RNA–Protein interactions for RNA: YLR129W

DIP2, Transcript of Nucleolar protein, yeast

Gene DIP2, Length 2,832 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DIP2	YLR129W	COG4	Q06096	861 aa		4.65	□□□□□ -1.67
DIP2	YLR129W	WHI5	Q12416	295 aa		4.65	□□□□□ -1.67
DIP2	YLR129W	NKP1	Q12493	238 aa		4.65	□□□□□ -1.67
DIP2	YLR129W	SWI6	P09959	803 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	KAR3	P17119	729 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	SPE2	P21182	396 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	PUP1	P25043	261 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	TAT2	P38967	592 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	YIL055C	P40523	627 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	KEL2	P50090	882 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	NSE3	Q05541	303 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	HEL2	Q05580	639 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	BCK1	Q01389	1478 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	TIF1	P10081	395 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	TYS1	P36421	394 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	NOC2	P39744	710 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	IES2	P40154	320 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	RRP46	P53256	223 aa	Predicted RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	NFI1	Q12216	726 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	HSP42	Q12329	375 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	RAV1	P47104	1357 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	MAL31	P38156	614 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	RCR1	P38212	213 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	PRP43	P53131	767 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	VPS30	Q02948	557 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	YLR257W	Q06146	321 aa	Known RBP	4.64	□□□□□ -1.67
DIP2	YLR129W	HAT1	Q12341	374 aa		4.64	□□□□□ -1.67
DIP2	YLR129W	TAF1	P46677	1066 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	HOS2	P53096	452 aa	Predicted RBP	4.63	□□□□□ -1.67
DIP2	YLR129W	HAP5	Q02516	242 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	PUF6	Q04373	656 aa	Known RBP	4.63	□□□□□ -1.67
DIP2	YLR129W	SGT2	Q12118	346 aa	Known RBP	4.63	□□□□□ -1.67
DIP2	YLR129W	PDR11	P40550	1411 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	MCM2	P29469	868 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	TPD3	P31383	635 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	NPL4	P33755	580 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	IES5	P40060	125 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	FKH1	P40466	484 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	ATG1	P53104	897 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	ERP4	Q12450	207 aa		4.63	□□□□□ -1.67
DIP2	YLR129W	TRL1	P09880	827 aa	Known RBP	4.62	□□□□□ -1.67
DIP2	YLR129W	YKR023W	P36119	530 aa	Known RBP	4.62	□□□□□ -1.67
DIP2	YLR129W	RTR1	P40084	226 aa	Predicted RBP	4.62	□□□□□ -1.67
DIP2	YLR129W	HGH1	P48362	394 aa	Known RBP	4.62	□□□□□ -1.67
DIP2	YLR129W	BNI5	P53890	448 aa	Known RBP	4.62	□□□□□ -1.67
DIP2	YLR129W	NDL1	Q06568	189 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	SRS2	P12954	1174 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	CLB5	P30283	435 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	HXT5	P38695	592 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	UBP12	P39538	1254 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	YJL007C	P47080	104 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	TCB1	Q12466	1186 aa		4.62	□□□□□ -1.67
DIP2	YLR129W	SUP35	P05453	685 aa	Known RBP	4.61	□□□□□ -1.67
DIP2	YLR129W	OPI1	P21957	404 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	KTR1	P27810	393 aa	Known RBP	4.61	□□□□□ -1.67
DIP2	YLR129W	SEC6	P32844	805 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	RTF1	P53064	558 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	PXR1	P53335	271 aa	Predicted RBP	4.61	□□□□□ -1.67
DIP2	YLR129W	VTC3	Q02725	835 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	TY4A-H	Q6Q5P6	413 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	PIF1	P07271	859 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	SCT1	P32784	759 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	CSE4	P36012	229 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	DSN1	P40568	576 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
DIP2	YLR129W	RPN4	Q03465	531 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	ARR1	Q06596	294 aa		4.61	□□□□□ -1.67
DIP2	YLR129W	STE5	P32917	917 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	RPC37	P36121	282 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	RRT14	P40470	206 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	YJR142W	P47173	342 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	JJJ1	P53863	590 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	YNL058C	P53947	316 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	RRB1	Q04225	511 aa	Known RBP	4.6	□□□□□ -1.67
DIP2	YLR129W	JIP5	Q06214	492 aa	Predicted RBP	4.6	□□□□□ -1.67
DIP2	YLR129W	ESC2	Q06340	456 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	THI22	Q06490	572 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	PSR1	Q07800	427 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	THS1	P04801	734 aa	Known RBP	4.6	□□□□□ -1.67
DIP2	YLR129W	PSO2	P30620	661 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	PET100	P38958	111 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	RSM7	P47150	247 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	OYE2	Q03558	400 aa	Known RBP	4.6	□□□□□ -1.67
DIP2	YLR129W	YMR074C	Q04773	145 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	MAK21	Q12176	1025 aa	Known RBP	4.6	□□□□□ -1.67
DIP2	YLR129W	YRM1	Q12340	786 aa		4.6	□□□□□ -1.67
DIP2	YLR129W	CIR1	P42940	261 aa		4.59	□□□□□ -1.67
DIP2	YLR129W	PPM2	Q08282	695 aa		4.59	□□□□□ -1.67
DIP2	YLR129W	PCL8	Q08966	492 aa		4.59	□□□□□ -1.67
DIP2	YLR129W	CDC31	P06704	161 aa	Known RBP	4.59	□□□□□ -1.67
DIP2	YLR129W	TFG1	P41895	735 aa	Predicted RBP	4.59	□□□□□ -1.67
DIP2	YLR129W	HOS3	Q02959	697 aa	Known RBP	4.59	□□□□□ -1.67
DIP2	YLR129W	ORM2	Q06144	216 aa		4.59	□□□□□ -1.67
DIP2	YLR129W	MLP1	Q02455	1875 aa	Known RBP	4.59	□□□□□ -1.67
DIP2	YLR129W	PRD1	P25375	712 aa		4.59	□□□□□ -1.68
DIP2	YLR129W	CIN4	P39110	191 aa		4.59	□□□□□ -1.68
DIP2	YLR129W	HEF3	P53978	1044 aa	Known RBP	4.59	□□□□□ -1.68
DIP2	YLR129W	APC5	Q08683	685 aa		4.59	□□□□□ -1.68
DIP2	YLR129W	MSC6	Q08818	692 aa	Known RBP	4.59	□□□□□ -1.68
DIP2	YLR129W	MIC60	P36112	540 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 41 ms