RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeastyeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP30YCR021C COBP00163 385 aa5.22□□□□□ -1.57
HSP30YCR021C TRM1P15565 570 aaKnown RBP5.22□□□□□ -1.57
HSP30YCR021C GRX4P32642 244 aa5.22□□□□□ -1.57
HSP30YCR021C ASH1P34233 588 aa5.22□□□□□ -1.57
HSP30YCR021C YKL133CP36066 463 aa5.22□□□□□ -1.57
HSP30YCR021C RGA1P39083 1007 aa5.22□□□□□ -1.57
HSP30YCR021C RPN11P43588 306 aaKnown RBP5.22□□□□□ -1.57
HSP30YCR021C DSD1P53095 428 aa5.22□□□□□ -1.57
HSP30YCR021C THI22Q06490 572 aa5.22□□□□□ -1.57
HSP30YCR021C MET32Q12041 191 aa5.22□□□□□ -1.57
HSP30YCR021C YDL206WQ12424 762 aa5.22□□□□□ -1.57
HSP30YCR021C URB1P34241 1764 aaKnown RBP5.21□□□□□ -1.57
HSP30YCR021C YJU3P28321 313 aa5.21□□□□□ -1.58
HSP30YCR021C AKL1P38080 1108 aaKnown RBP5.21□□□□□ -1.58
HSP30YCR021C RTR1P40084 226 aaPredicted RBP5.21□□□□□ -1.58
HSP30YCR021C RPA14P50106 137 aa5.21□□□□□ -1.58
HSP30YCR021C YDL144CQ07589 356 aa5.21□□□□□ -1.58
HSP30YCR021C INP54Q08227 384 aaKnown RBP5.21□□□□□ -1.58
HSP30YCR021C HSP104P31539 908 aaKnown RBP5.2□□□□□ -1.58
HSP30YCR021C YKR075CP36155 307 aa5.2□□□□□ -1.58
HSP30YCR021C NPR2P39923 615 aa5.2□□□□□ -1.58
HSP30YCR021C RRD1P40454 393 aaKnown RBP5.2□□□□□ -1.58
HSP30YCR021C YMR074CQ04773 145 aa5.2□□□□□ -1.58
HSP30YCR021C YPR097WQ06839 1073 aa5.2□□□□□ -1.58
HSP30YCR021C RTT109Q07794 436 aa5.2□□□□□ -1.58
HSP30YCR021C ALR1Q08269 859 aa5.2□□□□□ -1.58
HSP30YCR021C AIM7Q12156 149 aa5.2□□□□□ -1.58
HSP30YCR021C SUI2P20459 304 aaKnown RBP5.19□□□□□ -1.58
HSP30YCR021C AFT1P22149 690 aa5.19□□□□□ -1.58
HSP30YCR021C PRD1P25375 712 aa5.19□□□□□ -1.58
HSP30YCR021C GAR1P28007 205 aaKnown RBP5.19□□□□□ -1.58
HSP30YCR021C SCT1P32784 759 aa5.19□□□□□ -1.58
HSP30YCR021C PRS1P32895 427 aaKnown RBP5.19□□□□□ -1.58
HSP30YCR021C ENP1P38333 483 aaKnown RBP5.19□□□□□ -1.58
HSP30YCR021C SAP155P43612 1002 aa5.19□□□□□ -1.58
HSP30YCR021C HST3P53687 447 aa5.19□□□□□ -1.58
HSP30YCR021C NUP145P49687 1317 aa5.19□□□□□ -1.58
HSP30YCR021C SIR4P11978 1358 aa5.18□□□□□ -1.58
HSP30YCR021C KTR1P27810 393 aaKnown RBP5.18□□□□□ -1.58
HSP30YCR021C NTH2P35172 780 aa5.18□□□□□ -1.58
HSP30YCR021C YBR287WP38355 427 aa5.18□□□□□ -1.58
HSP30YCR021C LYS4P49367 693 aaPredicted RBP5.18□□□□□ -1.58
HSP30YCR021C SYH1Q02875 849 aaKnown RBP5.18□□□□□ -1.58
HSP30YCR021C FKS3Q04952 1785 aa5.17□□□□□ -1.58
HSP30YCR021C OSM1P21375 501 aaKnown RBP5.17□□□□□ -1.58
HSP30YCR021C KIP2P28743 706 aa5.17□□□□□ -1.58
HSP30YCR021C HEF3P53978 1044 aaKnown RBP5.17□□□□□ -1.58
HSP30YCR021C PKH3Q03306 898 aaPredicted RBP5.17□□□□□ -1.58
HSP30YCR021C YRF1-3P0CX14 1859 aa5.17□□□□□ -1.58
HSP30YCR021C YRF1-7P0CX15 1859 aa5.17□□□□□ -1.58
HSP30YCR021C YRF1-6P53819 1859 aa5.17□□□□□ -1.58
HSP30YCR021C CSN12P47130 423 aa5.16□□□□□ -1.58
HSP30YCR021C ALE1Q08548 619 aa5.16□□□□□ -1.58
HSP30YCR021C SNF2P22082 1703 aa5.16□□□□□ -1.58
HSP30YCR021C ARG8P18544 423 aa5.15□□□□□ -1.59
HSP30YCR021C GBP2P25555 427 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
HSP30YCR021C IXR1P33417 597 aa5.15□□□□□ -1.59
HSP30YCR021C RSC30P38781 883 aa5.15□□□□□ -1.59
HSP30YCR021C ZDS2P54786 942 aa5.15□□□□□ -1.59
HSP30YCR021C IOC4Q04213 475 aa5.15□□□□□ -1.59
HSP30YCR021C RVB2Q12464 471 aaKnown RBP5.15□□□□□ -1.59
HSP30YCR021C ROM2P51862 1356 aaKnown RBP5.15□□□□□ -1.59
HSP30YCR021C MET22P32179 357 aa5.14□□□□□ -1.59
HSP30YCR021C RRT14P40470 206 aa5.14□□□□□ -1.59
HSP30YCR021C YPL062WQ02781 134 aa5.14□□□□□ -1.59
HSP30YCR021C RGA2Q06407 1009 aa5.14□□□□□ -1.59
HSP30YCR021C COQ4O13525 335 aa5.13□□□□□ -1.59
HSP30YCR021C YJR115WP47152 169 aa5.13□□□□□ -1.59
HSP30YCR021C CTH1P47976 325 aa5.13□□□□□ -1.59
HSP30YCR021C YGR122WP53272 402 aa5.13□□□□□ -1.59
HSP30YCR021C AOS1Q06624 347 aa5.13□□□□□ -1.59
HSP30YCR021C ATG13Q06628 738 aa5.13□□□□□ -1.59
HSP30YCR021C YNL050CP53952 270 aa5.12□□□□□ -1.59
HSP30YCR021C MEC3Q02574 474 aa5.12□□□□□ -1.59
HSP30YCR021C KIN1P13185 1064 aa5.11□□□□□ -1.59
HSP30YCR021C MRT4P33201 236 aaKnown RBP5.11□□□□□ -1.59
HSP30YCR021C APL2P36000 726 aaPredicted RBP5.11□□□□□ -1.59
HSP30YCR021C YBP2P53169 641 aa5.11□□□□□ -1.59
HSP30YCR021C BMS1Q08965 1183 aaKnown RBP5.11□□□□□ -1.59
HSP30YCR021C RAD4P14736 754 aa5.1□□□□□ -1.59
HSP30YCR021C KCC4P25389 1037 aa5.1□□□□□ -1.59
HSP30YCR021C UGA3P26370 528 aa5.1□□□□□ -1.59
HSP30YCR021C LEO1P38439 464 aa5.1□□□□□ -1.59
HSP30YCR021C VPS27P40343 622 aaKnown RBP5.1□□□□□ -1.59
HSP30YCR021C YDR444WQ04093 687 aa5.1□□□□□ -1.59
HSP30YCR021C DAL5P15365 543 aa5.09□□□□□ -1.59
HSP30YCR021C VAC17P25591 423 aa5.09□□□□□ -1.59
HSP30YCR021C PRP40P33203 583 aaKnown RBP5.09□□□□□ -1.59
HSP30YCR021C YBL086CP38177 466 aa5.09□□□□□ -1.59
HSP30YCR021C BUD27P43573 796 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
HSP30YCR021C YJL181WP46987 611 aa5.09□□□□□ -1.59
HSP30YCR021C ZDS1P50111 915 aaKnown RBP5.09□□□□□ -1.59
HSP30YCR021C SRT1Q03175 343 aa5.09□□□□□ -1.59
HSP30YCR021C LCB5Q06147 687 aaKnown RBP5.09□□□□□ -1.59
HSP30YCR021C RAD59Q12223 238 aa5.09□□□□□ -1.59
HSP30YCR021C SWC3P31376 625 aa5.08□□□□□ -1.6
HSP30YCR021C NOP2P40991 618 aaKnown RBP5.08□□□□□ -1.6
HSP30YCR021C GYP7P48365 746 aa5.08□□□□□ -1.6
HSP30YCR021C CTF4Q01454 927 aa5.08□□□□□ -1.6
HSP30YCR021C CDC45Q08032 650 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms