RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 CLCN1P35523 988 aa17.47■□□□□ 0.39
UBE3A-209ENST00000625778 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
UBE3A-209ENST00000625778 NUP160Q12769 1436 aa17.46■□□□□ 0.39
UBE3A-209ENST00000625778 ESPNB1AK53 854 aa17.46■□□□□ 0.39
UBE3A-209ENST00000625778 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
UBE3A-209ENST00000625778 EIF2AK4Q9P2K8 1649 aaKnown RBP17.45■□□□□ 0.38
UBE3A-209ENST00000625778 EXOSC9Q06265 439 aaKnown RBP17.45■□□□□ 0.38
UBE3A-209ENST00000625778 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
UBE3A-209ENST00000625778 ERBB4Q15303 1308 aa17.45■□□□□ 0.38
UBE3A-209ENST00000625778 TMEM132EQ6IEE7 984 aa17.44■□□□□ 0.38
UBE3A-209ENST00000625778 KIF3BO15066 747 aa17.44■□□□□ 0.38
UBE3A-209ENST00000625778 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
UBE3A-209ENST00000625778 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
UBE3A-209ENST00000625778 ABCA8O94911 1581 aa17.43■□□□□ 0.38
UBE3A-209ENST00000625778 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
UBE3A-209ENST00000625778 DDX11L8A8MPP1 907 aa17.43■□□□□ 0.38
UBE3A-209ENST00000625778 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
UBE3A-209ENST00000625778 TNPO1Q92973 898 aaKnown RBP17.43■□□□□ 0.38
UBE3A-209ENST00000625778 GAS2L3Q86XJ1 694 aa17.42■□□□□ 0.38
UBE3A-209ENST00000625778 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
UBE3A-209ENST00000625778 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
UBE3A-209ENST00000625778 TRIM27P14373 513 aa17.42■□□□□ 0.38
UBE3A-209ENST00000625778 ARHGEF5Q12774 1597 aa17.41■□□□□ 0.38
UBE3A-209ENST00000625778 ABCC2Q92887 1545 aa17.41■□□□□ 0.38
UBE3A-209ENST00000625778 NOB1Q9ULX3 412 aaKnown RBP17.41■□□□□ 0.38
UBE3A-209ENST00000625778 SSH1Q8WYL5 1049 aa17.4■□□□□ 0.38
UBE3A-209ENST00000625778 C1orf115Q9H7X2 142 aa17.4■□□□□ 0.38
UBE3A-209ENST00000625778 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
UBE3A-209ENST00000625778 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
UBE3A-209ENST00000625778 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
UBE3A-209ENST00000625778 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
UBE3A-209ENST00000625778 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
UBE3A-209ENST00000625778 WDR63Q8IWG1 891 aa17.39■□□□□ 0.37
UBE3A-209ENST00000625778 CLASP1Q7Z460 1538 aa17.38■□□□□ 0.37
UBE3A-209ENST00000625778 GBP4Q96PP9 640 aa17.38■□□□□ 0.37
UBE3A-209ENST00000625778 SYNMO15061 1565 aa17.38■□□□□ 0.37
UBE3A-209ENST00000625778 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
UBE3A-209ENST00000625778 ANKRD45Q5TZF3 282 aa17.37■□□□□ 0.37
UBE3A-209ENST00000625778 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
UBE3A-209ENST00000625778 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
UBE3A-209ENST00000625778 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
UBE3A-209ENST00000625778 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
UBE3A-209ENST00000625778 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
UBE3A-209ENST00000625778 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
UBE3A-209ENST00000625778 LAMC1P11047 1609 aa17.35■□□□□ 0.37
UBE3A-209ENST00000625778 SSFA2P28290 1259 aa17.34■□□□□ 0.37
UBE3A-209ENST00000625778 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
UBE3A-209ENST00000625778 ANP32BQ92688 251 aaKnown RBP17.34■□□□□ 0.37
UBE3A-209ENST00000625778 CDC42BPBQ9Y5S2 1711 aa17.34■□□□□ 0.37
UBE3A-209ENST00000625778 ERVK-7P63135 1459 aa17.34■□□□□ 0.37
UBE3A-209ENST00000625778 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
UBE3A-209ENST00000625778 TRAPPC8Q9Y2L5 1435 aa17.33■□□□□ 0.37
UBE3A-209ENST00000625778 GGNBP2Q9H3C7 697 aa17.33■□□□□ 0.37
UBE3A-209ENST00000625778 AAMPQ13685 434 aa17.33■□□□□ 0.36
UBE3A-209ENST00000625778 ZNF692Q9BU19 519 aaPredicted RBP17.33■□□□□ 0.36
UBE3A-209ENST00000625778 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
UBE3A-209ENST00000625778 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
UBE3A-209ENST00000625778 UNC13BO14795 1591 aa17.31■□□□□ 0.36
UBE3A-209ENST00000625778 TTC37Q6PGP7 1564 aa17.31■□□□□ 0.36
UBE3A-209ENST00000625778 KIAA1211Q6ZU35 1233 aa17.31■□□□□ 0.36
UBE3A-209ENST00000625778 PRDM10Q9NQV6 1147 aa17.31■□□□□ 0.36
UBE3A-209ENST00000625778 MADDQ8WXG6 1647 aa17.31■□□□□ 0.36
UBE3A-209ENST00000625778 NASPP49321 788 aaPredicted RBP17.31■□□□□ 0.36
UBE3A-209ENST00000625778 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
UBE3A-209ENST00000625778 STK26Q9P289 416 aa17.3■□□□□ 0.36
UBE3A-209ENST00000625778 RIPK4P57078 832 aa17.3■□□□□ 0.36
UBE3A-209ENST00000625778 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
UBE3A-209ENST00000625778 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
UBE3A-209ENST00000625778 APBB1O00213 710 aa17.3■□□□□ 0.36
UBE3A-209ENST00000625778 FOXD4L5Q5VV16 416 aaPredicted RBP17.3■□□□□ 0.36
UBE3A-209ENST00000625778 FOXD4L4Q8WXT5 416 aaPredicted RBP17.3■□□□□ 0.36
UBE3A-209ENST00000625778 ATP10AO60312 1499 aa17.3■□□□□ 0.36
UBE3A-209ENST00000625778 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
UBE3A-209ENST00000625778 CHD1LQ86WJ1 897 aa17.29■□□□□ 0.36
UBE3A-209ENST00000625778 KANK1Q14678 1352 aa17.29■□□□□ 0.36
UBE3A-209ENST00000625778 RTEL1-TNFRSF6BF6WH68 1400 aa17.29■□□□□ 0.36
UBE3A-209ENST00000625778 UGGT1Q9NYU2 1555 aa17.29■□□□□ 0.36
UBE3A-209ENST00000625778 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
UBE3A-209ENST00000625778 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
UBE3A-209ENST00000625778 PREX2Q70Z35 1606 aa17.28■□□□□ 0.36
UBE3A-209ENST00000625778 SCAPERQ9BY12 1400 aa17.28■□□□□ 0.36
UBE3A-209ENST00000625778 PDE4CQ08493 712 aa17.28■□□□□ 0.36
UBE3A-209ENST00000625778 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
UBE3A-209ENST00000625778 RNF17Q9BXT8 1623 aaKnown RBP17.28■□□□□ 0.36
UBE3A-209ENST00000625778 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
UBE3A-209ENST00000625778 MCTP1Q6DN14 999 aa17.28■□□□□ 0.36
UBE3A-209ENST00000625778 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
UBE3A-209ENST00000625778 VIRMAQ69YN4 1812 aaKnown RBP17.27■□□□□ 0.36
UBE3A-209ENST00000625778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.27■□□□□ 0.364e-7■□□□□ 10.3
UBE3A-209ENST00000625778 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
UBE3A-209ENST00000625778 TPRNQ4KMQ1 711 aa17.26■□□□□ 0.35
UBE3A-209ENST00000625778 CAVIN1Q6NZI2 390 aaKnown RBP17.26■□□□□ 0.35
UBE3A-209ENST00000625778 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
UBE3A-209ENST00000625778 KDM5AP29375 1690 aaKnown RBP17.26■□□□□ 0.35
UBE3A-209ENST00000625778 SRPK2P78362 688 aaKnown RBP17.26■□□□□ 0.35
UBE3A-209ENST00000625778 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
UBE3A-209ENST00000625778 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
UBE3A-209ENST00000625778 FBLN1P23142 703 aa17.25■□□□□ 0.35
UBE3A-209ENST00000625778 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
UBE3A-209ENST00000625778 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms