RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W AAP1P37898 856 aaKnown RBP9.34□□□□□ -0.91
SHC1YER096W SET4P42948 560 aa9.34□□□□□ -0.91
SHC1YER096W ERO1Q03103 563 aa9.34□□□□□ -0.91
SHC1YER096W BRE1Q07457 700 aaKnown RBP9.34□□□□□ -0.91
SHC1YER096W SIT4P20604 311 aa9.33□□□□□ -0.92
SHC1YER096W CWH41P53008 833 aa9.33□□□□□ -0.92
SHC1YER096W SAS4Q04003 481 aa9.33□□□□□ -0.92
SHC1YER096W SRC1Q03707 834 aa9.32□□□□□ -0.92
SHC1YER096W LCB1P25045 558 aaKnown RBP9.31□□□□□ -0.92
SHC1YER096W KRE2P27809 442 aa9.31□□□□□ -0.92
SHC1YER096W KTR1P27810 393 aaKnown RBP9.31□□□□□ -0.92
SHC1YER096W IRC4Q03036 179 aa9.31□□□□□ -0.92
SHC1YER096W SPT21P35209 758 aa9.31□□□□□ -0.92
SHC1YER096W YMR147WP40218 223 aaKnown RBP9.31□□□□□ -0.92
SHC1YER096W YIR042CP40586 236 aa9.31□□□□□ -0.92
SHC1YER096W TOS4Q06266 489 aa9.31□□□□□ -0.92
SHC1YER096W RRI2Q12348 645 aa9.31□□□□□ -0.92
SHC1YER096W RET1P22276 1149 aaKnown RBP9.3□□□□□ -0.92
SHC1YER096W FLO1P32768 1537 aa9.3□□□□□ -0.92
SHC1YER096W LAM4P38800 1345 aa9.29□□□□□ -0.92
SHC1YER096W TRL1P09880 827 aaKnown RBP9.29□□□□□ -0.92
SHC1YER096W YKL222CP35995 705 aa9.29□□□□□ -0.92
SHC1YER096W PBY1P38254 753 aa9.29□□□□□ -0.92
SHC1YER096W INM2Q05533 292 aa9.29□□□□□ -0.92
SHC1YER096W RLF2Q12495 606 aa9.29□□□□□ -0.92
SHC1YER096W GSC2P40989 1895 aa9.28□□□□□ -0.92
SHC1YER096W PCT1P13259 424 aa9.28□□□□□ -0.92
SHC1YER096W RPT3P33298 428 aaKnown RBP9.28□□□□□ -0.92
SHC1YER096W FPR4Q06205 392 aaPredicted RBP9.27□□□□□ -0.93
SHC1YER096W FLO11P08640 1367 aa9.26□□□□□ -0.93
SHC1YER096W CTT1P06115 562 aa9.26□□□□□ -0.93
SHC1YER096W GRX7P38068 203 aa9.26□□□□□ -0.93
SHC1YER096W STM1P39015 273 aaKnown RBP9.26□□□□□ -0.93
SHC1YER096W BBC1P47068 1157 aa9.26□□□□□ -0.93
SHC1YER096W PKH3Q03306 898 aaPredicted RBP9.26□□□□□ -0.93
SHC1YER096W KAR5Q04746 504 aa9.26□□□□□ -0.93
SHC1YER096W GAS5Q08193 484 aa9.26□□□□□ -0.93
SHC1YER096W PIF1P07271 859 aa9.26□□□□□ -0.93
SHC1YER096W MRPL32P25348 183 aa9.26□□□□□ -0.93
SHC1YER096W ICL1P28240 557 aaPredicted RBP9.26□□□□□ -0.93
SHC1YER096W AIM9P40053 627 aaKnown RBP9.26□□□□□ -0.93
SHC1YER096W IME2P32581 645 aa9.25□□□□□ -0.93
SHC1YER096W RIM101P33400 625 aa9.25□□□□□ -0.93
SHC1YER096W NUG1P40010 520 aaKnown RBP9.25□□□□□ -0.93
SHC1YER096W YER156CP40093 338 aaKnown RBP9.25□□□□□ -0.93
SHC1YER096W PGA3Q12746 312 aaKnown RBP9.25□□□□□ -0.93
SHC1YER096W OSH3P38713 996 aaKnown RBP9.24□□□□□ -0.93
SHC1YER096W PTK1P36002 662 aaPredicted RBP9.23□□□□□ -0.93
SHC1YER096W DMA1P38823 416 aa9.23□□□□□ -0.93
SHC1YER096W GSM1P42950 618 aa9.23□□□□□ -0.93
SHC1YER096W GRX6Q12438 231 aa9.23□□□□□ -0.93
SHC1YER096W SNF3P10870 884 aa9.22□□□□□ -0.93
SHC1YER096W YFH7P43591 353 aa9.22□□□□□ -0.93
SHC1YER096W NSG2P53898 299 aa9.22□□□□□ -0.93
SHC1YER096W OPI1P21957 404 aa9.21□□□□□ -0.93
SHC1YER096W CIC1P38779 376 aaKnown RBP9.21□□□□□ -0.93
SHC1YER096W UBX2Q04228 584 aa9.21□□□□□ -0.93
SHC1YER096W PPM2Q08282 695 aa9.21□□□□□ -0.93
SHC1YER096W TOP1P04786 769 aa9.21□□□□□ -0.94
SHC1YER096W SRS2P12954 1174 aa9.21□□□□□ -0.94
SHC1YER096W NPA3P47122 385 aa9.21□□□□□ -0.94
SHC1YER096W WRS1Q12109 432 aaKnown RBP9.21□□□□□ -0.94
SHC1YER096W TAH18Q12181 623 aa9.21□□□□□ -0.94
SHC1YER096W ARG82P07250 355 aa9.2□□□□□ -0.94
SHC1YER096W COQ1P18900 473 aa9.2□□□□□ -0.94
SHC1YER096W YKU70P32807 602 aa9.2□□□□□ -0.94
SHC1YER096W IRC8P47046 822 aa9.2□□□□□ -0.94
SHC1YER096W DPL1Q05567 589 aa9.2□□□□□ -0.94
SHC1YER096W CHO2P05374 869 aaKnown RBP9.19□□□□□ -0.94
SHC1YER096W RNR2P09938 399 aaKnown RBP9.19□□□□□ -0.94
SHC1YER096W CYB2P00175 591 aa9.18□□□□□ -0.94
SHC1YER096W BOI1P38041 980 aaKnown RBP9.18□□□□□ -0.94
SHC1YER096W YHL050CP38721 697 aa9.18□□□□□ -0.94
SHC1YER096W JJJ2P46997 583 aa9.18□□□□□ -0.94
SHC1YER096W VPS20Q04272 221 aa9.18□□□□□ -0.94
SHC1YER096W RPS7AP26786 190 aaKnown RBP9.17□□□□□ -0.94
SHC1YER096W MDL2P33311 773 aa9.17□□□□□ -0.94
SHC1YER096W KRI1P42846 591 aaKnown RBP9.17□□□□□ -0.94
SHC1YER096W ECM23Q02710 187 aa9.17□□□□□ -0.94
SHC1YER096W PRP42Q03776 544 aaKnown RBP9.17□□□□□ -0.94
SHC1YER096W MET1P36150 593 aa9.16□□□□□ -0.94
SHC1YER096W DJP1P40564 432 aa9.16□□□□□ -0.94
SHC1YER096W HDA1P53973 706 aa9.16□□□□□ -0.94
SHC1YER096W IMP2'P32351 346 aa9.15□□□□□ -0.94
SHC1YER096W AFG2P32794 780 aa9.15□□□□□ -0.94
SHC1YER096W STV1P37296 890 aa9.15□□□□□ -0.94
SHC1YER096W SHC1P39000 512 aa9.15□□□□□ -0.94
SHC1YER096W VID28P40547 921 aa9.15□□□□□ -0.94
SHC1YER096W IOC3P43596 787 aa9.15□□□□□ -0.94
SHC1YER096W GAP1P19145 602 aaPredicted RBP9.15□□□□□ -0.95
SHC1YER096W PEP3P27801 918 aa9.15□□□□□ -0.95
SHC1YER096W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.15□□□□□ -0.95not detected
SHC1YER096W PSF3Q12146 194 aa9.15□□□□□ -0.95
SHC1YER096W RRG1Q12167 365 aaPredicted RBP9.15□□□□□ -0.95
SHC1YER096W NPL4P33755 580 aa9.14□□□□□ -0.95
SHC1YER096W GEF1P37020 779 aa9.13□□□□□ -0.95
SHC1YER096W SPO22P40511 975 aa9.13□□□□□ -0.95
SHC1YER096W PTK2P47116 818 aaKnown RBP9.13□□□□□ -0.95
SHC1YER096W ENP2P48234 707 aaKnown RBP9.13□□□□□ -0.95
SHC1YER096W SQS1P53866 767 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms