RNA–Protein interactions for RNA: YAL048C

GEM1, Transcript of Outer mitochondrial membrane GTPase, subunit of the ERMES complex, yeast

Gene GEM1, Length 1,989 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEM1	YAL048C	MSN5	P52918	1224 aa		5.42	□□□□□ -1.54
GEM1	YAL048C	MNL2	Q12205	849 aa		5.42	□□□□□ -1.54
GEM1	YAL048C	RPS31	P05759	152 aa	Known RBP	5.42	□□□□□ -1.54
GEM1	YAL048C	UTP4	Q06679	776 aa	Known RBP	5.42	□□□□□ -1.54
GEM1	YAL048C	TY1A-DR3	Q12441	440 aa		5.42	□□□□□ -1.54
GEM1	YAL048C	UFD2	P54860	961 aa		5.41	□□□□□ -1.54
GEM1	YAL048C	NOP7	P53261	605 aa	Known RBP	5.4	□□□□□ -1.54
GEM1	YAL048C	STB3	Q12427	513 aa		5.4	□□□□□ -1.54
GEM1	YAL048C	SLA1	P32790	1244 aa		5.4	□□□□□ -1.55
GEM1	YAL048C	QDR2	P40474	542 aa		5.4	□□□□□ -1.55
GEM1	YAL048C	HXT8	P40886	569 aa		5.4	□□□□□ -1.55
GEM1	YAL048C	SRF1	Q12516	437 aa		5.4	□□□□□ -1.55
GEM1	YAL048C	YJR098C	P47139	656 aa		5.39	□□□□□ -1.55
GEM1	YAL048C	IRE1	P32361	1115 aa		5.38	□□□□□ -1.55
GEM1	YAL048C	AHP1	P38013	176 aa	Known RBP	5.38	□□□□□ -1.55
GEM1	YAL048C	PHO4	P07270	312 aa	Known RBP	5.38	□□□□□ -1.55
GEM1	YAL048C	LDH1	P38139	375 aa		5.38	□□□□□ -1.55
GEM1	YAL048C	MDS3	P53094	1487 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	DAL1	P32375	460 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	SEC8	P32855	1065 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	DYS1	P38791	387 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	NUP85	P46673	744 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	VTC4	P47075	721 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	YJR107W	P47145	328 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	PSH1	Q12161	406 aa		5.37	□□□□□ -1.55
GEM1	YAL048C	MSN1	P22148	382 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	PDC6	P26263	563 aa	Known RBP	5.36	□□□□□ -1.55
GEM1	YAL048C	SMC1	P32908	1225 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	YTA6	P40328	754 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	OYE2	Q03558	400 aa	Known RBP	5.36	□□□□□ -1.55
GEM1	YAL048C	REV3	P14284	1504 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	MGE1	P38523	228 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	RGD2	P43556	714 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	LSC2	P53312	427 aa		5.36	□□□□□ -1.55
GEM1	YAL048C	KAP122	P32767	1081 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	RAD55	P38953	406 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	MTO1	P53070	669 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	YNL011C	P53980	444 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	CDC55	Q00362	526 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	TCB1	Q12466	1186 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	RPC31	P17890	251 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
GEM1	YAL048C	RPT1	P33299	467 aa	Known RBP	5.35	□□□□□ -1.55
GEM1	YAL048C	MET1	P36150	593 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	BSD2	P38356	321 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	RGA1	P39083	1007 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	MET10	P39692	1035 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	FYV10	P40492	516 aa		5.35	□□□□□ -1.55
GEM1	YAL048C	LEU1	P07264	779 aa	Known RBP	5.34	□□□□□ -1.55
GEM1	YAL048C	TRK1	P12685	1235 aa		5.34	□□□□□ -1.55
GEM1	YAL048C	NTA1	P40354	457 aa		5.34	□□□□□ -1.55
GEM1	YAL048C	DAK2	P43550	591 aa		5.34	□□□□□ -1.55
GEM1	YAL048C	SRC1	Q03707	834 aa		5.34	□□□□□ -1.55
GEM1	YAL048C	TIF6	Q12522	245 aa	Known RBP	5.34	□□□□□ -1.55
GEM1	YAL048C	RSC4	Q02206	625 aa		5.33	□□□□□ -1.56
GEM1	YAL048C	HIR3	P47171	1648 aa		5.33	□□□□□ -1.56
GEM1	YAL048C	YOR296W	Q08748	1289 aa		5.33	□□□□□ -1.56
GEM1	YAL048C	MCM2	P29469	868 aa		5.32	□□□□□ -1.56
GEM1	YAL048C	FIR1	P40020	876 aa		5.32	□□□□□ -1.56
GEM1	YAL048C	GCD6	P32501	712 aa	Known RBP	5.31	□□□□□ -1.56
GEM1	YAL048C	IRS4	P36115	615 aa	Known RBP	5.31	□□□□□ -1.56
GEM1	YAL048C	GIP1	P38229	639 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	PSY2	P40164	858 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	CUS1	Q02554	436 aa	Predicted RBP	5.31	□□□□□ -1.56
GEM1	YAL048C	BSC2	Q05611	235 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	CDC19	P00549	500 aa	Known RBP	5.31	□□□□□ -1.56
GEM1	YAL048C	ISW1	P38144	1129 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	UBP15	P50101	1230 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	SAM37	P50110	327 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	SPR28	Q04921	423 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	TOS4	Q06266	489 aa		5.31	□□□□□ -1.56
GEM1	YAL048C	RGP1	P16664	663 aa		5.3	□□□□□ -1.56
GEM1	YAL048C	VPS35	P34110	944 aa		5.3	□□□□□ -1.56
GEM1	YAL048C	BRE2	P43132	505 aa		5.3	□□□□□ -1.56
GEM1	YAL048C	SKP1	P52286	194 aa		5.29	□□□□□ -1.56
GEM1	YAL048C	OPT2	Q06593	877 aa		5.29	□□□□□ -1.56
GEM1	YAL048C	NOC3	Q07896	663 aa	Predicted RBP	5.29	□□□□□ -1.56
GEM1	YAL048C	CIC1	P38779	376 aa	Known RBP	5.28	□□□□□ -1.56
GEM1	YAL048C	ITC1	P53125	1264 aa		5.28	□□□□□ -1.56
GEM1	YAL048C	UBP2	Q01476	1272 aa		5.28	□□□□□ -1.56
GEM1	YAL048C	SVF1	Q05515	481 aa		5.28	□□□□□ -1.56
GEM1	YAL048C	EMG1	Q06287	252 aa	Known RBP	5.28	□□□□□ -1.56
GEM1	YAL048C	INP54	Q08227	384 aa	Known RBP	5.27	□□□□□ -1.57
GEM1	YAL048C	PEP1	P32319	1579 aa		5.27	□□□□□ -1.57
GEM1	YAL048C	AIM46	P38885	310 aa		5.27	□□□□□ -1.57
GEM1	YAL048C	RPS26A	P39938	119 aa	Known RBP	5.27	□□□□□ -1.57
GEM1	YAL048C	RPS26B	P39939	119 aa	Known RBP	5.27	□□□□□ -1.57
GEM1	YAL048C	YNR040W	P53736	256 aa		5.27	□□□□□ -1.57
GEM1	YAL048C	CTR9	P89105	1077 aa		5.27	□□□□□ -1.57
GEM1	YAL048C	BPT1	P14772	1559 aa		5.26	□□□□□ -1.57
GEM1	YAL048C	COB	P00163	385 aa		5.26	□□□□□ -1.57
GEM1	YAL048C	MRPL16	P38064	232 aa		5.26	□□□□□ -1.57
GEM1	YAL048C	OSH7	P38755	437 aa		5.26	□□□□□ -1.57
GEM1	YAL048C	FAA3	P39002	694 aa		5.26	□□□□□ -1.57
GEM1	YAL048C	NAM8	Q00539	523 aa	Known RBP	5.26	□□□□□ -1.57
GEM1	YAL048C	JIP5	Q06214	492 aa	Predicted RBP	5.26	□□□□□ -1.57
GEM1	YAL048C	FLP1	P03870	423 aa		5.25	□□□□□ -1.57
GEM1	YAL048C	GLY1	P37303	387 aa	Known RBP	5.25	□□□□□ -1.57
GEM1	YAL048C	YHL008C	P38750	627 aa		5.25	□□□□□ -1.57
GEM1	YAL048C	YGR122W	P53272	402 aa		5.25	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms