RNA–Protein interactions for RNA: YHR152W

SPO12, Transcript of Nucleolar protein of unknown function, yeastyeast

Gene SPO12, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO12YHR152W IRE1P32361 1115 aa7.89□□□□□ -1.15
SPO12YHR152W SLA1P32790 1244 aa7.89□□□□□ -1.15
SPO12YHR152W AHP1P38013 176 aaKnown RBP7.89□□□□□ -1.15
SPO12YHR152W YTA6P40328 754 aa7.89□□□□□ -1.15
SPO12YHR152W SVF1Q05515 481 aa7.89□□□□□ -1.15
SPO12YHR152W DAL1P32375 460 aa7.88□□□□□ -1.15
SPO12YHR152W KAP122P32767 1081 aa7.88□□□□□ -1.15
SPO12YHR152W VTC4P47075 721 aa7.88□□□□□ -1.15
SPO12YHR152W RSC4Q02206 625 aa7.88□□□□□ -1.15
SPO12YHR152W TY1A-DR3Q12441 440 aa7.88□□□□□ -1.15
SPO12YHR152W MSN1P22148 382 aa7.87□□□□□ -1.15
SPO12YHR152W GCD6P32501 712 aaKnown RBP7.87□□□□□ -1.15
SPO12YHR152W NUP85P46673 744 aa7.87□□□□□ -1.15
SPO12YHR152W YJR098CP47139 656 aa7.87□□□□□ -1.15
SPO12YHR152W MET1P36150 593 aa7.86□□□□□ -1.15
SPO12YHR152W RAD55P38953 406 aa7.86□□□□□ -1.15
SPO12YHR152W NTA1P40354 457 aa7.86□□□□□ -1.15
SPO12YHR152W FYV10P40492 516 aa7.86□□□□□ -1.15
SPO12YHR152W DAK2P43550 591 aa7.86□□□□□ -1.15
SPO12YHR152W RGD2P43556 714 aa7.86□□□□□ -1.15
SPO12YHR152W SAM37P50110 327 aa7.86□□□□□ -1.15
SPO12YHR152W PDC6P26263 563 aaKnown RBP7.85□□□□□ -1.15
SPO12YHR152W RPT1P33299 467 aaKnown RBP7.85□□□□□ -1.15
SPO12YHR152W VPS35P34110 944 aa7.85□□□□□ -1.15
SPO12YHR152W FIR1P40020 876 aa7.85□□□□□ -1.15
SPO12YHR152W LSC2P53312 427 aa7.85□□□□□ -1.15
SPO12YHR152W PSH1Q12161 406 aa7.85□□□□□ -1.15
SPO12YHR152W RPC31P17890 251 aa7.84□□□□□ -1.15
SPO12YHR152W RGA1P39083 1007 aa7.84□□□□□ -1.15
SPO12YHR152W MTO1P53070 669 aa7.84□□□□□ -1.15
SPO12YHR152W ORC1P54784 914 aaPredicted RBP7.84□□□□□ -1.15
SPO12YHR152W LEU1P07264 779 aaKnown RBP7.83□□□□□ -1.16
SPO12YHR152W MCM2P29469 868 aa7.82□□□□□ -1.16
SPO12YHR152W IRS4P36115 615 aaKnown RBP7.82□□□□□ -1.16
SPO12YHR152W ISW1P38144 1129 aa7.82□□□□□ -1.16
SPO12YHR152W GIP1P38229 639 aa7.82□□□□□ -1.16
SPO12YHR152W PSY2P40164 858 aa7.82□□□□□ -1.16
SPO12YHR152W BSC2Q05611 235 aa7.82□□□□□ -1.16
SPO12YHR152W YOR296WQ08748 1289 aa7.82□□□□□ -1.16
SPO12YHR152W TIF6Q12522 245 aaKnown RBP7.82□□□□□ -1.16
SPO12YHR152W BSD2P38356 321 aa7.81□□□□□ -1.16
SPO12YHR152W CIC1P38779 376 aaKnown RBP7.81□□□□□ -1.16
SPO12YHR152W NOC3Q07896 663 aaPredicted RBP7.81□□□□□ -1.16
SPO12YHR152W NAB2P32505 525 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
SPO12YHR152W YBR287WP38355 427 aa7.8□□□□□ -1.16
SPO12YHR152W TCB1Q12466 1186 aa7.8□□□□□ -1.16
SPO12YHR152W SPR28Q04921 423 aa7.79□□□□□ -1.16
SPO12YHR152W UBP15P50101 1230 aa7.78□□□□□ -1.16
SPO12YHR152W SKP1P52286 194 aa7.78□□□□□ -1.16
SPO12YHR152W CUS1Q02554 436 aaPredicted RBP7.78□□□□□ -1.16
SPO12YHR152W JIP5Q06214 492 aaPredicted RBP7.78□□□□□ -1.16
SPO12YHR152W OXR1Q08952 273 aa7.78□□□□□ -1.16
SPO12YHR152W TRK1P12685 1235 aa7.77□□□□□ -1.17
SPO12YHR152W RGP1P16664 663 aa7.77□□□□□ -1.17
SPO12YHR152W NAP1P25293 417 aaKnown RBP7.77□□□□□ -1.17
SPO12YHR152W RPS26AP39938 119 aaKnown RBP7.77□□□□□ -1.17
SPO12YHR152W RPS26BP39939 119 aaKnown RBP7.77□□□□□ -1.17
SPO12YHR152W RMD1Q03441 430 aa7.77□□□□□ -1.17
SPO12YHR152W YGR122WP53272 402 aa7.76□□□□□ -1.17
SPO12YHR152W TOS4Q06266 489 aa7.76□□□□□ -1.17
SPO12YHR152W AIM46P38885 310 aa7.75□□□□□ -1.17
SPO12YHR152W UBP2Q01476 1272 aa7.75□□□□□ -1.17
SPO12YHR152W EMG1Q06287 252 aaKnown RBP7.75□□□□□ -1.17
SPO12YHR152W INP54Q08227 384 aaKnown RBP7.75□□□□□ -1.17
SPO12YHR152W CDC19P00549 500 aaKnown RBP7.74□□□□□ -1.17
SPO12YHR152W FLP1P03870 423 aa7.74□□□□□ -1.17
SPO12YHR152W YHL008CP38750 627 aa7.74□□□□□ -1.17
SPO12YHR152W ITC1P53125 1264 aa7.74□□□□□ -1.17
SPO12YHR152W AIM44Q99299 758 aa7.74□□□□□ -1.17
SPO12YHR152W HXK1P04806 485 aaKnown RBP7.73□□□□□ -1.17
SPO12YHR152W CYC8P14922 966 aa7.73□□□□□ -1.17
SPO12YHR152W CTR9P89105 1077 aa7.73□□□□□ -1.17
SPO12YHR152W ESF1Q06344 628 aaKnown RBP7.73□□□□□ -1.17
SPO12YHR152W MAG2Q06436 670 aaKnown RBP7.73□□□□□ -1.17
SPO12YHR152W PEP7P32609 515 aa7.72□□□□□ -1.17
SPO12YHR152W YIL165CP40446 119 aa7.72□□□□□ -1.17
SPO12YHR152W YLR346CQ06139 101 aa7.72□□□□□ -1.17
SPO12YHR152W YCS4Q06156 1176 aa7.72□□□□□ -1.17
SPO12YHR152W APM2P38700 605 aa7.71□□□□□ -1.18
SPO12YHR152W FAA3P39002 694 aa7.71□□□□□ -1.18
SPO12YHR152W BRE2P43132 505 aa7.71□□□□□ -1.18
SPO12YHR152W DAL4Q04895 635 aa7.71□□□□□ -1.18
SPO12YHR152W OPT2Q06593 877 aa7.71□□□□□ -1.18
SPO12YHR152W RAD2P07276 1031 aa7.7□□□□□ -1.18
SPO12YHR152W GLY1P37303 387 aaKnown RBP7.7□□□□□ -1.18
SPO12YHR152W OSH7P38755 437 aa7.7□□□□□ -1.18
SPO12YHR152W YNR040WP53736 256 aa7.7□□□□□ -1.18
SPO12YHR152W GCR2Q01722 534 aa7.7□□□□□ -1.18
SPO12YHR152W COBP00163 385 aa7.69□□□□□ -1.18
SPO12YHR152W PRP40P33203 583 aaKnown RBP7.69□□□□□ -1.18
SPO12YHR152W MRPL16P38064 232 aa7.69□□□□□ -1.18
SPO12YHR152W SRC1Q03707 834 aa7.69□□□□□ -1.18
SPO12YHR152W PYC2P32327 1180 aaKnown RBP7.68□□□□□ -1.18
SPO12YHR152W OCA5P38738 679 aa7.68□□□□□ -1.18
SPO12YHR152W VPS16Q03308 798 aa7.68□□□□□ -1.18
SPO12YHR152W MSH6Q03834 1242 aa7.68□□□□□ -1.18
SPO12YHR152W NCL1P38205 684 aaKnown RBP7.67□□□□□ -1.18
SPO12YHR152W MAD1P40957 749 aa7.67□□□□□ -1.18
SPO12YHR152W NAM8Q00539 523 aaKnown RBP7.67□□□□□ -1.18
SPO12YHR152W PIN2Q12057 282 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms