RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	ASI1	P54074	624 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	FMP30	Q02883	468 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	CMS1	Q07897	291 aa	Known RBP	7.93	□□□□□ -1.14
MSB3	YNL293W	SAC3	P46674	1301 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	HEL1	P36113	551 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	SSZ1	P38788	538 aa	Known RBP	7.93	□□□□□ -1.14
MSB3	YNL293W	ZDS1	P50111	915 aa	Known RBP	7.93	□□□□□ -1.14
MSB3	YNL293W	MSN5	P52918	1224 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	MSH6	Q03834	1242 aa		7.93	□□□□□ -1.14
MSB3	YNL293W	PUF6	Q04373	656 aa	Known RBP	7.93	□□□□□ -1.14
MSB3	YNL293W	BDH2	P39713	417 aa		7.92	□□□□□ -1.14
MSB3	YNL293W	SMC6	Q12749	1114 aa		7.92	□□□□□ -1.14
MSB3	YNL293W	AUS1	Q08409	1394 aa		7.92	□□□□□ -1.14
MSB3	YNL293W	HMG1	P12683	1054 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	PET112	P33893	541 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	COY1	P34237	679 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	NMD3	P38861	518 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	ILV3	P39522	585 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	SDS3	P40505	327 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	MRX12	P47084	519 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	HST1	P53685	503 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	7.91	□□□□□ -1.14	not detected
MSB3	YNL293W	RSA3	Q05942	220 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	DNL4	Q08387	944 aa	Predicted RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	MSB4	Q12317	492 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	BPT1	P14772	1559 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	SUI2	P20459	304 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	GEF1	P37020	779 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	OSH3	P38713	996 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	MAD1	P40957	749 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	ALD4	P46367	519 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	RSM28	Q03430	361 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	SGT2	Q12118	346 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	HSP42	Q12329	375 aa		7.91	□□□□□ -1.14
MSB3	YNL293W	HAA1	Q12753	694 aa	Known RBP	7.91	□□□□□ -1.14
MSB3	YNL293W	VPS35	P34110	944 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	LHS1	P36016	881 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	SPC72	P39723	622 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	MET18	P40469	1032 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	RSM25	P40496	264 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	CTK3	P46963	296 aa	Predicted RBP	7.9	□□□□□ -1.14
MSB3	YNL293W	REX2	P54964	269 aa	Known RBP	7.9	□□□□□ -1.14
MSB3	YNL293W	ITT1	Q04638	464 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	PCL8	Q08966	492 aa		7.9	□□□□□ -1.14
MSB3	YNL293W	SEC15	P22224	910 aa		7.9	□□□□□ -1.15
MSB3	YNL293W	UGA3	P26370	528 aa		7.9	□□□□□ -1.15
MSB3	YNL293W	SWC3	P31376	625 aa		7.9	□□□□□ -1.15
MSB3	YNL293W	ARC19	P33204	171 aa	Known RBP	7.9	□□□□□ -1.15
MSB3	YNL293W	MRPL10	P36520	322 aa		7.9	□□□□□ -1.15
MSB3	YNL293W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.9	□□□□□ -1.15	not detected
MSB3	YNL293W	AVO1	Q08236	1176 aa		7.9	□□□□□ -1.15
MSB3	YNL293W	HMI1	Q12039	706 aa		7.9	□□□□□ -1.15
MSB3	YNL293W	PET494	P07390	489 aa	Predicted RBP	7.89	□□□□□ -1.15
MSB3	YNL293W	PDR1	P12383	1068 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	PEX5	P35056	612 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	SRL3	P36167	246 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	TBS1	P38114	1094 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	RGD1	P38339	666 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	VID28	P40547	921 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	VPS20	Q04272	221 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	TY4A-H	Q6Q5P6	413 aa		7.89	□□□□□ -1.15
MSB3	YNL293W	SWI1	P09547	1314 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	SUI3	P09064	285 aa	Known RBP	7.88	□□□□□ -1.15
MSB3	YNL293W	CPS1	P27614	576 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	KEL2	P50090	882 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	CUS1	Q02554	436 aa	Predicted RBP	7.88	□□□□□ -1.15
MSB3	YNL293W	FUS2	Q05670	677 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	SSQ1	Q05931	657 aa	Predicted RBP	7.88	□□□□□ -1.15
MSB3	YNL293W	MMR1	Q06324	491 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	YPR097W	Q06839	1073 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	ABP140	Q08641	628 aa	Known RBP	7.88	□□□□□ -1.15
MSB3	YNL293W	APC5	Q08683	685 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	TRS33	Q99394	268 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	GGA2	P38817	585 aa	Known RBP	7.88	□□□□□ -1.15
MSB3	YNL293W	UBP12	P39538	1254 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	LSC1	P53598	329 aa	Known RBP	7.88	□□□□□ -1.15
MSB3	YNL293W	RKM4	Q12504	494 aa		7.88	□□□□□ -1.15
MSB3	YNL293W	YCF1	P39109	1515 aa	Known RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	POL1	P13382	1468 aa		7.87	□□□□□ -1.15
MSB3	YNL293W	CAT8	P39113	1433 aa		7.87	□□□□□ -1.15
MSB3	YNL293W	PRT1	P06103	763 aa	Known RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	KRS1	P15180	591 aa	Known RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	CDC60	P26637	1090 aa	Known RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	MRF1	P30775	413 aa	Predicted RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	STE5	P32917	917 aa		7.87	□□□□□ -1.15
MSB3	YNL293W	ECM4	P36156	370 aa		7.87	□□□□□ -1.15
MSB3	YNL293W	HSM3	P38348	480 aa		7.87	□□□□□ -1.15
MSB3	YNL293W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.87	□□□□□ -1.15	not detected
MSB3	YNL293W	PRP43	P53131	767 aa	Known RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	GIR2	Q03768	265 aa	Predicted RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	SPN1	Q06505	410 aa	Predicted RBP	7.87	□□□□□ -1.15
MSB3	YNL293W	CMP2	P14747	604 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	RPN2	P32565	945 aa	Known RBP	7.86	□□□□□ -1.15
MSB3	YNL293W	CIC1	P38779	376 aa	Known RBP	7.86	□□□□□ -1.15
MSB3	YNL293W	MAM1	P40065	302 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	YML108W	Q03759	105 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	PLP1	Q04004	230 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	VAM6	Q07468	1049 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	MET7	Q08645	548 aa		7.86	□□□□□ -1.15
MSB3	YNL293W	CEX1	Q12453	761 aa		7.86	□□□□□ -1.15

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms