RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	TY4A-H	Q6Q5P6	413 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	VMA4	P22203	233 aa	Known RBP	5.23	□□□□□ -1.57
PAN1	YIR006C	SPO22	P40511	975 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	YSP2	Q06681	1438 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	NIP100	P33420	868 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	ECM21	P38167	1117 aa	Known RBP	5.23	□□□□□ -1.57
PAN1	YIR006C	HXT17	P53631	564 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	EIS1	Q05050	843 aa	Known RBP	5.23	□□□□□ -1.57
PAN1	YIR006C	IRC3	Q06683	689 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	YOL057W	Q08225	711 aa		5.23	□□□□□ -1.57
PAN1	YIR006C	SLA1	P32790	1244 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	UBC6	P33296	250 aa	Predicted RBP	5.22	□□□□□ -1.57
PAN1	YIR006C	BYE1	P36106	594 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	CSM3	Q04659	317 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	MSB4	Q12317	492 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	ZRT2	Q12436	422 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	OSH2	Q12451	1283 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	YOR093C	Q12275	1648 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	SSE1	P32589	693 aa	Known RBP	5.22	□□□□□ -1.57
PAN1	YIR006C	BDH2	P39713	417 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	NPA3	P47122	385 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	SNF2	P22082	1703 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	MRC1	P25588	1096 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	DPB3	P27344	201 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	NFU1	P32860	256 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	MDL2	P33311	773 aa		5.22	□□□□□ -1.57
PAN1	YIR006C	TIF4632	P39936	914 aa	Known RBP	5.22	□□□□□ -1.57
PAN1	YIR006C	SDA1	P53313	767 aa	Known RBP	5.22	□□□□□ -1.57
PAN1	YIR006C	GIR2	Q03768	265 aa	Predicted RBP	5.22	□□□□□ -1.57
PAN1	YIR006C	APL5	Q08951	932 aa	Known RBP	5.22	□□□□□ -1.57
PAN1	YIR006C	CDC25	P04821	1589 aa		5.21	□□□□□ -1.57
PAN1	YIR006C	SMC1	P32908	1225 aa		5.21	□□□□□ -1.58
PAN1	YIR006C	RKM3	P38222	552 aa		5.21	□□□□□ -1.58
PAN1	YIR006C	UTP5	Q04177	643 aa	Known RBP	5.21	□□□□□ -1.58
PAN1	YIR006C	RRB1	Q04225	511 aa	Known RBP	5.21	□□□□□ -1.58
PAN1	YIR006C	RIM20	Q12033	661 aa		5.21	□□□□□ -1.58
PAN1	YIR006C	OSH3	P38713	996 aa	Known RBP	5.21	□□□□□ -1.58
PAN1	YIR006C	CEF1	Q03654	590 aa	Predicted RBP	5.21	□□□□□ -1.58
PAN1	YIR006C	ELG1	Q12050	791 aa		5.21	□□□□□ -1.58
PAN1	YIR006C	SAP1	P39955	897 aa	Known RBP	5.21	□□□□□ -1.58
PAN1	YIR006C	BUD3	P25558	1636 aa		5.21	□□□□□ -1.58
PAN1	YIR006C	SPT5	P27692	1063 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	NUG1	P40010	520 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	HAP1	P0CE41	1502 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	HEM3	P28789	327 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	RPC37	P36121	282 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	YHL017W	P38745	532 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	RPO21	P04050	1733 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	DOP1	Q03921	1698 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	KTR1	P27810	393 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	HEF3	P53978	1044 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	JNM1	P36224	373 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	YER130C	P39959	443 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	SEC27	P41811	889 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	CTH1	P47976	325 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	EST2	Q06163	884 aa		5.2	□□□□□ -1.58
PAN1	YIR006C	NOP14	Q99207	810 aa	Known RBP	5.2	□□□□□ -1.58
PAN1	YIR006C	TUF1	P02992	437 aa	Known RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	MET1	P36150	593 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	AIM9	P40053	627 aa	Known RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	MSH4	P40965	878 aa	Predicted RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	CEP3	P40969	608 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	RRP46	P53256	223 aa	Predicted RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	UBP10	P53874	792 aa	Predicted RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	SAS4	Q04003	481 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	ATG9	Q12142	997 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	CDC8	P00572	216 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	MTF2	P10849	440 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	SEG2	P34250	1132 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	CIR1	P42940	261 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	SNU71	P53207	620 aa	Known RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	PGA3	Q12746	312 aa	Known RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	SPO14	P36126	1683 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	RPS19A	P07280	144 aa	Known RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	RPS19B	P07281	144 aa	Predicted RBP	5.19	□□□□□ -1.58
PAN1	YIR006C	DIT2	P21595	489 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	PIP2	P52960	996 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	VHS3	Q08438	674 aa		5.19	□□□□□ -1.58
PAN1	YIR006C	PEP3	P27801	918 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	NGR1	P32831	672 aa	Known RBP	5.18	□□□□□ -1.58
PAN1	YIR006C	VPS8	P39702	1274 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	YMR147W	P40218	223 aa	Known RBP	5.18	□□□□□ -1.58
PAN1	YIR006C	EPL1	P43572	832 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	FRS2	P15625	503 aa	Known RBP	5.18	□□□□□ -1.58
PAN1	YIR006C	NPR3	P38742	1146 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	YGL242C	P53066	181 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	ZDS2	P54786	942 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	SIR4	P11978	1358 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	UBP1	P25037	809 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	KNS1	P32350	737 aa	Predicted RBP	5.18	□□□□□ -1.58
PAN1	YIR006C	BOI2	P39969	1040 aa		5.18	□□□□□ -1.58
PAN1	YIR006C	RAD1	P06777	1100 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	SWE1	P32944	819 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	IRC8	P47046	822 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	MTC5	Q03897	1148 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	SMC6	Q12749	1114 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	MET5	P47169	1442 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	CIT1	P00890	479 aa		5.17	□□□□□ -1.58
PAN1	YIR006C	DEF1	P35732	738 aa	Known RBP	5.17	□□□□□ -1.58
PAN1	YIR006C	THI12	P42883	340 aa		5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms