RNA–Protein interactions for RNA: YBR074W

PFF1, Transcript of Multi-spanning vacuolar membrane protease, yeastyeast

Gene PFF1, Length 2,931 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFF1YBR074W SRC1Q03707 834 aa3.45□□□□□ -1.86
PFF1YBR074W MCM16Q12262 181 aa3.45□□□□□ -1.86
PFF1YBR074W NOT3P06102 836 aaKnown RBP3.44□□□□□ -1.86
PFF1YBR074W MRT4P33201 236 aaKnown RBP3.44□□□□□ -1.86
PFF1YBR074W APP1P53933 587 aa3.44□□□□□ -1.86
PFF1YBR074W YRF1-1P0CX20 1796 aa3.44□□□□□ -1.86
PFF1YBR074W YRF1-5P0CX21 1796 aa3.44□□□□□ -1.86
PFF1YBR074W YRF1-8P0CX22 1796 aa3.44□□□□□ -1.86
PFF1YBR074W ROX1P25042 368 aa3.44□□□□□ -1.86
PFF1YBR074W VPS27P40343 622 aaKnown RBP3.44□□□□□ -1.86
PFF1YBR074W EMW1P42842 904 aaKnown RBP3.44□□□□□ -1.86
PFF1YBR074W MSB3P48566 633 aaPredicted RBP3.44□□□□□ -1.86
PFF1YBR074W FRA1Q07825 749 aa3.44□□□□□ -1.86
PFF1YBR074W SIR4P11978 1358 aa3.44□□□□□ -1.86
PFF1YBR074W EMP47P43555 445 aa3.43□□□□□ -1.86
PFF1YBR074W BDS1Q08347 646 aa3.43□□□□□ -1.86
PFF1YBR074W YDJ1P25491 409 aaKnown RBP3.43□□□□□ -1.86
PFF1YBR074W TBS1P38114 1094 aa3.43□□□□□ -1.86
PFF1YBR074W YJR115WP47152 169 aa3.43□□□□□ -1.86
PFF1YBR074W ATG20Q07528 640 aa3.43□□□□□ -1.86
PFF1YBR074W BIO2P32451 375 aa3.43□□□□□ -1.86
PFF1YBR074W MNN4P36044 1178 aa3.43□□□□□ -1.86
PFF1YBR074W EAF7P53911 425 aaKnown RBP3.43□□□□□ -1.86
PFF1YBR074W SEC7P11075 2009 aaKnown RBP3.42□□□□□ -1.86
PFF1YBR074W RTG2P32608 588 aaKnown RBP3.42□□□□□ -1.86
PFF1YBR074W PIL1P53252 339 aaKnown RBP3.42□□□□□ -1.86
PFF1YBR074W DFG5Q05031 458 aa3.42□□□□□ -1.86
PFF1YBR074W RPC31P17890 251 aa3.42□□□□□ -1.86
PFF1YBR074W DLD3P39976 496 aaKnown RBP3.42□□□□□ -1.86
PFF1YBR074W PTK2P47116 818 aaKnown RBP3.42□□□□□ -1.86
PFF1YBR074W SUP45P12385 437 aaKnown RBP3.41□□□□□ -1.86
PFF1YBR074W DAT1P13483 248 aaKnown RBP3.41□□□□□ -1.86
PFF1YBR074W GAR1P28007 205 aaKnown RBP3.41□□□□□ -1.86
PFF1YBR074W ISF1P32488 338 aa3.41□□□□□ -1.86
PFF1YBR074W YBL086CP38177 466 aa3.41□□□□□ -1.86
PFF1YBR074W ATG32P40458 529 aa3.41□□□□□ -1.86
PFF1YBR074W YPR204WQ08995 1032 aa3.41□□□□□ -1.86
PFF1YBR074W NUP85P46673 744 aa3.41□□□□□ -1.86
PFF1YBR074W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
PFF1YBR074W ITT1Q04638 464 aa3.41□□□□□ -1.86
PFF1YBR074W ENO2P00925 437 aaKnown RBP3.4□□□□□ -1.86
PFF1YBR074W TIF1P10081 395 aaKnown RBP3.4□□□□□ -1.86
PFF1YBR074W RIX1P38883 763 aaPredicted RBP3.4□□□□□ -1.86
PFF1YBR074W FBP26P32604 452 aa3.4□□□□□ -1.87
PFF1YBR074W LSC2P53312 427 aa3.4□□□□□ -1.87
PFF1YBR074W UTP13Q05946 817 aaKnown RBP3.4□□□□□ -1.87
PFF1YBR074W YPR084WQ06821 456 aa3.4□□□□□ -1.87
PFF1YBR074W PAF1P38351 445 aa3.4□□□□□ -1.87
PFF1YBR074W YFL034WP43564 1073 aa3.4□□□□□ -1.87
PFF1YBR074W UTR2P32623 467 aa3.39□□□□□ -1.87
PFF1YBR074W SOH1P38633 127 aa3.39□□□□□ -1.87
PFF1YBR074W ISR1Q06098 443 aaKnown RBP3.39□□□□□ -1.87
PFF1YBR074W AAD14P42884 376 aa3.39□□□□□ -1.87
PFF1YBR074W ISU1Q03020 165 aa3.39□□□□□ -1.87
PFF1YBR074W YDR444WQ04093 687 aa3.38□□□□□ -1.87
PFF1YBR074W YRF1-2P40105 1681 aa3.38□□□□□ -1.87
PFF1YBR074W MIP1P15801 1254 aa3.38□□□□□ -1.87
PFF1YBR074W YGR130CP53278 816 aa3.38□□□□□ -1.87
PFF1YBR074W UBP2Q01476 1272 aa3.38□□□□□ -1.87
PFF1YBR074W URB1P34241 1764 aaKnown RBP3.38□□□□□ -1.87
PFF1YBR074W MET22P32179 357 aa3.37□□□□□ -1.87
PFF1YBR074W SLN1P39928 1220 aaPredicted RBP3.37□□□□□ -1.87
PFF1YBR074W RIM21P48565 533 aa3.37□□□□□ -1.87
PFF1YBR074W NOP7P53261 605 aaKnown RBP3.37□□□□□ -1.87
PFF1YBR074W ENO1P00924 437 aaKnown RBP3.37□□□□□ -1.87
PFF1YBR074W STE6P12866 1290 aa3.37□□□□□ -1.87
PFF1YBR074W PCT1P13259 424 aa3.37□□□□□ -1.87
PFF1YBR074W BUD27P43573 796 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
PFF1YBR074W BCK1Q01389 1478 aa3.37□□□□□ -1.87
PFF1YBR074W TY1B-NL2Q99337 1749 aaKnown RBP3.37□□□□□ -1.87
PFF1YBR074W MSP1P28737 362 aa3.37□□□□□ -1.87
PFF1YBR074W PDS5Q04264 1277 aa3.37□□□□□ -1.87
PFF1YBR074W VPS24P36095 224 aaKnown RBP3.36□□□□□ -1.87
PFF1YBR074W SPT2P06843 333 aaPredicted RBP3.36□□□□□ -1.87
PFF1YBR074W KTR7P40504 517 aa3.36□□□□□ -1.87
PFF1YBR074W SCW11P53189 542 aa3.36□□□□□ -1.87
PFF1YBR074W RVB2Q12464 471 aaKnown RBP3.36□□□□□ -1.87
PFF1YBR074W AUS1Q08409 1394 aa3.35□□□□□ -1.87
PFF1YBR074W ALA1P40825 983 aaKnown RBP3.35□□□□□ -1.87
PFF1YBR074W LCB5Q06147 687 aaKnown RBP3.35□□□□□ -1.87
PFF1YBR074W WTM2Q12206 467 aa3.35□□□□□ -1.87
PFF1YBR074W RAD9P14737 1309 aa3.35□□□□□ -1.87
PFF1YBR074W DRS2P39524 1355 aa3.35□□□□□ -1.87
PFF1YBR074W DLD1P32891 587 aa3.35□□□□□ -1.87
PFF1YBR074W GLY1P37303 387 aaKnown RBP3.35□□□□□ -1.87
PFF1YBR074W MRX10Q05648 414 aa3.35□□□□□ -1.87
PFF1YBR074W DUR1,2P32528 1835 aaKnown RBP3.35□□□□□ -1.87
PFF1YBR074W UTP10P42945 1769 aaKnown RBP3.34□□□□□ -1.87
PFF1YBR074W HYR1P40581 163 aaKnown RBP3.34□□□□□ -1.87
PFF1YBR074W HDA3Q06623 655 aa3.34□□□□□ -1.87
PFF1YBR074W AIM44Q99299 758 aa3.34□□□□□ -1.87
PFF1YBR074W KRE5P22023 1365 aa3.34□□□□□ -1.87
PFF1YBR074W FPR3P38911 411 aaKnown RBP3.34□□□□□ -1.87
PFF1YBR074W OPT2Q06593 877 aa3.34□□□□□ -1.87
PFF1YBR074W ROM2P51862 1356 aaKnown RBP3.34□□□□□ -1.87
PFF1YBR074W MPE1P35728 441 aaKnown RBP3.33□□□□□ -1.88
PFF1YBR074W YFR016CP43597 1233 aaKnown RBP3.33□□□□□ -1.88
PFF1YBR074W APL6P46682 809 aa3.33□□□□□ -1.88
PFF1YBR074W YJR098CP47139 656 aa3.33□□□□□ -1.88
PFF1YBR074W NOP58Q12499 511 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms