RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeast

Gene SHG1, Length 429 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHG1	YBR258C	AHP1	P38013	176 aa	Known RBP	5.03	□□□□□ -1.6
SHG1	YBR258C	STM1	P39015	273 aa	Known RBP	5.03	□□□□□ -1.6
SHG1	YBR258C	CHD1	P32657	1468 aa		5.02	□□□□□ -1.61
SHG1	YBR258C	UFD4	P33202	1483 aa		5.02	□□□□□ -1.61
SHG1	YBR258C	MLF3	P32047	452 aa		5.02	□□□□□ -1.61
SHG1	YBR258C	IRE1	P32361	1115 aa		5.02	□□□□□ -1.61
SHG1	YBR258C	ALA1	P40825	983 aa	Known RBP	5.02	□□□□□ -1.61
SHG1	YBR258C	SPR3	P41901	512 aa		5.02	□□□□□ -1.61
SHG1	YBR258C	FOX2	Q02207	900 aa	Known RBP	5.02	□□□□□ -1.61
SHG1	YBR258C	CDC19	P00549	500 aa	Known RBP	5.01	□□□□□ -1.61
SHG1	YBR258C	LEU1	P07264	779 aa	Known RBP	5.01	□□□□□ -1.61
SHG1	YBR258C	PDC6	P26263	563 aa	Known RBP	5.01	□□□□□ -1.61
SHG1	YBR258C	QDR1	P40475	563 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	UBP15	P50101	1230 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	UBP2	Q01476	1272 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	YLR346C	Q06139	101 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	OPT2	Q06593	877 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	PSH1	Q12161	406 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	TCB1	Q12466	1186 aa		5.01	□□□□□ -1.61
SHG1	YBR258C	SEC20	P28791	383 aa		5	□□□□□ -1.61
SHG1	YBR258C	GLO3	P38682	493 aa	Known RBP	5	□□□□□ -1.61
SHG1	YBR258C	PPX1	P38698	397 aa		5	□□□□□ -1.61
SHG1	YBR258C	ALD2	P47771	506 aa		5	□□□□□ -1.61
SHG1	YBR258C	LCB5	Q06147	687 aa	Known RBP	5	□□□□□ -1.61
SHG1	YBR258C	Q0182	Q9ZZW1	134 aa		5	□□□□□ -1.61
SHG1	YBR258C	RPC31	P17890	251 aa		4.99	□□□□□ -1.61
SHG1	YBR258C	RPB10	P22139	70 aa		4.99	□□□□□ -1.61
SHG1	YBR258C	VMA3	P25515	160 aa		4.99	□□□□□ -1.61
SHG1	YBR258C	GRS1	P38088	690 aa	Known RBP	4.99	□□□□□ -1.61
SHG1	YBR258C	YTA6	P40328	754 aa		4.99	□□□□□ -1.61
SHG1	YBR258C	NUT2	Q06213	157 aa		4.99	□□□□□ -1.61
SHG1	YBR258C	MSC6	Q08818	692 aa	Known RBP	4.99	□□□□□ -1.61
SHG1	YBR258C	TY1A-BL	Q12266	440 aa		4.99	□□□□□ -1.61
SHG1	YBR258C	YHL050C	P38721	697 aa		4.98	□□□□□ -1.61
SHG1	YBR258C	YHR219W	P38900	624 aa		4.98	□□□□□ -1.61
SHG1	YBR258C	SKP1	P52286	194 aa		4.98	□□□□□ -1.61
SHG1	YBR258C	UFD2	P54860	961 aa		4.98	□□□□□ -1.61
SHG1	YBR258C	MET22	P32179	357 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	KAP122	P32767	1081 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	OSH7	P38755	437 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	DYS1	P38791	387 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	SCW11	P53189	542 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	TRS120	Q04183	1289 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	FRT1	Q99332	602 aa		4.97	□□□□□ -1.61
SHG1	YBR258C	HEM3	P28789	327 aa		4.96	□□□□□ -1.62
SHG1	YBR258C	LDH1	P38139	375 aa		4.96	□□□□□ -1.62
SHG1	YBR258C	QDR2	P40474	542 aa		4.96	□□□□□ -1.62
SHG1	YBR258C	HXT8	P40886	569 aa		4.96	□□□□□ -1.62
SHG1	YBR258C	MNL2	Q12205	849 aa		4.96	□□□□□ -1.62
SHG1	YBR258C	RGP1	P16664	663 aa		4.95	□□□□□ -1.62
SHG1	YBR258C	SMC1	P32908	1225 aa		4.95	□□□□□ -1.62
SHG1	YBR258C	NAM8	Q00539	523 aa	Known RBP	4.95	□□□□□ -1.62
SHG1	YBR258C	YDR444W	Q04093	687 aa		4.95	□□□□□ -1.62
SHG1	YBR258C	YOR296W	Q08748	1289 aa		4.95	□□□□□ -1.62
SHG1	YBR258C	MSN1	P22148	382 aa		4.94	□□□□□ -1.62
SHG1	YBR258C	IPL1	P38991	367 aa		4.94	□□□□□ -1.62
SHG1	YBR258C	RGA1	P39083	1007 aa		4.94	□□□□□ -1.62
SHG1	YBR258C	ACO2	P39533	789 aa		4.94	□□□□□ -1.62
SHG1	YBR258C	NTA1	P40354	457 aa		4.94	□□□□□ -1.62
SHG1	YBR258C	WHI5	Q12416	295 aa		4.94	□□□□□ -1.62
SHG1	YBR258C	YRF1-1	P0CX20	1796 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	YRF1-5	P0CX21	1796 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	YRF1-8	P0CX22	1796 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	RPP1A	P05318	106 aa	Predicted RBP	4.93	□□□□□ -1.62
SHG1	YBR258C	SUT1	P53032	299 aa	Known RBP	4.93	□□□□□ -1.62
SHG1	YBR258C	MTO1	P53070	669 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	CUS1	Q02554	436 aa	Predicted RBP	4.93	□□□□□ -1.62
SHG1	YBR258C	TY1A-MR1	Q04215	440 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	RRP15	Q06511	250 aa	Predicted RBP	4.93	□□□□□ -1.62
SHG1	YBR258C	GPI13	Q07830	1017 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	TY1B-BR	Q12193	1756 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	TY1B-GR3	Q12316	1755 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	TY1B-OR	Q92393	1755 aa		4.93	□□□□□ -1.62
SHG1	YBR258C	NTE1	Q04958	1679 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	CCP1	P00431	361 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	ASF1	P32447	279 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	ISW1	P38144	1129 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	GIP1	P38229	639 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	RGD2	P43556	714 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	ROG3	P43602	733 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	RSC4	Q02206	625 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	PAN1	P32521	1480 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	YPK9	Q12697	1472 aa		4.92	□□□□□ -1.62
SHG1	YBR258C	MET4	P32389	672 aa		4.91	□□□□□ -1.62
SHG1	YBR258C	BSD2	P38356	321 aa		4.91	□□□□□ -1.62
SHG1	YBR258C	CDC55	Q00362	526 aa		4.91	□□□□□ -1.62
SHG1	YBR258C	YDR461C-A	Q2V2P7	80 aa		4.91	□□□□□ -1.62
SHG1	YBR258C	DIT1	P21623	536 aa		4.9	□□□□□ -1.63
SHG1	YBR258C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
SHG1	YBR258C	IRS4	P36115	615 aa	Known RBP	4.9	□□□□□ -1.63
SHG1	YBR258C	RAD55	P38953	406 aa		4.9	□□□□□ -1.63
SHG1	YBR258C	YER156C	P40093	338 aa	Known RBP	4.9	□□□□□ -1.63
SHG1	YBR258C	ITC1	P53125	1264 aa		4.9	□□□□□ -1.63
SHG1	YBR258C	VPS15	P22219	1454 aa		4.89	□□□□□ -1.63
SHG1	YBR258C	MRPL16	P38064	232 aa		4.89	□□□□□ -1.63
SHG1	YBR258C	YBR287W	P38355	427 aa		4.89	□□□□□ -1.63
SHG1	YBR258C	APM2	P38700	605 aa		4.89	□□□□□ -1.63
SHG1	YBR258C	FIR1	P40020	876 aa		4.89	□□□□□ -1.63
SHG1	YBR258C	PSY2	P40164	858 aa		4.89	□□□□□ -1.63
SHG1	YBR258C	YNL011C	P53980	444 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms