RNA–Protein interactions for RNA: YKL165C

MCD4, Transcript of Protein involved in GPI anchor synthesis, yeast

Gene MCD4, Length 2,760 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCD4	YKL165C	RUD3	Q12234	484 aa	Known RBP	4.39	□□□□□ -1.71
MCD4	YKL165C	YBL113C	Q7M4S9	792 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	TRL1	P09880	827 aa	Known RBP	4.39	□□□□□ -1.71
MCD4	YKL165C	SEC23	P15303	768 aa	Known RBP	4.39	□□□□□ -1.71
MCD4	YKL165C	ARC19	P33204	171 aa	Known RBP	4.39	□□□□□ -1.71
MCD4	YKL165C	SAP190	P36123	1033 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	BOI1	P38041	980 aa	Known RBP	4.39	□□□□□ -1.71
MCD4	YKL165C	RRF1	P38771	230 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	YAP1801	P38856	637 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	SNF7	P39929	240 aa	Known RBP	4.39	□□□□□ -1.71
MCD4	YKL165C	RTT105	P40063	208 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	PEX21	P50091	288 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	FPK1	P53739	893 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	RNH1	Q04740	348 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	PPM2	Q08282	695 aa		4.39	□□□□□ -1.71
MCD4	YKL165C	DEP1	P31385	405 aa		4.38	□□□□□ -1.71
MCD4	YKL165C	ARB1	P40024	610 aa	Known RBP	4.38	□□□□□ -1.71
MCD4	YKL165C	DAK2	P43550	591 aa		4.38	□□□□□ -1.71
MCD4	YKL165C	CTR9	P89105	1077 aa		4.38	□□□□□ -1.71
MCD4	YKL165C	YDR286C	Q05530	114 aa		4.38	□□□□□ -1.71
MCD4	YKL165C	ARV1	Q06541	321 aa		4.38	□□□□□ -1.71
MCD4	YKL165C	BDF2	Q07442	638 aa		4.38	□□□□□ -1.71
MCD4	YKL165C	BMS1	Q08965	1183 aa	Known RBP	4.38	□□□□□ -1.71
MCD4	YKL165C	APN1	P22936	367 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	PEP12	P32854	288 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	PEX6	P33760	1030 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	SAS3	P34218	831 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	RRP8	P38961	392 aa	Known RBP	4.37	□□□□□ -1.71
MCD4	YKL165C	MXR1	P40029	184 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	YJR107W	P47145	328 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	ALD6	P54115	500 aa	Known RBP	4.37	□□□□□ -1.71
MCD4	YKL165C	YGR161W-C	Q3E744	92 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	TUF1	P02992	437 aa	Known RBP	4.37	□□□□□ -1.71
MCD4	YKL165C	CDC31	P06704	161 aa	Known RBP	4.37	□□□□□ -1.71
MCD4	YKL165C	RAD4	P14736	754 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	NIP100	P33420	868 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	MEF2	P39677	819 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	RIA1	P53893	1110 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	JIP4	Q03361	876 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	RPN7	Q06103	429 aa	Known RBP	4.37	□□□□□ -1.71
MCD4	YKL165C	RTP1	Q12751	981 aa		4.37	□□□□□ -1.71
MCD4	YKL165C	HTA1	P04911	132 aa	Known RBP	4.36	□□□□□ -1.71
MCD4	YKL165C	HTA2	P04912	132 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	PET111	P08468	800 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	DOT6	P40059	670 aa	Known RBP	4.36	□□□□□ -1.71
MCD4	YKL165C	TGL2	P54857	326 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	CLP1	Q08685	445 aa	Predicted RBP	4.36	□□□□□ -1.71
MCD4	YKL165C	MNL2	Q12205	849 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	KIP2	P28743	706 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	YKL222C	P35995	705 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	APL2	P36000	726 aa	Predicted RBP	4.36	□□□□□ -1.71
MCD4	YKL165C	DCW1	P36091	449 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	CAJ1	P39101	391 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	RIC1	P40395	1056 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	MDJ2	P42834	146 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	VID30	P53076	958 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	SPO20	Q04359	397 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	GGA1	Q06336	557 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	YPR204W	Q08995	1032 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	SAC3	P46674	1301 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	ACP1	P32463	125 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	GYP7	P48365	746 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	CWH41	P53008	833 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	MTO1	P53070	669 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
MCD4	YKL165C	RRP36	Q12481	300 aa	Predicted RBP	4.36	□□□□□ -1.71
MCD4	YKL165C	YOL087C	Q99247	1116 aa		4.36	□□□□□ -1.71
MCD4	YKL165C	MRC1	P25588	1096 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	KTR1	P27810	393 aa	Known RBP	4.35	□□□□□ -1.71
MCD4	YKL165C	YHL050C	P38721	697 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	YHR219W	P38900	624 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	NDE1	P40215	560 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	SLX4	Q12098	748 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	YEL077C	Q3E7X8	1277 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	FRT1	Q99332	602 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	MCM2	P29469	868 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	SWC3	P31376	625 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	VPH1	P32563	840 aa	Known RBP	4.35	□□□□□ -1.71
MCD4	YKL165C	IME2	P32581	645 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	IRR1	P40541	1150 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	VTC4	P47075	721 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	DAN4	P47179	1161 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	PGC1	Q08959	321 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	TRS33	Q99394	268 aa		4.35	□□□□□ -1.71
MCD4	YKL165C	MRPL25	P23369	157 aa		4.34	□□□□□ -1.71
MCD4	YKL165C	CCT3	P39077	534 aa	Known RBP	4.34	□□□□□ -1.71
MCD4	YKL165C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
MCD4	YKL165C	RRB1	Q04225	511 aa	Known RBP	4.34	□□□□□ -1.71
MCD4	YKL165C	TCB1	Q12466	1186 aa		4.34	□□□□□ -1.71
MCD4	YKL165C	MTC2	P34246	357 aa		4.34	□□□□□ -1.72
MCD4	YKL165C	RRN3	P36070	627 aa		4.34	□□□□□ -1.72
MCD4	YKL165C	ALF1	P53904	254 aa		4.34	□□□□□ -1.72
MCD4	YKL165C	VPS16	Q03308	798 aa		4.34	□□□□□ -1.72
MCD4	YKL165C	PCL8	Q08966	492 aa		4.34	□□□□□ -1.72
MCD4	YKL165C	PIN2	Q12057	282 aa		4.34	□□□□□ -1.72
MCD4	YKL165C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
MCD4	YKL165C	DPB3	P27344	201 aa		4.33	□□□□□ -1.72
MCD4	YKL165C	RME1	P32338	300 aa	Known RBP	4.33	□□□□□ -1.72
MCD4	YKL165C	LAM1	P38851	1228 aa		4.33	□□□□□ -1.72
MCD4	YKL165C	FYV10	P40492	516 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms