RNA–Protein interactions for RNA: YHR100C

GEP4, Transcript of Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase), yeast

Gene GEP4, Length 558 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP4	YHR100C	RPC82	P32349	654 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	GLC3	P32775	704 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	PPX1	P38698	397 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	KXD1	P53158	218 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	DNM1	P54861	757 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	GCR2	Q01722	534 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	PUF6	Q04373	656 aa	Known RBP	4.19	□□□□□ -1.74
GEP4	YHR100C	AGE1	Q04412	482 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	YOR389W	Q08912	624 aa		4.19	□□□□□ -1.74
GEP4	YHR100C	RUD3	Q12234	484 aa	Known RBP	4.19	□□□□□ -1.74
GEP4	YHR100C	CYB2	P00175	591 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	CLN1	P20437	546 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	YHR218W	P38899	603 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	STM1	P39015	273 aa	Known RBP	4.18	□□□□□ -1.74
GEP4	YHR100C	MEP1	P40260	492 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	CCM1	P48237	864 aa	Predicted RBP	4.18	□□□□□ -1.74
GEP4	YHR100C	RNH70	P53331	553 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	ELA1	P53861	379 aa	Predicted RBP	4.18	□□□□□ -1.74
GEP4	YHR100C	YNL058C	P53947	316 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	RRB1	Q04225	511 aa	Known RBP	4.18	□□□□□ -1.74
GEP4	YHR100C	AIM7	Q12156	149 aa		4.18	□□□□□ -1.74
GEP4	YHR100C	LSP1	Q12230	341 aa	Known RBP	4.18	□□□□□ -1.74
GEP4	YHR100C	NOP14	Q99207	810 aa	Known RBP	4.18	□□□□□ -1.74
GEP4	YHR100C	GAR1	P28007	205 aa	Known RBP	4.17	□□□□□ -1.74
GEP4	YHR100C	EFB1	P32471	206 aa	Known RBP	4.17	□□□□□ -1.74
GEP4	YHR100C	PES4	P39684	611 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	RTT106	P40161	455 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	BRE2	P43132	505 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	TBF1	Q02457	562 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	HED1	Q03937	162 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	ITT1	Q04638	464 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	NSE3	Q05541	303 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	PHM6	Q05637	104 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	RIX7	Q07844	837 aa	Known RBP	4.17	□□□□□ -1.74
GEP4	YHR100C	PCL8	Q08966	492 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	NFI1	Q12216	726 aa		4.17	□□□□□ -1.74
GEP4	YHR100C	CDC4	P07834	779 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	THR4	P16120	514 aa	Known RBP	4.16	□□□□□ -1.74
GEP4	YHR100C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
GEP4	YHR100C	PPG1	P32838	368 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	SEC6	P32844	805 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	ARC19	P33204	171 aa	Known RBP	4.16	□□□□□ -1.74
GEP4	YHR100C	YTA6	P40328	754 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	TIM11	P81449	96 aa	Predicted RBP	4.16	□□□□□ -1.74
GEP4	YHR100C	ERV41	Q04651	352 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	RRP9	Q06506	573 aa	Known RBP	4.16	□□□□□ -1.74
GEP4	YHR100C	AVO1	Q08236	1176 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	TYW1	Q08960	810 aa	Known RBP	4.16	□□□□□ -1.74
GEP4	YHR100C	MMP1	Q12372	583 aa		4.16	□□□□□ -1.74
GEP4	YHR100C	MOD5	P07884	428 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	KDX1	P36005	433 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	VPS24	P36095	224 aa	Known RBP	4.15	□□□□□ -1.75
GEP4	YHR100C	PAF1	P38351	445 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	SIC1	P38634	284 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	SMC3	P47037	1230 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	GYP7	P48365	746 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	HST3	P53687	447 aa		4.15	□□□□□ -1.75
GEP4	YHR100C	SXM1	Q04175	944 aa	Known RBP	4.15	□□□□□ -1.75
GEP4	YHR100C	VMS1	Q04311	632 aa	Known RBP	4.15	□□□□□ -1.75
GEP4	YHR100C	SWI6	P09959	803 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	CMP2	P14747	604 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	ESS1	P22696	170 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
GEP4	YHR100C	GLN1	P32288	370 aa	Known RBP	4.14	□□□□□ -1.75
GEP4	YHR100C	NIP100	P33420	868 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	ASH1	P34233	588 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	TPS3	P38426	1054 aa	Known RBP	4.14	□□□□□ -1.75
GEP4	YHR100C	HXT5	P38695	592 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	ETP1	P38748	585 aa	Known RBP	4.14	□□□□□ -1.75
GEP4	YHR100C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
GEP4	YHR100C	HXT10	P43581	546 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	TIM54	P47045	478 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	PUS6	P53294	404 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	JJJ1	P53863	590 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	OYE2	Q03558	400 aa	Known RBP	4.14	□□□□□ -1.75
GEP4	YHR100C	ARR1	Q06596	294 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	PSR1	Q07800	427 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	CLP1	Q08685	445 aa	Predicted RBP	4.14	□□□□□ -1.75
GEP4	YHR100C	YDL206W	Q12424	762 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	APC2	Q12440	853 aa		4.14	□□□□□ -1.75
GEP4	YHR100C	THS1	P04801	734 aa	Known RBP	4.13	□□□□□ -1.75
GEP4	YHR100C	TRM1	P15565	570 aa	Known RBP	4.13	□□□□□ -1.75
GEP4	YHR100C	YEF3	P16521	1044 aa	Known RBP	4.13	□□□□□ -1.75
GEP4	YHR100C	UBP1	P25037	809 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	KIP2	P28743	706 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	RTG2	P32608	588 aa	Known RBP	4.13	□□□□□ -1.75
GEP4	YHR100C	ANP1	P32629	500 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	ALD2	P47771	506 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	OCA1	P50946	238 aa	Predicted RBP	4.13	□□□□□ -1.75
GEP4	YHR100C	HST2	P53686	357 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	CTR9	P89105	1077 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	HPC2	Q01448	625 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	SEN54	Q02825	467 aa	Predicted RBP	4.13	□□□□□ -1.75
GEP4	YHR100C	VTI1	Q04338	217 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	CDC45	Q08032	650 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	MET32	Q12041	191 aa		4.13	□□□□□ -1.75
GEP4	YHR100C	PDC1	P06169	563 aa	Known RBP	4.12	□□□□□ -1.75
GEP4	YHR100C	SPS1	P08458	490 aa		4.12	□□□□□ -1.75
GEP4	YHR100C	KAR3	P17119	729 aa		4.12	□□□□□ -1.75
GEP4	YHR100C	SRP54	P20424	541 aa	Known RBP	4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms