RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SLM3Q12093 417 aa7.46□□□□□ -1.22
SHM1YBR263W YRF1-2P40105 1681 aa7.45□□□□□ -1.22
SHM1YBR263W PDI1P17967 522 aaKnown RBP7.44□□□□□ -1.22
SHM1YBR263W RSC30P38781 883 aa7.44□□□□□ -1.22
SHM1YBR263W TCB1Q12466 1186 aa7.44□□□□□ -1.22
SHM1YBR263W MLP1Q02455 1875 aaKnown RBP7.44□□□□□ -1.22
SHM1YBR263W TAP42Q04372 366 aa7.43□□□□□ -1.22
SHM1YBR263W GAS4Q08271 471 aa7.43□□□□□ -1.22
SHM1YBR263W SRF1Q12516 437 aa7.43□□□□□ -1.22
SHM1YBR263W AUS1Q08409 1394 aa7.43□□□□□ -1.22
SHM1YBR263W VAC17P25591 423 aa7.43□□□□□ -1.22
SHM1YBR263W KTR1P27810 393 aaKnown RBP7.43□□□□□ -1.22
SHM1YBR263W OPT2Q06593 877 aa7.43□□□□□ -1.22
SHM1YBR263W RSF2P46974 1380 aa7.41□□□□□ -1.22
SHM1YBR263W YEF3P16521 1044 aaKnown RBP7.41□□□□□ -1.22
SHM1YBR263W HIM1Q06674 414 aa7.41□□□□□ -1.22
SHM1YBR263W YIL177CP40434 1758 aa7.4□□□□□ -1.22
SHM1YBR263W YJL225CP40889 1758 aa7.4□□□□□ -1.22
SHM1YBR263W GRX4P32642 244 aa7.4□□□□□ -1.22
SHM1YBR263W ACO2P39533 789 aa7.4□□□□□ -1.22
SHM1YBR263W XKS1P42826 600 aa7.39□□□□□ -1.23
SHM1YBR263W NUP85P46673 744 aa7.39□□□□□ -1.23
SHM1YBR263W CAF120P53836 1060 aa7.39□□□□□ -1.23
SHM1YBR263W YMR074CQ04773 145 aa7.39□□□□□ -1.23
SHM1YBR263W YLR346CQ06139 101 aa7.39□□□□□ -1.23
SHM1YBR263W PKH3Q03306 898 aaPredicted RBP7.38□□□□□ -1.23
SHM1YBR263W AIM7Q12156 149 aa7.38□□□□□ -1.23
SHM1YBR263W SEC3P33332 1336 aaKnown RBP7.38□□□□□ -1.23
SHM1YBR263W DOT5P40553 215 aa7.36□□□□□ -1.23
SHM1YBR263W SPT7P35177 1332 aa7.36□□□□□ -1.23
SHM1YBR263W KAR2P16474 682 aaKnown RBP7.36□□□□□ -1.23
SHM1YBR263W GLY1P37303 387 aaKnown RBP7.36□□□□□ -1.23
SHM1YBR263W YBL086CP38177 466 aa7.36□□□□□ -1.23
SHM1YBR263W URB1P34241 1764 aaKnown RBP7.35□□□□□ -1.23
SHM1YBR263W LEU3P08638 886 aa7.35□□□□□ -1.23
SHM1YBR263W ROM2P51862 1356 aaKnown RBP7.34□□□□□ -1.23
SHM1YBR263W APC1P53886 1748 aa7.34□□□□□ -1.23
SHM1YBR263W ARG8P18544 423 aa7.34□□□□□ -1.23
SHM1YBR263W YKL133CP36066 463 aa7.34□□□□□ -1.23
SHM1YBR263W ENP1P38333 483 aaKnown RBP7.34□□□□□ -1.23
SHM1YBR263W CSN12P47130 423 aa7.34□□□□□ -1.23
SHM1YBR263W FOX2Q02207 900 aaKnown RBP7.34□□□□□ -1.23
SHM1YBR263W YRF1-3P0CX14 1859 aa7.34□□□□□ -1.24
SHM1YBR263W YRF1-7P0CX15 1859 aa7.34□□□□□ -1.24
SHM1YBR263W YRF1-6P53819 1859 aa7.34□□□□□ -1.24
SHM1YBR263W RPO41P13433 1351 aaKnown RBP7.33□□□□□ -1.24
SHM1YBR263W EMW1P42842 904 aaKnown RBP7.32□□□□□ -1.24
SHM1YBR263W AAD14P42884 376 aa7.32□□□□□ -1.24
SHM1YBR263W FKS3Q04952 1785 aa7.32□□□□□ -1.24
SHM1YBR263W SIR4P11978 1358 aa7.32□□□□□ -1.24
SHM1YBR263W ARG82P07250 355 aa7.31□□□□□ -1.24
SHM1YBR263W MIP1P15801 1254 aa7.31□□□□□ -1.24
SHM1YBR263W RPN11P43588 306 aaKnown RBP7.31□□□□□ -1.24
SHM1YBR263W SCW11P53189 542 aa7.31□□□□□ -1.24
SHM1YBR263W TY1A-BLQ12266 440 aa7.31□□□□□ -1.24
SHM1YBR263W FIG4P42837 879 aa7.3□□□□□ -1.24
SHM1YBR263W RRP46P53256 223 aaPredicted RBP7.3□□□□□ -1.24
SHM1YBR263W PAP2P53632 584 aaKnown RBP7.3□□□□□ -1.24
SHM1YBR263W COBP00163 385 aa7.3□□□□□ -1.24
SHM1YBR263W YIR007WP40566 764 aa7.3□□□□□ -1.24
SHM1YBR263W ADE16P54113 591 aaKnown RBP7.3□□□□□ -1.24
SHM1YBR263W DSD1P53095 428 aa7.29□□□□□ -1.24
SHM1YBR263W LSC2P53312 427 aa7.29□□□□□ -1.24
SHM1YBR263W MEC3Q02574 474 aa7.29□□□□□ -1.24
SHM1YBR263W YRF1-4O13559 1382 aa7.29□□□□□ -1.24
SHM1YBR263W YKR075CP36155 307 aa7.28□□□□□ -1.24
SHM1YBR263W AKL1P38080 1108 aaKnown RBP7.28□□□□□ -1.24
SHM1YBR263W NPR2P39923 615 aa7.28□□□□□ -1.24
SHM1YBR263W RAD59Q12223 238 aa7.28□□□□□ -1.24
SHM1YBR263W IOC4Q04213 475 aa7.27□□□□□ -1.25
SHM1YBR263W INP54Q08227 384 aaKnown RBP7.27□□□□□ -1.25
SHM1YBR263W HSP104P31539 908 aaKnown RBP7.26□□□□□ -1.25
SHM1YBR263W YJR098CP47139 656 aa7.26□□□□□ -1.25
SHM1YBR263W UBP1P25037 809 aa7.25□□□□□ -1.25
SHM1YBR263W DLD1P32891 587 aa7.25□□□□□ -1.25
SHM1YBR263W UBP2Q01476 1272 aa7.25□□□□□ -1.25
SHM1YBR263W OSM1P21375 501 aaKnown RBP7.24□□□□□ -1.25
SHM1YBR263W YJL181WP46987 611 aa7.24□□□□□ -1.25
SHM1YBR263W SNF2P22082 1703 aa7.24□□□□□ -1.25
SHM1YBR263W EDE1P34216 1381 aa7.24□□□□□ -1.25
SHM1YBR263W PRP40P33203 583 aaKnown RBP7.24□□□□□ -1.25
SHM1YBR263W LYS4P49367 693 aaPredicted RBP7.24□□□□□ -1.25
SHM1YBR263W YGR035CP53222 116 aa7.24□□□□□ -1.25
SHM1YBR263W CTF4Q01454 927 aa7.24□□□□□ -1.25
SHM1YBR263W NUP145P49687 1317 aa7.23□□□□□ -1.25
SHM1YBR263W TRK2P28584 889 aa7.23□□□□□ -1.25
SHM1YBR263W NTH2P35172 780 aa7.23□□□□□ -1.25
SHM1YBR263W RTR1P40084 226 aaPredicted RBP7.23□□□□□ -1.25
SHM1YBR263W HPF1Q05164 967 aa7.23□□□□□ -1.25
SHM1YBR263W ATG13Q06628 738 aa7.23□□□□□ -1.25
SHM1YBR263W PRD1P25375 712 aa7.22□□□□□ -1.25
SHM1YBR263W MKS1P34072 584 aa7.22□□□□□ -1.25
SHM1YBR263W DFG5Q05031 458 aa7.22□□□□□ -1.25
SHM1YBR263W YPR084WQ06821 456 aa7.22□□□□□ -1.25
SHM1YBR263W TEC1P18412 486 aa7.21□□□□□ -1.26
SHM1YBR263W AOS1Q06624 347 aa7.21□□□□□ -1.26
SHM1YBR263W MPP10P47083 593 aaKnown RBP7.2□□□□□ -1.26
SHM1YBR263W CTH1P47976 325 aa7.19□□□□□ -1.26
SHM1YBR263W THI22Q06490 572 aa7.19□□□□□ -1.26
SHM1YBR263W YDL144CQ07589 356 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms