RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YPR097WQ06839 1073 aa3.87□□□□□ -1.79
XRN1YGL173C ERG12P07277 443 aa3.87□□□□□ -1.79
XRN1YGL173C SLX5P32828 619 aaKnown RBP3.87□□□□□ -1.79
XRN1YGL173C KAR5Q04746 504 aa3.87□□□□□ -1.79
XRN1YGL173C PSR2Q07949 397 aa3.87□□□□□ -1.79
XRN1YGL173C UGO1Q03327 502 aa3.87□□□□□ -1.79
XRN1YGL173C YOL036WQ08206 761 aa3.87□□□□□ -1.79
XRN1YGL173C ROM1P53046 1155 aa3.87□□□□□ -1.79
XRN1YGL173C PNP1Q05788 311 aa3.87□□□□□ -1.79
XRN1YGL173C BOL3P39724 118 aa3.86□□□□□ -1.79
XRN1YGL173C YML083CQ04526 418 aa3.86□□□□□ -1.79
XRN1YGL173C RLP24Q07915 199 aaKnown RBP3.86□□□□□ -1.79
XRN1YGL173C HXK1P04806 485 aaKnown RBP3.86□□□□□ -1.79
XRN1YGL173C IES5P40060 125 aa3.86□□□□□ -1.79
XRN1YGL173C JIP4Q03361 876 aa3.86□□□□□ -1.79
XRN1YGL173C BNR1P40450 1375 aa3.86□□□□□ -1.79
XRN1YGL173C HSP82P02829 709 aaKnown RBP3.86□□□□□ -1.79
XRN1YGL173C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
XRN1YGL173C PKH3Q03306 898 aaPredicted RBP3.86□□□□□ -1.79
XRN1YGL173C TPS3P38426 1054 aaKnown RBP3.85□□□□□ -1.79
XRN1YGL173C YNL108CP53929 270 aa3.85□□□□□ -1.79
XRN1YGL173C STE20Q03497 939 aaKnown RBP3.85□□□□□ -1.79
XRN1YGL173C CYC8P14922 966 aa3.85□□□□□ -1.79
XRN1YGL173C TY4A-JP47023 414 aa3.85□□□□□ -1.79
XRN1YGL173C VHS3Q08438 674 aa3.85□□□□□ -1.79
XRN1YGL173C TMA46Q12000 345 aaKnown RBP3.85□□□□□ -1.79
XRN1YGL173C CDC34P14682 295 aa3.85□□□□□ -1.79
XRN1YGL173C EAP1P36041 632 aaKnown RBP3.85□□□□□ -1.79
XRN1YGL173C EMW1P42842 904 aaKnown RBP3.85□□□□□ -1.79
XRN1YGL173C YDL121CQ07541 149 aa3.85□□□□□ -1.79
XRN1YGL173C CIC1P38779 376 aaKnown RBP3.85□□□□□ -1.79
XRN1YGL173C YNL011CP53980 444 aa3.85□□□□□ -1.79
XRN1YGL173C YLR125WQ12138 136 aa3.85□□□□□ -1.79
XRN1YGL173C TRM3Q07527 1436 aa3.85□□□□□ -1.79
XRN1YGL173C MIP1P15801 1254 aa3.84□□□□□ -1.79
XRN1YGL173C SMY2P32909 740 aaKnown RBP3.84□□□□□ -1.79
XRN1YGL173C QDR1P40475 563 aa3.84□□□□□ -1.79
XRN1YGL173C GIR2Q03768 265 aaPredicted RBP3.84□□□□□ -1.79
XRN1YGL173C FUR4P05316 633 aaKnown RBP3.84□□□□□ -1.79
XRN1YGL173C DCD1P06773 312 aa3.84□□□□□ -1.79
XRN1YGL173C SMC1P32908 1225 aa3.84□□□□□ -1.79
XRN1YGL173C SCD5P34758 872 aa3.84□□□□□ -1.79
XRN1YGL173C VAN1P23642 535 aa3.84□□□□□ -1.8
XRN1YGL173C YGL015CP33199 130 aa3.84□□□□□ -1.8
XRN1YGL173C RRP8P38961 392 aaKnown RBP3.84□□□□□ -1.8
XRN1YGL173C MSH4P40965 878 aaPredicted RBP3.84□□□□□ -1.8
XRN1YGL173C YMR196WQ04336 1088 aa3.84□□□□□ -1.8
XRN1YGL173C FRT1Q99332 602 aa3.84□□□□□ -1.8
XRN1YGL173C DNF3Q12674 1656 aa3.84□□□□□ -1.8
XRN1YGL173C RKM3P38222 552 aa3.83□□□□□ -1.8
XRN1YGL173C SLI15P38283 698 aa3.83□□□□□ -1.8
XRN1YGL173C HOS4P40480 1083 aa3.83□□□□□ -1.8
XRN1YGL173C YPR109WQ06104 294 aa3.83□□□□□ -1.8
XRN1YGL173C GYP5Q12344 894 aa3.83□□□□□ -1.8
XRN1YGL173C HTA1P04911 132 aaKnown RBP3.83□□□□□ -1.8
XRN1YGL173C HTA2P04912 132 aa3.83□□□□□ -1.8
XRN1YGL173C PRP5P21372 849 aaPredicted RBP3.83□□□□□ -1.8
XRN1YGL173C NAN1Q02931 896 aaKnown RBP3.83□□□□□ -1.8
XRN1YGL173C YRR1Q12172 810 aa3.83□□□□□ -1.8
XRN1YGL173C YHR020WP38708 688 aaKnown RBP3.83□□□□□ -1.8
XRN1YGL173C RRP6Q12149 733 aaKnown RBP3.83□□□□□ -1.8
XRN1YGL173C SUV3P32580 737 aa3.83□□□□□ -1.8
XRN1YGL173C PBP2P38151 413 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
XRN1YGL173C YBR287WP38355 427 aa3.83□□□□□ -1.8
XRN1YGL173C TIF4632P39936 914 aaKnown RBP3.83□□□□□ -1.8
XRN1YGL173C GNP1P48813 663 aa3.83□□□□□ -1.8
XRN1YGL173C MCM2P29469 868 aa3.82□□□□□ -1.8
XRN1YGL173C SPF1P39986 1215 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C DAN4P47179 1161 aa3.82□□□□□ -1.8
XRN1YGL173C CWH41P53008 833 aa3.82□□□□□ -1.8
XRN1YGL173C YGR021WP53212 290 aa3.82□□□□□ -1.8
XRN1YGL173C GPI13Q07830 1017 aa3.82□□□□□ -1.8
XRN1YGL173C TY1B-NL2Q99337 1749 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C KAR2P16474 682 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C NPL6P32832 435 aa3.82□□□□□ -1.8
XRN1YGL173C YCK3P39962 524 aa3.82□□□□□ -1.8
XRN1YGL173C ACS2P52910 683 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C SCY1P53009 804 aa3.82□□□□□ -1.8
XRN1YGL173C ALD3P54114 506 aa3.82□□□□□ -1.8
XRN1YGL173C OPY2Q06810 360 aa3.82□□□□□ -1.8
XRN1YGL173C NOP14Q99207 810 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C TEC1P18412 486 aa3.82□□□□□ -1.8
XRN1YGL173C AGP1P25376 633 aa3.82□□□□□ -1.8
XRN1YGL173C RPS0BP46654 252 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C PUS4P48567 403 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C NOG1Q02892 647 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C NUP157P40064 1391 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C YDJ1P25491 409 aaKnown RBP3.82□□□□□ -1.8
XRN1YGL173C VAC17P25591 423 aa3.82□□□□□ -1.8
XRN1YGL173C PTC4P38089 393 aa3.82□□□□□ -1.8
XRN1YGL173C YPL109CQ02981 657 aa3.82□□□□□ -1.8
XRN1YGL173C ISU2Q12056 156 aa3.82□□□□□ -1.8
XRN1YGL173C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
XRN1YGL173C MSH2P25847 964 aa3.81□□□□□ -1.8
XRN1YGL173C SBA1P28707 216 aaKnown RBP3.81□□□□□ -1.8
XRN1YGL173C AGE1Q04412 482 aa3.81□□□□□ -1.8
XRN1YGL173C YGR161W-CQ3E744 92 aa3.81□□□□□ -1.8
XRN1YGL173C TRM1P15565 570 aaKnown RBP3.81□□□□□ -1.8
XRN1YGL173C BOI1P38041 980 aaKnown RBP3.81□□□□□ -1.8
XRN1YGL173C YAP3P38749 330 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms