RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	SCW11	P53189	542 aa		5.65	□□□□□ -1.5
TPM1	YNL079C	LDH1	P38139	375 aa		5.64	□□□□□ -1.51
TPM1	YNL079C	SUT1	P53032	299 aa	Known RBP	5.64	□□□□□ -1.51
TPM1	YNL079C	MTO1	P53070	669 aa		5.64	□□□□□ -1.51
TPM1	YNL079C	MSC6	Q08818	692 aa	Known RBP	5.64	□□□□□ -1.51
TPM1	YNL079C	DYS1	P38791	387 aa		5.63	□□□□□ -1.51
TPM1	YNL079C	IPL1	P38991	367 aa		5.63	□□□□□ -1.51
TPM1	YNL079C	NAM8	Q00539	523 aa	Known RBP	5.63	□□□□□ -1.51
TPM1	YNL079C	NUT2	Q06213	157 aa		5.63	□□□□□ -1.51
TPM1	YNL079C	FRT1	Q99332	602 aa		5.63	□□□□□ -1.51
TPM1	YNL079C	RPC31	P17890	251 aa		5.62	□□□□□ -1.51
TPM1	YNL079C	SEC20	P28791	383 aa		5.62	□□□□□ -1.51
TPM1	YNL079C	HXT8	P40886	569 aa		5.62	□□□□□ -1.51
TPM1	YNL079C	TRS120	Q04183	1289 aa		5.62	□□□□□ -1.51
TPM1	YNL079C	RGP1	P16664	663 aa		5.61	□□□□□ -1.51
TPM1	YNL079C	MSN1	P22148	382 aa		5.61	□□□□□ -1.51
TPM1	YNL079C	HEM3	P28789	327 aa		5.61	□□□□□ -1.51
TPM1	YNL079C	HSL1	P34244	1518 aa		5.6	□□□□□ -1.51
TPM1	YNL079C	PPX1	P38698	397 aa		5.6	□□□□□ -1.51
TPM1	YNL079C	SKP1	P52286	194 aa		5.6	□□□□□ -1.51
TPM1	YNL079C	UFD2	P54860	961 aa		5.6	□□□□□ -1.51
TPM1	YNL079C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
TPM1	YNL079C	SMC1	P32908	1225 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	MRPL16	P38064	232 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	ACO2	P39533	789 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	ROG3	P43602	733 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	TY1A-MR1	Q04215	440 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	YOR296W	Q08748	1289 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	MNL2	Q12205	849 aa		5.59	□□□□□ -1.51
TPM1	YNL079C	SPT6	P23615	1451 aa	Known RBP	5.58	□□□□□ -1.52
TPM1	YNL079C	ISW1	P38144	1129 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	GIP1	P38229	639 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	BSD2	P38356	321 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	FIR1	P40020	876 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	CUS1	Q02554	436 aa	Predicted RBP	5.58	□□□□□ -1.52
TPM1	YNL079C	GPI13	Q07830	1017 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	WHI5	Q12416	295 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	STB3	Q12427	513 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	SWR1	Q05471	1514 aa		5.58	□□□□□ -1.52
TPM1	YNL079C	NTA1	P40354	457 aa		5.57	□□□□□ -1.52
TPM1	YNL079C	RGD2	P43556	714 aa		5.57	□□□□□ -1.52
TPM1	YNL079C	CCP1	P00431	361 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	DIT1	P21623	536 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	GAR1	P28007	205 aa	Known RBP	5.56	□□□□□ -1.52
TPM1	YNL079C	RAD55	P38953	406 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	YIR007W	P40566	764 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	CUZ1	P53899	274 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	YNL011C	P53980	444 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	RSC4	Q02206	625 aa		5.56	□□□□□ -1.52
TPM1	YNL079C	APM2	P38700	605 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	THI12	P42883	340 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	THI5	P43534	340 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	THI11	P47183	340 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	YNR040W	P53736	256 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	CAF120	P53836	1060 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	YMR265C	Q03508	461 aa	Known RBP	5.55	□□□□□ -1.52
TPM1	YNL079C	THI13	Q07748	340 aa		5.55	□□□□□ -1.52
TPM1	YNL079C	RPP1A	P05318	106 aa	Predicted RBP	5.54	□□□□□ -1.52
TPM1	YNL079C	MET4	P32389	672 aa		5.54	□□□□□ -1.52
TPM1	YNL079C	YBR287W	P38355	427 aa		5.54	□□□□□ -1.52
TPM1	YNL079C	PSY2	P40164	858 aa		5.54	□□□□□ -1.52
TPM1	YNL079C	ITC1	P53125	1264 aa		5.54	□□□□□ -1.52
TPM1	YNL079C	CDC55	Q00362	526 aa		5.54	□□□□□ -1.52
TPM1	YNL079C	TIF6	Q12522	245 aa	Known RBP	5.54	□□□□□ -1.52
TPM1	YNL079C	IRS4	P36115	615 aa	Known RBP	5.53	□□□□□ -1.52
TPM1	YNL079C	NCL1	P38205	684 aa	Known RBP	5.53	□□□□□ -1.52
TPM1	YNL079C	KRE33	P53914	1056 aa	Known RBP	5.53	□□□□□ -1.52
TPM1	YNL079C	EMG1	Q06287	252 aa	Known RBP	5.53	□□□□□ -1.52
TPM1	YNL079C	YDL176W	Q12027	708 aa		5.53	□□□□□ -1.52
TPM1	YNL079C	AIM46	P38885	310 aa		5.52	□□□□□ -1.53
TPM1	YNL079C	YDR461C-A	Q2V2P7	80 aa		5.52	□□□□□ -1.53
TPM1	YNL079C	PHO4	P07270	312 aa	Known RBP	5.51	□□□□□ -1.53
TPM1	YNL079C	ATE1	P16639	503 aa		5.51	□□□□□ -1.53
TPM1	YNL079C	FPS1	P23900	669 aa		5.51	□□□□□ -1.53
TPM1	YNL079C	MSC7	P38694	644 aa		5.51	□□□□□ -1.53
TPM1	YNL079C	YIL165C	P40446	119 aa		5.51	□□□□□ -1.53
TPM1	YNL079C	POL32	P47110	350 aa		5.51	□□□□□ -1.53
TPM1	YNL079C	RRP15	Q06511	250 aa	Predicted RBP	5.51	□□□□□ -1.53
TPM1	YNL079C	ASF1	P32447	279 aa		5.5	□□□□□ -1.53
TPM1	YNL079C	CEM1	P39525	442 aa		5.5	□□□□□ -1.53
TPM1	YNL079C	ADE12	P80210	433 aa	Known RBP	5.5	□□□□□ -1.53
TPM1	YNL079C	HEH2	Q03281	663 aa		5.5	□□□□□ -1.53
TPM1	YNL079C	BSC2	Q05611	235 aa		5.5	□□□□□ -1.53
TPM1	YNL079C	SYT1	Q06836	1226 aa		5.5	□□□□□ -1.53
TPM1	YNL079C	HIR3	P47171	1648 aa		5.49	□□□□□ -1.53
TPM1	YNL079C	YER156C	P40093	338 aa	Known RBP	5.49	□□□□□ -1.53
TPM1	YNL079C	IDI1	P15496	288 aa		5.48	□□□□□ -1.53
TPM1	YNL079C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.48	□□□□□ -1.53	not detected
TPM1	YNL079C	SAM37	P50110	327 aa		5.48	□□□□□ -1.53
TPM1	YNL079C	GCD6	P32501	712 aa	Known RBP	5.47	□□□□□ -1.53
TPM1	YNL079C	VPS35	P34110	944 aa		5.47	□□□□□ -1.53
TPM1	YNL079C	DAK2	P43550	591 aa		5.47	□□□□□ -1.53
TPM1	YNL079C	LYS5	P50113	272 aa		5.47	□□□□□ -1.53
TPM1	YNL079C	CTR9	P89105	1077 aa		5.47	□□□□□ -1.53
TPM1	YNL079C	TY1A-DR2	Q03964	440 aa	Known RBP	5.47	□□□□□ -1.53
TPM1	YNL079C	NOC3	Q07896	663 aa	Predicted RBP	5.47	□□□□□ -1.53
TPM1	YNL079C	MGE1	P38523	228 aa		5.46	□□□□□ -1.54
TPM1	YNL079C	XRN1	P22147	1528 aa	Known RBP	5.46	□□□□□ -1.54
TPM1	YNL079C	FLP1	P03870	423 aa		5.45	□□□□□ -1.54
TPM1	YNL079C	YHL008C	P38750	627 aa		5.45	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 163.9 ms