RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C GLO3P38682 493 aaKnown RBP9.25□□□□□ -0.93
PUP3YER094C HXT13P39924 564 aa9.25□□□□□ -0.93
PUP3YER094C YMR147WP40218 223 aaKnown RBP9.25□□□□□ -0.93
PUP3YER094C YIR042CP40586 236 aa9.25□□□□□ -0.93
PUP3YER094C PIB2P53191 635 aa9.25□□□□□ -0.93
PUP3YER094C HXT17P53631 564 aa9.25□□□□□ -0.93
PUP3YER094C KIN4Q01919 800 aa9.25□□□□□ -0.93
PUP3YER094C IRC4Q03036 179 aa9.25□□□□□ -0.93
PUP3YER094C RET1P22276 1149 aaKnown RBP9.24□□□□□ -0.93
PUP3YER094C AAP1P37898 856 aaKnown RBP9.24□□□□□ -0.93
PUP3YER094C HAL5P38970 855 aaKnown RBP9.24□□□□□ -0.93
PUP3YER094C YIR014WP40570 242 aa9.24□□□□□ -0.93
PUP3YER094C ENP2P48234 707 aaKnown RBP9.24□□□□□ -0.93
PUP3YER094C INM2Q05533 292 aa9.24□□□□□ -0.93
PUP3YER094C TOP1P04786 769 aa9.23□□□□□ -0.93
PUP3YER094C ICL1P28240 557 aaPredicted RBP9.23□□□□□ -0.93
PUP3YER094C TIF4632P39936 914 aaKnown RBP9.23□□□□□ -0.93
PUP3YER094C TPM1P17536 199 aaKnown RBP9.22□□□□□ -0.93
PUP3YER094C LCB1P25045 558 aaKnown RBP9.22□□□□□ -0.93
PUP3YER094C YKU70P32807 602 aa9.22□□□□□ -0.93
PUP3YER094C RPT3P33298 428 aaKnown RBP9.22□□□□□ -0.93
PUP3YER094C SET4P42948 560 aa9.22□□□□□ -0.93
PUP3YER094C JJJ2P46997 583 aa9.22□□□□□ -0.93
PUP3YER094C PSF3Q12146 194 aa9.22□□□□□ -0.93
PUP3YER094C KRI1P42846 591 aaKnown RBP9.21□□□□□ -0.94
PUP3YER094C GSM1P42950 618 aa9.21□□□□□ -0.94
PUP3YER094C RLF2Q12495 606 aa9.21□□□□□ -0.94
PUP3YER094C PTK1P36002 662 aaPredicted RBP9.2□□□□□ -0.94
PUP3YER094C YFH7P43591 353 aa9.2□□□□□ -0.94
PUP3YER094C OPI1P21957 404 aa9.19□□□□□ -0.94
PUP3YER094C MDL2P33311 773 aa9.19□□□□□ -0.94
PUP3YER094C IRC8P47046 822 aa9.19□□□□□ -0.94
PUP3YER094C TOS4Q06266 489 aa9.19□□□□□ -0.94
PUP3YER094C CYB2P00175 591 aa9.18□□□□□ -0.94
PUP3YER094C RNR2P09938 399 aaKnown RBP9.18□□□□□ -0.94
PUP3YER094C GEF1P37020 779 aa9.18□□□□□ -0.94
PUP3YER094C BOI1P38041 980 aaKnown RBP9.18□□□□□ -0.94
PUP3YER094C GRX7P38068 203 aa9.18□□□□□ -0.94
PUP3YER094C BBC1P47068 1157 aa9.18□□□□□ -0.94
PUP3YER094C LAM4P38800 1345 aa9.17□□□□□ -0.94
PUP3YER094C PCT1P13259 424 aa9.17□□□□□ -0.94
PUP3YER094C RRP8P38961 392 aaKnown RBP9.17□□□□□ -0.94
PUP3YER094C SHC1P39000 512 aa9.17□□□□□ -0.94
PUP3YER094C PRP42Q03776 544 aaKnown RBP9.17□□□□□ -0.94
PUP3YER094C DPL1Q05567 589 aa9.17□□□□□ -0.94
PUP3YER094C GAS5Q08193 484 aa9.17□□□□□ -0.94
PUP3YER094C WRS1Q12109 432 aaKnown RBP9.17□□□□□ -0.94
PUP3YER094C RRG1Q12167 365 aaPredicted RBP9.17□□□□□ -0.94
PUP3YER094C TAH18Q12181 623 aa9.17□□□□□ -0.94
PUP3YER094C RPS9BP05755 195 aaKnown RBP9.16□□□□□ -0.94
PUP3YER094C ARG82P07250 355 aa9.16□□□□□ -0.94
PUP3YER094C NPL4P33755 580 aa9.16□□□□□ -0.94
PUP3YER094C MET1P36150 593 aa9.16□□□□□ -0.94
PUP3YER094C OPY1P38271 328 aa9.16□□□□□ -0.94
PUP3YER094C CIC1P38779 376 aaKnown RBP9.16□□□□□ -0.94
PUP3YER094C IOC3P43596 787 aa9.16□□□□□ -0.94
PUP3YER094C SQS1P53866 767 aaKnown RBP9.16□□□□□ -0.94
PUP3YER094C KAR5Q04746 504 aa9.16□□□□□ -0.94
PUP3YER094C TRL1P09880 827 aaKnown RBP9.15□□□□□ -0.94
PUP3YER094C SRS2P12954 1174 aa9.15□□□□□ -0.94
PUP3YER094C PKH3Q03306 898 aaPredicted RBP9.15□□□□□ -0.94
PUP3YER094C DIP2Q12220 943 aaPredicted RBP9.15□□□□□ -0.94
PUP3YER094C RPS7AP26786 190 aaKnown RBP9.14□□□□□ -0.95
PUP3YER094C AFG2P32794 780 aa9.14□□□□□ -0.95
PUP3YER094C SPO22P40511 975 aa9.14□□□□□ -0.95
PUP3YER094C PIP2P52960 996 aa9.14□□□□□ -0.95
PUP3YER094C SEN54Q02825 467 aaPredicted RBP9.14□□□□□ -0.95
PUP3YER094C SSF2Q12153 453 aaPredicted RBP9.14□□□□□ -0.95
PUP3YER094C PGA3Q12746 312 aaKnown RBP9.14□□□□□ -0.95
PUP3YER094C SNF3P10870 884 aa9.13□□□□□ -0.95
PUP3YER094C IMP2'P32351 346 aa9.13□□□□□ -0.95
PUP3YER094C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95not detected
PUP3YER094C SLN1P39928 1220 aaPredicted RBP9.13□□□□□ -0.95
PUP3YER094C AIM9P40053 627 aaKnown RBP9.13□□□□□ -0.95
PUP3YER094C APL6P46682 809 aa9.13□□□□□ -0.95
PUP3YER094C PUS6P53294 404 aa9.13□□□□□ -0.95
PUP3YER094C ACK1Q07622 623 aaPredicted RBP9.13□□□□□ -0.95
PUP3YER094C FLO1P32768 1537 aa9.13□□□□□ -0.95
PUP3YER094C FLO11P08640 1367 aa9.12□□□□□ -0.95
PUP3YER094C MSM1P22438 575 aa9.12□□□□□ -0.95
PUP3YER094C SIS2P36024 562 aa9.12□□□□□ -0.95
PUP3YER094C ESF1Q06344 628 aaKnown RBP9.12□□□□□ -0.95
PUP3YER094C ATG20Q07528 640 aa9.12□□□□□ -0.95
PUP3YER094C PPM2Q08282 695 aa9.12□□□□□ -0.95
PUP3YER094C SSA1P10591 642 aaKnown RBP9.11□□□□□ -0.95
PUP3YER094C COQ1P18900 473 aa9.11□□□□□ -0.95
PUP3YER094C PEP3P27801 918 aa9.11□□□□□ -0.95
PUP3YER094C FPK1P53739 893 aa9.11□□□□□ -0.95
PUP3YER094C CRF1Q04930 467 aa9.11□□□□□ -0.95
PUP3YER094C MRD1Q06106 887 aaKnown RBP9.11□□□□□ -0.95
PUP3YER094C TSR3Q12094 313 aaKnown RBP9.11□□□□□ -0.95
PUP3YER094C GSC2P40989 1895 aa9.11□□□□□ -0.95
PUP3YER094C SLI15P38283 698 aa9.1□□□□□ -0.95
PUP3YER094C ARP5P53946 755 aa9.1□□□□□ -0.95
PUP3YER094C UFD2P54860 961 aa9.1□□□□□ -0.95
PUP3YER094C TRM44Q02648 567 aaKnown RBP9.1□□□□□ -0.95
PUP3YER094C IME2P32581 645 aa9.09□□□□□ -0.95
PUP3YER094C CRG1P38892 291 aaRIP-Chip data9.09□□□□□ -0.95not detected
PUP3YER094C VPS20Q04272 221 aa9.09□□□□□ -0.95
PUP3YER094C SPN1Q06505 410 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms