.87
YPT11YNL304W ARP5P53946 755 aa9.59□□□□□ -0.87
YPT11YNL304W SPN1Q06505 410 aaPredicted RBP9.59□□□□□ -0.87
YPT11YNL304W YPL260WQ08977 551 aa9.59□□□□□ -0.87
YPT11YNL304W AIM7Q12156 149 aa9.59□□□□□ -0.87
YPT11YNL304W SNF3P10870 884 aa9.58□□□□□ -0.88
YPT11YNL304W PCT1P13259 424 aa9.58□□□□□ -0.88
YPT11YNL304W PEP3P27801 918 aa9.58□□□□□ -0.88
YPT11YNL304W CRG1P38892 291 aaRIP-Chip data9.58□□□□□ -0.88not detected
YPT11YNL304W RTS1P38903 757 aa9.58□□□□□ -0.88
YPT11YNL304W TIM50Q02776 476 aa9.58□□□□□ -0.88
YPT11YNL304W AAD16Q02895 342 aa9.58□□□□□ -0.88
YPT11YNL304W GLC3P32775 704 aa9.57□□□□□ -0.88
YPT11YNL304W UFD2P54860 961 aa9.57□□□□□ -0.88
YPT11YNL304W PPM2Q08282 695 aa9.57□□□□□ -0.88
YPT11YNL304W TRL1P09880 827 aaKnown RBP9.56□□□□□ -0.88
YPT11YNL304W COQ1P18900 473 aa9.56□□□□□ -0.88
YPT11YNL304W PGA3Q12746 312 aaKnown RBP9.56□□□□□ -0.88
YPT11YNL304W RTG2P32608 588 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 321.6 ms