RNA–Protein interactions for RNA: ENST00000619801.4

CSNK2A1-210, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 3

Gene CSNK2A1, Length 655 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-210ENST00000619801 TOM1O60784 492 aa12.83□□□□□ -0.36
CSNK2A1-210ENST00000619801 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
CSNK2A1-210ENST00000619801 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
CSNK2A1-210ENST00000619801 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
CSNK2A1-210ENST00000619801 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
CSNK2A1-210ENST00000619801 CCER1Q8TC90 406 aaPredicted RBP12.81□□□□□ -0.36
CSNK2A1-210ENST00000619801 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
CSNK2A1-210ENST00000619801 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
CSNK2A1-210ENST00000619801 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
CSNK2A1-210ENST00000619801 SPHKAPQ2M3C7 1700 aa12.79□□□□□ -0.36
CSNK2A1-210ENST00000619801 A2ML1A8K2U0 1454 aa12.79□□□□□ -0.36
CSNK2A1-210ENST00000619801 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
CSNK2A1-210ENST00000619801 TRPM2O94759 1503 aa12.78□□□□□ -0.36
CSNK2A1-210ENST00000619801 SYNMO15061 1565 aa12.78□□□□□ -0.36
CSNK2A1-210ENST00000619801 UGGT1Q9NYU2 1555 aa12.78□□□□□ -0.36
CSNK2A1-210ENST00000619801 ECM2O94769 699 aaPredicted RBP12.78□□□□□ -0.36
CSNK2A1-210ENST00000619801 PSEN1P49768 467 aa12.78□□□□□ -0.36
CSNK2A1-210ENST00000619801 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
CSNK2A1-210ENST00000619801 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
CSNK2A1-210ENST00000619801 NEUROD1Q13562 356 aa12.77□□□□□ -0.37
CSNK2A1-210ENST00000619801 RGL3Q3MIN7 710 aa12.77□□□□□ -0.37
CSNK2A1-210ENST00000619801 LHX8Q68G74 356 aa12.77□□□□□ -0.37
CSNK2A1-210ENST00000619801 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
CSNK2A1-210ENST00000619801 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
CSNK2A1-210ENST00000619801 POLR1AO95602 1720 aaPredicted RBP12.76□□□□□ -0.37
CSNK2A1-210ENST00000619801 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSNK2A1-210ENST00000619801 TXNDC2Q86VQ3 553 aa12.75□□□□□ -0.37
CSNK2A1-210ENST00000619801 CLSPNQ9HAW4 1339 aa12.75□□□□□ -0.37
CSNK2A1-210ENST00000619801 PIK3C2BO00750 1634 aa12.74□□□□□ -0.37
CSNK2A1-210ENST00000619801 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
CSNK2A1-210ENST00000619801 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
CSNK2A1-210ENST00000619801 C7P10643 843 aa12.74□□□□□ -0.37
CSNK2A1-210ENST00000619801 SIN3AQ96ST3 1273 aa12.74□□□□□ -0.37
CSNK2A1-210ENST00000619801 STRCP1A6NGW2 1772 aa12.74□□□□□ -0.37
CSNK2A1-210ENST00000619801 CLTCL1P53675 1640 aa12.73□□□□□ -0.37
CSNK2A1-210ENST00000619801 VGFO15240 615 aaPredicted RBP12.73□□□□□ -0.37
CSNK2A1-210ENST00000619801 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
CSNK2A1-210ENST00000619801 POTEAQ6S8J7 498 aa12.73□□□□□ -0.37
CSNK2A1-210ENST00000619801 BCANQ96GW7 911 aa12.73□□□□□ -0.37
CSNK2A1-210ENST00000619801 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
CSNK2A1-210ENST00000619801 TMEM2Q9UHN6 1383 aa12.72□□□□□ -0.37
CSNK2A1-210ENST00000619801 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
CSNK2A1-210ENST00000619801 RGL2O15211 777 aa12.72□□□□□ -0.37
CSNK2A1-210ENST00000619801 ADGRB3O60242 1522 aa12.72□□□□□ -0.37
CSNK2A1-210ENST00000619801 KIF1BO60333 1816 aa12.72□□□□□ -0.37
CSNK2A1-210ENST00000619801 KDM5AP29375 1690 aaKnown RBP12.71□□□□□ -0.37
CSNK2A1-210ENST00000619801 STAC3Q96MF2 364 aa12.71□□□□□ -0.37
CSNK2A1-210ENST00000619801 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.38
CSNK2A1-210ENST00000619801 MED14O60244 1454 aa12.71□□□□□ -0.38
CSNK2A1-210ENST00000619801 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
CSNK2A1-210ENST00000619801 TMEM131LA2VDJ0 1609 aa12.7□□□□□ -0.38
CSNK2A1-210ENST00000619801 LTKP29376 864 aa12.69□□□□□ -0.38
CSNK2A1-210ENST00000619801 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
CSNK2A1-210ENST00000619801 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
CSNK2A1-210ENST00000619801 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
CSNK2A1-210ENST00000619801 POTEJP0CG39 1038 aa12.68□□□□□ -0.38
CSNK2A1-210ENST00000619801 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
CSNK2A1-210ENST00000619801 SPATA31E1Q6ZUB1 1445 aa12.68□□□□□ -0.38
CSNK2A1-210ENST00000619801 SLIT1O75093 1534 aa12.67□□□□□ -0.38
CSNK2A1-210ENST00000619801 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.67□□□□□ -0.38
CSNK2A1-210ENST00000619801 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
CSNK2A1-210ENST00000619801 NPHP4O75161 1426 aaPredicted RBP12.67□□□□□ -0.38
CSNK2A1-210ENST00000619801 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
CSNK2A1-210ENST00000619801 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
CSNK2A1-210ENST00000619801 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
CSNK2A1-210ENST00000619801 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
CSNK2A1-210ENST00000619801 SRCAPQ6ZRS2 3230 aa12.66□□□□□ -0.38
CSNK2A1-210ENST00000619801 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CSNK2A1-210ENST00000619801 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
CSNK2A1-210ENST00000619801 L3MBTL2Q969R5 705 aa12.65□□□□□ -0.38
CSNK2A1-210ENST00000619801 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
CSNK2A1-210ENST00000619801 SEC24BO95487 1268 aa12.64□□□□□ -0.39
CSNK2A1-210ENST00000619801 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
CSNK2A1-210ENST00000619801 IER5LQ5T953 404 aa12.64□□□□□ -0.39
CSNK2A1-210ENST00000619801 MYO5BQ9ULV0 1848 aa12.64□□□□□ -0.39
CSNK2A1-210ENST00000619801 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
CSNK2A1-210ENST00000619801 PLEKHG1Q9ULL1 1385 aa12.63□□□□□ -0.39
CSNK2A1-210ENST00000619801 SLC26A8Q96RN1 970 aa12.62□□□□□ -0.39
CSNK2A1-210ENST00000619801 XIRP1Q702N8 1843 aaKnown RBP12.62□□□□□ -0.39
CSNK2A1-210ENST00000619801 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
CSNK2A1-210ENST00000619801 ADGRF5Q8IZF2 1346 aa12.62□□□□□ -0.39
CSNK2A1-210ENST00000619801 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
CSNK2A1-210ENST00000619801 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
CSNK2A1-210ENST00000619801 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
CSNK2A1-210ENST00000619801 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
CSNK2A1-210ENST00000619801 PPLO60437 1756 aa12.58□□□□□ -0.4
CSNK2A1-210ENST00000619801 MYOM2P54296 1465 aa12.58□□□□□ -0.4
CSNK2A1-210ENST00000619801 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
CSNK2A1-210ENST00000619801 EFCAB3Q8N7B9 438 aa12.57□□□□□ -0.4
CSNK2A1-210ENST00000619801 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
CSNK2A1-210ENST00000619801 PLCG2P16885 1265 aa12.56□□□□□ -0.4
CSNK2A1-210ENST00000619801 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
CSNK2A1-210ENST00000619801 UPF1Q92900 1129 aaKnown RBP eCLIP12.56□□□□□ -0.48e-9■■■■□ 21.4
CSNK2A1-210ENST00000619801 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
CSNK2A1-210ENST00000619801 PDCD7Q8N8D1 485 aaKnown RBP12.55□□□□□ -0.4
CSNK2A1-210ENST00000619801 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
CSNK2A1-210ENST00000619801 PIK3C2GO75747 1445 aa12.54□□□□□ -0.4
CSNK2A1-210ENST00000619801 KCNA6P17658 529 aa12.54□□□□□ -0.4
CSNK2A1-210ENST00000619801 SETBP1Q9Y6X0 1596 aa12.54□□□□□ -0.4
CSNK2A1-210ENST00000619801 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms