RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C APC11Q12157 165 aa3.51□□□□□ -1.85
RPN1YHR027C SAC3P46674 1301 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-HO13535 1793 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-DR5P0C2I2 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-DR6P0C2I3 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-LR2P0C2I5 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-LR3P0C2I6 1755 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C TY1B-PR1P0C2I9 1755 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C TY1B-PR2P0C2J0 1756 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-PR3P0C2J1 1755 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C TY1B-JR1P47098 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-ML2Q03434 1755 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C TY1B-ER1Q03612 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-ML1Q04711 1755 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C TY1B-GR2Q12269 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-OLQ12273 1755 aa3.51□□□□□ -1.85
RPN1YHR027C TY1B-PLQ12414 1755 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C NTE1Q04958 1679 aa3.51□□□□□ -1.85
RPN1YHR027C KRS1P15180 591 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C PET100P38958 111 aa3.51□□□□□ -1.85
RPN1YHR027C ALD4P46367 519 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C YNL247WP53852 767 aaKnown RBP3.51□□□□□ -1.85
RPN1YHR027C VPS20Q04272 221 aa3.51□□□□□ -1.85
RPN1YHR027C PDR18P53756 1333 aa3.51□□□□□ -1.85
RPN1YHR027C IML1P47170 1584 aa3.5□□□□□ -1.85
RPN1YHR027C YOR093CQ12275 1648 aa3.5□□□□□ -1.85
RPN1YHR027C DLD1P32891 587 aa3.5□□□□□ -1.85
RPN1YHR027C RRP1P35178 278 aaPredicted RBP3.5□□□□□ -1.85
RPN1YHR027C KDX1P36005 433 aa3.5□□□□□ -1.85
RPN1YHR027C DID4P36108 232 aa3.5□□□□□ -1.85
RPN1YHR027C PDR11P40550 1411 aa3.5□□□□□ -1.85
RPN1YHR027C SEC20P28791 383 aa3.5□□□□□ -1.85
RPN1YHR027C SEC66P33754 206 aa3.5□□□□□ -1.85
RPN1YHR027C SHC1P39000 512 aa3.5□□□□□ -1.85
RPN1YHR027C SAP155P43612 1002 aa3.5□□□□□ -1.85
RPN1YHR027C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.5□□□□□ -1.85not detected
RPN1YHR027C SNT2P53127 1403 aa3.5□□□□□ -1.85
RPN1YHR027C YPR172WQ06608 200 aa3.5□□□□□ -1.85
RPN1YHR027C RIX7Q07844 837 aaKnown RBP3.5□□□□□ -1.85
RPN1YHR027C WHI5Q12416 295 aa3.5□□□□□ -1.85
RPN1YHR027C CDC37P06101 506 aaKnown RBP3.49□□□□□ -1.85
RPN1YHR027C TRK1P12685 1235 aa3.49□□□□□ -1.85
RPN1YHR027C DAL7P21826 554 aa3.49□□□□□ -1.85
RPN1YHR027C BUD14P27637 709 aa3.49□□□□□ -1.85
RPN1YHR027C TPD3P31383 635 aa3.49□□□□□ -1.85
RPN1YHR027C VPS35P34110 944 aa3.49□□□□□ -1.85
RPN1YHR027C SLD2P34252 453 aa3.49□□□□□ -1.85
RPN1YHR027C MUD2P36084 527 aaKnown RBP3.49□□□□□ -1.85
RPN1YHR027C EFM2P38347 419 aa3.49□□□□□ -1.85
RPN1YHR027C GYP7P48365 746 aa3.49□□□□□ -1.85
RPN1YHR027C DPL1Q05567 589 aa3.49□□□□□ -1.85
RPN1YHR027C RSA3Q05942 220 aaKnown RBP3.49□□□□□ -1.85
RPN1YHR027C RRP9Q06506 573 aaKnown RBP3.49□□□□□ -1.85
RPN1YHR027C APC2Q12440 853 aa3.49□□□□□ -1.85
RPN1YHR027C PMR1P13586 950 aa3.49□□□□□ -1.85
RPN1YHR027C PRP16P15938 1071 aaPredicted RBP3.49□□□□□ -1.85
RPN1YHR027C CDC48P25694 835 aaKnown RBP3.49□□□□□ -1.85
RPN1YHR027C CPS1P27614 576 aa3.49□□□□□ -1.85
RPN1YHR027C YEL1P34225 687 aa3.49□□□□□ -1.85
RPN1YHR027C LHS1P36016 881 aa3.49□□□□□ -1.85
RPN1YHR027C LCB5Q06147 687 aaKnown RBP3.49□□□□□ -1.85
RPN1YHR027C SFH1Q06168 426 aa3.49□□□□□ -1.85
RPN1YHR027C DNL4Q08387 944 aaPredicted RBP3.49□□□□□ -1.85
RPN1YHR027C ATE1P16639 503 aa3.48□□□□□ -1.85
RPN1YHR027C FAR1P21268 830 aa3.48□□□□□ -1.85
RPN1YHR027C RPC37P36121 282 aa3.48□□□□□ -1.85
RPN1YHR027C YGL081WP53156 320 aa3.48□□□□□ -1.85
RPN1YHR027C MRD1Q06106 887 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C NOC3Q07896 663 aaPredicted RBP3.48□□□□□ -1.85
RPN1YHR027C MET7Q08645 548 aa3.48□□□□□ -1.85
RPN1YHR027C CHS5Q12114 671 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C DNF3Q12674 1656 aa3.48□□□□□ -1.85
RPN1YHR027C SES1P07284 462 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C GAL11P19659 1081 aa3.48□□□□□ -1.85
RPN1YHR027C SEC6P32844 805 aa3.48□□□□□ -1.85
RPN1YHR027C CTH1P47976 325 aa3.48□□□□□ -1.85
RPN1YHR027C NCS2P53923 493 aaPredicted RBP3.48□□□□□ -1.85
RPN1YHR027C HEH2Q03281 663 aa3.48□□□□□ -1.85
RPN1YHR027C STE23Q06010 1027 aa3.48□□□□□ -1.85
RPN1YHR027C SMC6Q12749 1114 aa3.48□□□□□ -1.85
RPN1YHR027C UTP10P42945 1769 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C YSP2Q06681 1438 aa3.48□□□□□ -1.85
RPN1YHR027C SIR4P11978 1358 aa3.48□□□□□ -1.85
RPN1YHR027C KRE5P22023 1365 aa3.48□□□□□ -1.85
RPN1YHR027C SWI1P09547 1314 aa3.48□□□□□ -1.85
RPN1YHR027C RPL17AP05740 184 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C BIK1P11709 440 aa3.48□□□□□ -1.85
RPN1YHR027C CDC60P26637 1090 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C MET4P32389 672 aa3.48□□□□□ -1.85
RPN1YHR027C ATG14P38270 344 aa3.48□□□□□ -1.85
RPN1YHR027C ILV3P39522 585 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C ASI1P54074 624 aa3.48□□□□□ -1.85
RPN1YHR027C SEC5P89102 971 aa3.48□□□□□ -1.85
RPN1YHR027C GCR2Q01722 534 aa3.48□□□□□ -1.85
RPN1YHR027C SRC1Q03707 834 aa3.48□□□□□ -1.85
RPN1YHR027C HEL2Q05580 639 aaKnown RBP3.48□□□□□ -1.85
RPN1YHR027C SPO14P36126 1683 aa3.47□□□□□ -1.85
RPN1YHR027C UBP1P25037 809 aa3.47□□□□□ -1.85
RPN1YHR027C PDB1P32473 366 aaKnown RBP3.47□□□□□ -1.85
RPN1YHR027C PET112P33893 541 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms