RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W ARP1P38696 384 aa1.26□□□□□ -2.21
UTP20YBL004W TSR3Q12094 313 aaKnown RBP1.26□□□□□ -2.21
UTP20YBL004W MMF1P40185 145 aaKnown RBP1.26□□□□□ -2.21
UTP20YBL004W CAF20P12962 161 aaKnown RBP1.26□□□□□ -2.21
UTP20YBL004W ASH1P34233 588 aa1.26□□□□□ -2.21
UTP20YBL004W YKL050CP35736 922 aa1.26□□□□□ -2.21
UTP20YBL004W MSB3P48566 633 aaPredicted RBP1.26□□□□□ -2.21
UTP20YBL004W RIM4P38741 713 aa1.26□□□□□ -2.21
UTP20YBL004W YNL034WP53963 612 aa1.26□□□□□ -2.21
UTP20YBL004W YNL018CP53976 612 aa1.26□□□□□ -2.21
UTP20YBL004W SYF1Q04048 859 aaPredicted RBP1.26□□□□□ -2.21
UTP20YBL004W IRC10Q08118 586 aa1.26□□□□□ -2.21
UTP20YBL004W SPT2P06843 333 aaPredicted RBP1.25□□□□□ -2.21
UTP20YBL004W TIF1P10081 395 aaKnown RBP1.25□□□□□ -2.21
UTP20YBL004W KSP1P38691 1029 aaKnown RBP1.25□□□□□ -2.21
UTP20YBL004W RSM26P47141 266 aa1.25□□□□□ -2.21
UTP20YBL004W HOP09932 586 aa1.25□□□□□ -2.21
UTP20YBL004W JIP4Q03361 876 aa1.25□□□□□ -2.21
UTP20YBL004W YOR389WQ08912 624 aa1.25□□□□□ -2.21
UTP20YBL004W YPL278CQ08990 100 aa1.25□□□□□ -2.21
UTP20YBL004W PRI2P20457 528 aa1.25□□□□□ -2.21
UTP20YBL004W PCA1P38360 1216 aa1.25□□□□□ -2.21
UTP20YBL004W UBP16Q02863 499 aa1.25□□□□□ -2.21
UTP20YBL004W MET7Q08645 548 aa1.25□□□□□ -2.21
UTP20YBL004W XKS1P42826 600 aa1.25□□□□□ -2.21
UTP20YBL004W IRE1P32361 1115 aa1.25□□□□□ -2.21
UTP20YBL004W FOL2P51601 243 aaKnown RBP1.25□□□□□ -2.21
UTP20YBL004W VID30P53076 958 aa1.25□□□□□ -2.21
UTP20YBL004W YOL036WQ08206 761 aa1.25□□□□□ -2.21
UTP20YBL004W FRD1P32614 470 aaKnown RBP1.24□□□□□ -2.21
UTP20YBL004W JHD1P40034 492 aa1.24□□□□□ -2.21
UTP20YBL004W ATH1P48016 1211 aa1.24□□□□□ -2.21
UTP20YBL004W CDC60P26637 1090 aaKnown RBP1.24□□□□□ -2.21
UTP20YBL004W VAB2P40003 282 aa1.24□□□□□ -2.21
UTP20YBL004W FLO11P08640 1367 aa1.24□□□□□ -2.21
UTP20YBL004W RGT1P32862 1170 aa1.24□□□□□ -2.21
UTP20YBL004W YJL171CP46992 396 aa1.24□□□□□ -2.21
UTP20YBL004W YOL024WQ08172 172 aa1.24□□□□□ -2.21
UTP20YBL004W GAP1P19145 602 aaPredicted RBP1.24□□□□□ -2.21
UTP20YBL004W NUM1Q00402 2748 aa1.24□□□□□ -2.21
UTP20YBL004W GUA1P38625 525 aaKnown RBP1.23□□□□□ -2.21
UTP20YBL004W YNL035CP53962 389 aaKnown RBP1.23□□□□□ -2.21
UTP20YBL004W HCR1Q05775 265 aaKnown RBP1.23□□□□□ -2.21
UTP20YBL004W SGD1Q06132 899 aa1.23□□□□□ -2.21
UTP20YBL004W NAB2P32505 525 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
UTP20YBL004W UIP5P36137 443 aa1.23□□□□□ -2.21
UTP20YBL004W ACK1Q07622 623 aaPredicted RBP1.23□□□□□ -2.21
UTP20YBL004W SAS10Q12136 610 aaPredicted RBP1.23□□□□□ -2.21
UTP20YBL004W SMY1P32364 656 aaKnown RBP1.23□□□□□ -2.21
UTP20YBL004W BDF2Q07442 638 aa1.23□□□□□ -2.21
UTP20YBL004W BIO2P32451 375 aa1.23□□□□□ -2.21
UTP20YBL004W SPT21P35209 758 aa1.23□□□□□ -2.21
UTP20YBL004W UBS1P38290 277 aa1.23□□□□□ -2.21
UTP20YBL004W LIF1P53150 421 aa1.23□□□□□ -2.21
UTP20YBL004W TAF8Q03750 510 aa1.23□□□□□ -2.21
UTP20YBL004W SEC3P33332 1336 aaKnown RBP1.23□□□□□ -2.21
UTP20YBL004W SNA3P14359 133 aa1.23□□□□□ -2.21
UTP20YBL004W IMG2P25642 146 aaPredicted RBP1.23□□□□□ -2.21
UTP20YBL004W PAM1P37304 830 aaKnown RBP1.23□□□□□ -2.21
UTP20YBL004W IOC3P43596 787 aa1.23□□□□□ -2.21
UTP20YBL004W PPH3P32345 308 aa1.23□□□□□ -2.21
UTP20YBL004W BRN1P38170 754 aa1.23□□□□□ -2.21
UTP20YBL004W RPL17AP05740 184 aaKnown RBP1.22□□□□□ -2.21
UTP20YBL004W MAF1P41910 395 aa1.22□□□□□ -2.21
UTP20YBL004W RPL17BP46990 184 aaKnown RBP1.22□□□□□ -2.21
UTP20YBL004W YGR266WP53326 701 aa1.22□□□□□ -2.21
UTP20YBL004W RRG1Q12167 365 aaPredicted RBP1.22□□□□□ -2.21
UTP20YBL004W PKC1P24583 1151 aa1.22□□□□□ -2.21
UTP20YBL004W SFP1P32432 683 aa1.22□□□□□ -2.21
UTP20YBL004W RDH54P38086 958 aa1.22□□□□□ -2.21
UTP20YBL004W IRC3Q06683 689 aa1.22□□□□□ -2.21
UTP20YBL004W AFT1P22149 690 aa1.22□□□□□ -2.21
UTP20YBL004W NPL4P33755 580 aa1.22□□□□□ -2.21
UTP20YBL004W AIR2Q12476 344 aaKnown RBP1.22□□□□□ -2.21
UTP20YBL004W SEG2P34250 1132 aa1.22□□□□□ -2.21
UTP20YBL004W YPT35P38815 214 aaKnown RBP1.22□□□□□ -2.21
UTP20YBL004W PHR1P05066 565 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21not detected
UTP20YBL004W SAC3P46674 1301 aa1.22□□□□□ -2.21
UTP20YBL004W PUS6P53294 404 aa1.22□□□□□ -2.21
UTP20YBL004W SND1Q04007 877 aa1.22□□□□□ -2.21
UTP20YBL004W PPM2Q08282 695 aa1.22□□□□□ -2.21
UTP20YBL004W CKB1P43639 278 aa1.22□□□□□ -2.21
UTP20YBL004W HAL5P38970 855 aaKnown RBP1.21□□□□□ -2.22
UTP20YBL004W UTP7P40055 554 aaKnown RBP1.21□□□□□ -2.22
UTP20YBL004W MSH4P40965 878 aaPredicted RBP1.21□□□□□ -2.22
UTP20YBL004W NUP84P52891 726 aa1.21□□□□□ -2.22
UTP20YBL004W MET13P53128 600 aa1.21□□□□□ -2.22
UTP20YBL004W NHA1Q99271 985 aa1.21□□□□□ -2.22
UTP20YBL004W HOM2P13663 365 aaKnown RBP1.21□□□□□ -2.22
UTP20YBL004W SPB4P25808 606 aaPredicted RBP1.21□□□□□ -2.22
UTP20YBL004W LIP5P32875 414 aa1.21□□□□□ -2.22
UTP20YBL004W PIM1P36775 1133 aa1.21□□□□□ -2.22
UTP20YBL004W KTR4P38131 464 aa1.21□□□□□ -2.22
UTP20YBL004W UME6P39001 836 aa1.21□□□□□ -2.22
UTP20YBL004W ROM1P53046 1155 aa1.21□□□□□ -2.22
UTP20YBL004W HEH2Q03281 663 aa1.21□□□□□ -2.22
UTP20YBL004W GPR1Q12361 961 aa1.21□□□□□ -2.22
UTP20YBL004W TOR1P35169 2470 aa1.21□□□□□ -2.22
UTP20YBL004W GPB2P39717 880 aa1.21□□□□□ -2.22
UTP20YBL004W PTI1P39927 425 aaPredicted RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms