RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C MIF2P35201 549 aa7.88□□□□□ -1.15
CDC13YDL220C YLR257WQ06146 321 aaKnown RBP7.88□□□□□ -1.15
CDC13YDL220C ECM4P36156 370 aa7.87□□□□□ -1.15
CDC13YDL220C COG4Q06096 861 aa7.87□□□□□ -1.15
CDC13YDL220C MMR1Q06324 491 aa7.87□□□□□ -1.15
CDC13YDL220C TSR2Q06672 205 aaKnown RBP7.87□□□□□ -1.15
CDC13YDL220C TPD3P31383 635 aa7.87□□□□□ -1.15
CDC13YDL220C DLD1P32891 587 aa7.87□□□□□ -1.15
CDC13YDL220C PET112P33893 541 aa7.87□□□□□ -1.15
CDC13YDL220C SYH1Q02875 849 aaKnown RBP7.87□□□□□ -1.15
CDC13YDL220C TY2B-LR1P0C2J3 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-FP0CX63 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-GR2P0CX64 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-CP25384 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-DR2Q03494 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY1B-DR1Q03855 1755 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-DR3Q07791 1770 aaKnown RBP7.86□□□□□ -1.15
CDC13YDL220C TY2B-OR1Q12113 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-DR1Q12472 1770 aa7.86□□□□□ -1.15
CDC13YDL220C TY2B-OR2Q12501 1770 aa7.86□□□□□ -1.15
CDC13YDL220C BNI4P53858 892 aa7.86□□□□□ -1.15
CDC13YDL220C GDB1Q06625 1536 aa7.86□□□□□ -1.15
CDC13YDL220C KEX1P09620 729 aa7.86□□□□□ -1.15
CDC13YDL220C DAL7P21826 554 aa7.86□□□□□ -1.15
CDC13YDL220C SSA4P22202 642 aaKnown RBP7.86□□□□□ -1.15
CDC13YDL220C VPS35P34110 944 aa7.86□□□□□ -1.15
CDC13YDL220C SFB2P53953 876 aa7.86□□□□□ -1.15
CDC13YDL220C SFH1Q06168 426 aa7.86□□□□□ -1.15
CDC13YDL220C APC2Q12440 853 aa7.86□□□□□ -1.15
CDC13YDL220C BUD2P33314 1104 aa7.85□□□□□ -1.15
CDC13YDL220C EFM2P38347 419 aa7.85□□□□□ -1.15
CDC13YDL220C SEC27P41811 889 aaKnown RBP7.85□□□□□ -1.15
CDC13YDL220C CTH1P47976 325 aa7.85□□□□□ -1.15
CDC13YDL220C ORM1P53224 222 aa7.85□□□□□ -1.15
CDC13YDL220C BRR1Q99177 341 aaPredicted RBP7.85□□□□□ -1.15
CDC13YDL220C ARD1P07347 238 aaPredicted RBP7.85□□□□□ -1.15
CDC13YDL220C BIK1P11709 440 aa7.85□□□□□ -1.15
CDC13YDL220C TRK1P12685 1235 aa7.85□□□□□ -1.15
CDC13YDL220C PRP16P15938 1071 aaPredicted RBP7.85□□□□□ -1.15
CDC13YDL220C SPT8P38915 602 aa7.85□□□□□ -1.15
CDC13YDL220C CUS1Q02554 436 aaPredicted RBP7.85□□□□□ -1.15
CDC13YDL220C YMR111CQ04461 462 aaPredicted RBP7.85□□□□□ -1.15
CDC13YDL220C MRD1Q06106 887 aaKnown RBP7.85□□□□□ -1.15
CDC13YDL220C OMS1Q06668 471 aa7.85□□□□□ -1.15
CDC13YDL220C MET7Q08645 548 aa7.85□□□□□ -1.15
CDC13YDL220C CHS5Q12114 671 aaKnown RBP7.85□□□□□ -1.15
CDC13YDL220C TRS33Q99394 268 aa7.85□□□□□ -1.15
CDC13YDL220C MET4P32389 672 aa7.84□□□□□ -1.15
CDC13YDL220C PLP1Q04004 230 aa7.84□□□□□ -1.15
CDC13YDL220C RUD3Q12234 484 aaKnown RBP7.84□□□□□ -1.15
CDC13YDL220C AUS1Q08409 1394 aa7.84□□□□□ -1.15
CDC13YDL220C KDX1P36005 433 aa7.84□□□□□ -1.15
CDC13YDL220C IES2P40154 320 aa7.84□□□□□ -1.15
CDC13YDL220C AIM21P40563 679 aa7.84□□□□□ -1.15
CDC13YDL220C YNL247WP53852 767 aaKnown RBP7.84□□□□□ -1.15
CDC13YDL220C HEH2Q03281 663 aa7.84□□□□□ -1.15
CDC13YDL220C YPR097WQ06839 1073 aa7.84□□□□□ -1.15
CDC13YDL220C TY4A-HQ6Q5P6 413 aa7.84□□□□□ -1.15
CDC13YDL220C RPC37P36121 282 aa7.83□□□□□ -1.16
CDC13YDL220C OSH3P38713 996 aaKnown RBP7.83□□□□□ -1.16
CDC13YDL220C BRL1P38770 471 aa7.83□□□□□ -1.16
CDC13YDL220C YKU80Q04437 629 aa7.83□□□□□ -1.16
CDC13YDL220C DPL1Q05567 589 aa7.83□□□□□ -1.16
CDC13YDL220C RSA3Q05942 220 aaKnown RBP7.83□□□□□ -1.16
CDC13YDL220C PDR1P12383 1068 aa7.83□□□□□ -1.16
CDC13YDL220C EFB1P32471 206 aaKnown RBP7.83□□□□□ -1.16
CDC13YDL220C SMY2P32909 740 aaKnown RBP7.83□□□□□ -1.16
CDC13YDL220C SAP155P43612 1002 aa7.83□□□□□ -1.16
CDC13YDL220C RBA50Q04418 439 aa7.83□□□□□ -1.16
CDC13YDL220C TY2B-BQ12491 1770 aa7.83□□□□□ -1.16
CDC13YDL220C YEF3P16521 1044 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C ECM32P32644 1121 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C LHS1P36016 881 aa7.82□□□□□ -1.16
CDC13YDL220C ATG3P40344 310 aa7.82□□□□□ -1.16
CDC13YDL220C SDA1P53313 767 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C TY3B-IQ7LHG5 1498 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C TRL1P09880 827 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C YKR018CP36114 725 aa7.82□□□□□ -1.16
CDC13YDL220C ATG14P38270 344 aa7.82□□□□□ -1.16
CDC13YDL220C SSZ1P38788 538 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C GGA2P38817 585 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C TSR1Q07381 788 aaKnown RBP7.82□□□□□ -1.16
CDC13YDL220C PRE10P21242 288 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
CDC13YDL220C NUP60P39705 539 aa7.82□□□□□ -1.16
CDC13YDL220C MAD1P40957 749 aa7.82□□□□□ -1.16
CDC13YDL220C ASI1P54074 624 aa7.82□□□□□ -1.16
CDC13YDL220C GDE1Q02979 1223 aa7.82□□□□□ -1.16
CDC13YDL220C SAC3P46674 1301 aa7.81□□□□□ -1.16
CDC13YDL220C CLB4P24871 460 aa7.81□□□□□ -1.16
CDC13YDL220C SIP3P38717 1229 aa7.81□□□□□ -1.16
CDC13YDL220C HXT13P39924 564 aa7.81□□□□□ -1.16
CDC13YDL220C VID28P40547 921 aa7.81□□□□□ -1.16
CDC13YDL220C REX2P54964 269 aaKnown RBP7.81□□□□□ -1.16
CDC13YDL220C SGD1Q06132 899 aa7.81□□□□□ -1.16
CDC13YDL220C YPR172WQ06608 200 aa7.81□□□□□ -1.16
CDC13YDL220C PRT1P06103 763 aaKnown RBP7.81□□□□□ -1.16
CDC13YDL220C ATE1P16639 503 aa7.81□□□□□ -1.16
CDC13YDL220C HCA4P20448 770 aaKnown RBP7.81□□□□□ -1.16
CDC13YDL220C BUD27P43573 796 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
CDC13YDL220C GYP7P48365 746 aa7.81□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms