RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C GLO3P38682 493 aaKnown RBP12.87□□□□□ -0.35
SPC25YER018C TIF4632P39936 914 aaKnown RBP12.87□□□□□ -0.35
SPC25YER018C YIR042CP40586 236 aa12.87□□□□□ -0.35
SPC25YER018C SET4P42948 560 aa12.87□□□□□ -0.35
SPC25YER018C GCR2Q01722 534 aa12.87□□□□□ -0.35
SPC25YER018C INM2Q05533 292 aa12.87□□□□□ -0.35
SPC25YER018C FPR4Q06205 392 aaPredicted RBP12.87□□□□□ -0.35
SPC25YER018C HKR1P41809 1802 aa12.86□□□□□ -0.35
SPC25YER018C DLD1P32891 587 aa12.86□□□□□ -0.35
SPC25YER018C STM1P39015 273 aaKnown RBP12.86□□□□□ -0.35
SPC25YER018C EPS1P40557 701 aa12.86□□□□□ -0.35
SPC25YER018C GSM1P42950 618 aa12.86□□□□□ -0.35
SPC25YER018C RIM20Q12033 661 aa12.86□□□□□ -0.35
SPC25YER018C RPT3P33298 428 aaKnown RBP12.85□□□□□ -0.35
SPC25YER018C JJJ2P46997 583 aa12.85□□□□□ -0.35
SPC25YER018C DPL1Q05567 589 aa12.84□□□□□ -0.35
SPC25YER018C TOS4Q06266 489 aa12.84□□□□□ -0.35
SPC25YER018C FIG2P25653 1609 aa12.84□□□□□ -0.35
SPC25YER018C YMR147WP40218 223 aaKnown RBP12.83□□□□□ -0.36
SPC25YER018C SQS1P53866 767 aaKnown RBP12.83□□□□□ -0.36
SPC25YER018C SHC1P39000 512 aa12.82□□□□□ -0.36
SPC25YER018C YFH7P43591 353 aa12.82□□□□□ -0.36
SPC25YER018C HXT17P53631 564 aa12.82□□□□□ -0.36
SPC25YER018C GAS5Q08193 484 aa12.82□□□□□ -0.36
SPC25YER018C PSF3Q12146 194 aa12.82□□□□□ -0.36
SPC25YER018C PTK1P36002 662 aaPredicted RBP12.81□□□□□ -0.36
SPC25YER018C AAP1P37898 856 aaKnown RBP12.81□□□□□ -0.36
SPC25YER018C OSH3P38713 996 aaKnown RBP12.81□□□□□ -0.36
SPC25YER018C HXT13P39924 564 aa12.81□□□□□ -0.36
SPC25YER018C PRP42Q03776 544 aaKnown RBP12.81□□□□□ -0.36
SPC25YER018C DIP2Q12220 943 aaPredicted RBP12.81□□□□□ -0.36
SPC25YER018C SSA1P10591 642 aaKnown RBP12.8□□□□□ -0.36
SPC25YER018C ENP2P48234 707 aaKnown RBP12.8□□□□□ -0.36
SPC25YER018C WRS1Q12109 432 aaKnown RBP12.8□□□□□ -0.36
SPC25YER018C RRG1Q12167 365 aaPredicted RBP12.8□□□□□ -0.36
SPC25YER018C RPS9BP05755 195 aaKnown RBP12.79□□□□□ -0.36
SPC25YER018C MDL2P33311 773 aa12.79□□□□□ -0.36
SPC25YER018C GRX7P38068 203 aa12.79□□□□□ -0.36
SPC25YER018C ATG20Q07528 640 aa12.78□□□□□ -0.36
SPC25YER018C CYB2P00175 591 aa12.77□□□□□ -0.37
SPC25YER018C ARG82P07250 355 aa12.77□□□□□ -0.37
SPC25YER018C AFG2P32794 780 aa12.77□□□□□ -0.37
SPC25YER018C BOI1P38041 980 aaKnown RBP12.77□□□□□ -0.37
SPC25YER018C OPI1P21957 404 aa12.76□□□□□ -0.37
SPC25YER018C MSM1P22438 575 aa12.76□□□□□ -0.37
SPC25YER018C IRC8P47046 822 aa12.76□□□□□ -0.37
SPC25YER018C SLI15P38283 698 aa12.75□□□□□ -0.37
SPC25YER018C KRI1P42846 591 aaKnown RBP12.75□□□□□ -0.37
SPC25YER018C BBC1P47068 1157 aa12.75□□□□□ -0.37
SPC25YER018C FPK1P53739 893 aa12.75□□□□□ -0.37
SPC25YER018C TAH18Q12181 623 aa12.75□□□□□ -0.37
SPC25YER018C RPS7AP26786 190 aaKnown RBP12.74□□□□□ -0.37
SPC25YER018C YIR014WP40570 242 aa12.74□□□□□ -0.37
SPC25YER018C SEN54Q02825 467 aaPredicted RBP12.74□□□□□ -0.37
SPC25YER018C PKH3Q03306 898 aaPredicted RBP12.74□□□□□ -0.37
SPC25YER018C LAM4P38800 1345 aa12.73□□□□□ -0.37
SPC25YER018C TPM1P17536 199 aaKnown RBP12.73□□□□□ -0.37
SPC25YER018C PUS6P53294 404 aa12.73□□□□□ -0.37
SPC25YER018C KAR5Q04746 504 aa12.73□□□□□ -0.37
SPC25YER018C NPL4P33755 580 aa12.72□□□□□ -0.37
SPC25YER018C GEF1P37020 779 aa12.72□□□□□ -0.37
SPC25YER018C IOC3P43596 787 aa12.72□□□□□ -0.37
SPC25YER018C APL6P46682 809 aa12.72□□□□□ -0.37
SPC25YER018C PIP2P52960 996 aa12.72□□□□□ -0.37
SPC25YER018C TRM44Q02648 567 aaKnown RBP12.72□□□□□ -0.37
SPC25YER018C CRF1Q04930 467 aa12.72□□□□□ -0.37
SPC25YER018C ACK1Q07622 623 aaPredicted RBP12.72□□□□□ -0.37
SPC25YER018C RLF2Q12495 606 aa12.72□□□□□ -0.37
SPC25YER018C SNF3P10870 884 aa12.71□□□□□ -0.37
SPC25YER018C MET1P36150 593 aa12.71□□□□□ -0.37
SPC25YER018C RRP8P38961 392 aaKnown RBP12.71□□□□□ -0.37
SPC25YER018C FLO11P08640 1367 aa12.7□□□□□ -0.38
SPC25YER018C PGA3Q12746 312 aaKnown RBP12.7□□□□□ -0.38
SPC25YER018C GAP1P19145 602 aaPredicted RBP12.69□□□□□ -0.38
SPC25YER018C CIC1P38779 376 aaKnown RBP12.69□□□□□ -0.38
SPC25YER018C SLN1P39928 1220 aaPredicted RBP12.69□□□□□ -0.38
SPC25YER018C PPM2Q08282 695 aa12.69□□□□□ -0.38
SPC25YER018C COQ1P18900 473 aa12.68□□□□□ -0.38
SPC25YER018C VPS4P52917 437 aa12.68□□□□□ -0.38
SPC25YER018C SSF2Q12153 453 aaPredicted RBP12.68□□□□□ -0.38
SPC25YER018C TRL1P09880 827 aaKnown RBP12.67□□□□□ -0.38
SPC25YER018C IMP2'P32351 346 aa12.67□□□□□ -0.38
SPC25YER018C STV1P37296 890 aa12.67□□□□□ -0.38
SPC25YER018C AIM7Q12156 149 aa12.67□□□□□ -0.38
SPC25YER018C RNR2P09938 399 aaKnown RBP12.66□□□□□ -0.38
SPC25YER018C GLC3P32775 704 aa12.66□□□□□ -0.38
SPC25YER018C FET4P40988 552 aa12.66□□□□□ -0.38
SPC25YER018C NSG2P53898 299 aa12.66□□□□□ -0.38
SPC25YER018C SKI2P35207 1287 aaKnown RBP RIP-Chip data12.65□□□□□ -0.38not detected
SPC25YER018C TIM50Q02776 476 aa12.65□□□□□ -0.38
SPC25YER018C MRD1Q06106 887 aaKnown RBP12.65□□□□□ -0.38
SPC25YER018C ESF1Q06344 628 aaKnown RBP12.65□□□□□ -0.38
SPC25YER018C FLO1P32768 1537 aa12.64□□□□□ -0.39
SPC25YER018C THS1P04801 734 aaKnown RBP12.64□□□□□ -0.39
SPC25YER018C CHO2P05374 869 aaKnown RBP12.64□□□□□ -0.39
SPC25YER018C HPR1P17629 752 aaKnown RBP12.64□□□□□ -0.39
SPC25YER018C AIM9P40053 627 aaKnown RBP12.64□□□□□ -0.39
SPC25YER018C YPL260WQ08977 551 aa12.64□□□□□ -0.39
SPC25YER018C PCT1P13259 424 aa12.63□□□□□ -0.39
SPC25YER018C PEP3P27801 918 aa12.63□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms